CuGenDBv2

Gene ID	Lsi09G015350
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	paladin
Genome location	chr09:23469042..23470982
RNA-Seq Expression	Lsi09G015350
Synteny	Lsi09G015350
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7013719.1 Paladin [Cucurbita argyrosperma subsp. argyrosperma]

2.6e-45

63.98

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Query:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------
        MAILCIRLG+EA DFASNIPQS+   DLS+A EDGLHAQASEEAA R+GDYRDILSLTRVLM+GPKSKADVDIVI+                        
Subjt:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------

Query:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK
                         RRYFFLITF+SYLYCTK+E+MKF  WMKGRPELGHLCNNLRIDK
Subjt:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK

XP_008458276.1 PREDICTED: paladin [Cucumis melo]

1.2e-45

64.6

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Query:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------
        MAILCIRL  EAD FASNIPQ+MT T+LS+A ED LHAQASEE A +IGDYRDILSLTRVLMYGPKSKADVDIVID                        
Subjt:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------

Query:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK
                         RRYFFLITFRSYLYCTK+EEMKF SWMK RPELGHLCNNLRI K
Subjt:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK

XP_022158705.1 paladin isoform X1 [Momordica charantia]

2.6e-45

63.98

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Query:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------
        MAI+CIRLG EA DFASNIPQSMT  DLS+ACED LH+QASEEAA + GDYRDILSLTRVLMYGPKSKADVDIVI+                        
Subjt:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------

Query:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK
                         RRYFFLITFRSYLYCTK+EE +F SWMK RPELGHLCNNLRIDK
Subjt:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK

XP_022959171.1 paladin isoform X1 [Cucurbita moschata]

2.6e-45

63.98

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Query:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------
        MAILCIRLG+EA DFASNIPQS+   DLS+A EDGLHAQASEEAA R+GDYRDILSLTRVLM+GPKSKADVDIVI+                        
Subjt:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------

Query:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK
                         RRYFFLITF+SYLYCTK+E+MKF  WMKGRPELGHLCNNLRIDK
Subjt:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK

XP_038874639.1 paladin isoform X1 [Benincasa hispida]

5.0e-49

67.08

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Query:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------
        MAILCIRLG EAD FA+NIPQSMT +DLS+AC D LHAQASEEAA RIGDYRDILSLTRVLMYGPKSKADVDIVID                        
Subjt:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------

Query:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK
                         RRYFFLITFRSYLYCTK+EEMKF SWMK RPELGHLCNNLRIDK
Subjt:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB71 Uncharacterized protein

3.1e-44

63.35

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Query:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------
        MAILCIRLG E D FASNI Q+M  T+LS+A ED LHAQASEE A +IGDYRDILSLTRVLMYGPKSKADVDIVID                        
Subjt:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------

Query:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK
                         RRYFFLITFRSYLYCTK+EEMKF SWMK RPELGHLCNNLRI K
Subjt:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK

A0A1S3C832 paladin

5.6e-46

64.6

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Query:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------
        MAILCIRL  EAD FASNIPQ+MT T+LS+A ED LHAQASEE A +IGDYRDILSLTRVLMYGPKSKADVDIVID                        
Subjt:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------

Query:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK
                         RRYFFLITFRSYLYCTK+EEMKF SWMK RPELGHLCNNLRI K
Subjt:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK

A0A6J1DWJ7 paladin isoform X1

1.3e-45

63.98

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Query:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------
        MAI+CIRLG EA DFASNIPQSMT  DLS+ACED LH+QASEEAA + GDYRDILSLTRVLMYGPKSKADVDIVI+                        
Subjt:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------

Query:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK
                         RRYFFLITFRSYLYCTK+EE +F SWMK RPELGHLCNNLRIDK
Subjt:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK

A0A6J1H438 paladin isoform X1

1.3e-45

63.98

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Query:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------
        MAILCIRLG+EA DFASNIPQS+   DLS+A EDGLHAQASEEAA R+GDYRDILSLTRVLM+GPKSKADVDIVI+                        
Subjt:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------

Query:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK
                         RRYFFLITF+SYLYCTK+E+MKF  WMKGRPELGHLCNNLRIDK
Subjt:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK

A0A6J1L094 paladin isoform X1

1.3e-45

63.98

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Query:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------
        MAILCIRLG+EA DFASNIPQS+   DLS+A EDGLHAQASEEAA R+GDYRDILSLTRVLM+GPKSKADVDIVI+                        
Subjt:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------

Query:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK
                         RRYFFLITF+SYLYCTK+E+MKF  WMKGRPELGHLCNNLRIDK
Subjt:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G62010.1 unknown protein

2.9e-26

42.86

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Query:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------
        MAI C+ L    +  A+    S T+       ED   + A +E AL +GDYRDILSL RVL +GP+SK+DVD +++                        
Subjt:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------

Query:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK
                         RRYF+LITFRSYLY T  EEMKF  WMK RPELGHLC+NLRIDK
Subjt:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK

AT3G62010.2 unknown protein

2.9e-26

42.86

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Query:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------
        MAI C+ L    +  A+    S T+       ED   + A +E AL +GDYRDILSL RVL +GP+SK+DVD +++                        
Subjt:  MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVID------------------------

Query:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK
                         RRYF+LITFRSYLY T  EEMKF  WMK RPELGHLC+NLRIDK
Subjt:  -----------------RRYFFLITFRSYLYCTKSEEMKFASWMKGRPELGHLCNNLRIDK

Sequences

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CDS sequence

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mRNA sequence

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ATGGCGATTTTATGTATAAGACTTGGGAGCGAGGCAGATGATTTTGCATCAAATATTCCACAATCCATGACTATTACAGATTTATCTTTTGCATGTGAAGACGGCTTGCA
TGCTCAGGCATCTGAAGAAGCAGCACTCAGAATTGGGGATTATCGTGACATCCTAAGCCTTACACGAGTTCTCATGTACGGTCCTAAGAGTAAAGCAGATGTTGACATTG
TCATTGATAGGCGGTACTTTTTTCTCATCACTTTCAGATCCTACCTCTACTGTACTAAGTCAGAAGAGATGAAATTCGCATCGTGGATGAAGGGACGACCTGAATTGGGT
CATTTATGTAATAACCTCAGAATCGACAAGTAGTTAGAAGAACATGCTTGTAAGATATATTCTTGATTGATCTCCCTTATCCTAAATTGTCGTCTGCCTGTATGAATAGG
CCAATATAATGCAACAGCAAGATTTCTTGTAAAAGTGTGAATAGTGTTTGCCATATGTAGATGGTGGTACGTCAAGATGAAGTCAAACTTAACTATATTTGACAGATTTA
TGATTTACATGTTCAGCCAACTAGACAATAATAGTTACCAAGGAGACCGATGGACTGGTCTTTGATTGGTACGTCCTAATACTCAAAATAATTGCTGTATTGACTGCAAT
GATAAATGGTAATGTCGCCCAAGAACATCTAGAAGCTGCATATTTGTCTACATGAAGCATTTTTTTACTGACGTGGTATTGACTTAAAGGTTGTGGCAGTCAACTGGCGG
ATGTGGAAGAATGTTTGTGCAACATTGAGAGATCTACTAGAGAAACTGCAAGCTCGTTTGTTTGTAATAATCATAAACGTATATTTGCCTTATTTTTTGTGTAATATGCA
CTCTAGAGTCAATTAATATATGTGAAGTCAAAATAAAAATAAATGATGAAAACACTATAGCCATTTGTTTGTGTTGGACAATGACAAATCCAATGTAGCTTTTGGCAAGA
ATTTGTGCTGAAACTAATTTGATCAAAGGAATTTATAACATTGCAGTATAAATGTAATTCTTGGGTAGTTACATTATATAAATGTGGGAAGAATCCATTAGGAGGTGGTT
GAACTGGT

Protein sequence

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MAILCIRLGSEADDFASNIPQSMTITDLSFACEDGLHAQASEEAALRIGDYRDILSLTRVLMYGPKSKADVDIVIDRRYFFLITFRSYLYCTKSEEMKFASWMKGRPELG
HLCNNLRIDK

Lsi09G015350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome