; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G015410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G015410
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:23531432..23533213
RNA-Seq ExpressionLsi09G015410
SyntenyLsi09G015410
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033214.1 uncharacterized protein E6C27_scaffold845G00030 [Cucumis melo var. makuwa]1.1e-7264.76Show/hide
Query:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL
        MFS+ VPHHYIELNVAFQMMPQFFNHFFSNNTH SKI LQP + T+K M E Q+S MS+++ K+L+RL++KF+SPR+EL L+RKFEV  AV ED GN+D 
Subjt:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL

Query:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAP
          FVSIDS QFRH++ ECRDY+V + PT SHV F  EVKE +F +E GECIIEG+ +G   EF  P+YP +++YNITFQ++RVW FKS+ +  GT IIAP
Subjt:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAP

Query:  VGLCAQFVIY
        VGL AQF IY
Subjt:  VGLCAQFVIY

KGN45635.1 hypothetical protein Csa_005498 [Cucumis sativus]2.4e-7065.24Show/hide
Query:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL
        MFS+IVPHH +ELNVAFQMMPQFFN+FFSN THSSKI +QP + T+K M E Q + +S ++LK LDRLVLKF SPRNEL L+RKF +  AVKED+GNIDL
Subjt:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL

Query:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAP
         TFVSIDS+QFR VV  CRDY V +  T SHV F+ E+KE +F RE GECI+EG+ +G  TEF  PIYP ++FYNITF+++RVW FKS+ +  GT I+AP
Subjt:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAP

Query:  VGLCAQFVIY
        VGL A+FVIY
Subjt:  VGLCAQFVIY

XP_008458681.1 PREDICTED: uncharacterized protein LOC103498009 [Cucumis melo]2.1e-5859.72Show/hide
Query:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL
        M SIIV HH ++LNV+FQMMPQFF+HF SN THSSK  +QP Y TLK M ESQ +  S +LL  LD LVLKF+SPRNE  L+RKF  ++A KE+L NID 
Subjt:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL

Query:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFERE-QGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIA
         TFVSIDS QFR ++ +CRDY VS+ P  S V F+ EV++ +F +E  GECI EG      TEF  P YPF++F NI FQS+RVW FKS+ +  GT IIA
Subjt:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFERE-QGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIA

Query:  PVGLCAQFVIY
        PVGL AQF IY
Subjt:  PVGLCAQFVIY

XP_031737295.1 uncharacterized protein LOC101209763 [Cucumis sativus]1.3e-7163.81Show/hide
Query:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL
        MFSI +PHHYIELNVAFQMMPQFFN++FSN TH SK+ LQP + T+K M E Q+S MSL+L K+L+RL++KF+SPR EL L+RKF V  AV ED GN+D 
Subjt:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL

Query:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAP
          FVSIDS QFRH++ ECRDY+V + PT SHV F  EVKEI+F++E+GECIIEG+ +G   EF  P+YP +++YNITFQ++RVW FKS  +  GT IIAP
Subjt:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAP

Query:  VGLCAQFVIY
        VGL AQF IY
Subjt:  VGLCAQFVIY

XP_031744101.1 uncharacterized protein LOC116404781 [Cucumis sativus]2.4e-7065.24Show/hide
Query:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL
        MFS+IVPHH +ELNVAFQMMPQFFN+FFSN THSSKI +QP + T+K M E Q + +S ++LK LDRLVLKF SPRNEL L+RKF +  AVKED+GNIDL
Subjt:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL

Query:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAP
         TFVSIDS+QFR VV  CRDY V +  T SHV F+ E+KE +F RE GECI+EG+ +G  TEF  PIYP ++FYNITF+++RVW FKS+ +  GT I+AP
Subjt:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAP

Query:  VGLCAQFVIY
        VGL A+FVIY
Subjt:  VGLCAQFVIY

TrEMBL top hitse value%identityAlignment
A0A0A0K7E0 Uncharacterized protein1.2e-7065.24Show/hide
Query:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL
        MFS+IVPHH +ELNVAFQMMPQFFN+FFSN THSSKI +QP + T+K M E Q + +S ++LK LDRLVLKF SPRNEL L+RKF +  AVKED+GNIDL
Subjt:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL

Query:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAP
         TFVSIDS+QFR VV  CRDY V +  T SHV F+ E+KE +F RE GECI+EG+ +G  TEF  PIYP ++FYNITF+++RVW FKS+ +  GT I+AP
Subjt:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAP

Query:  VGLCAQFVIY
        VGL A+FVIY
Subjt:  VGLCAQFVIY

A0A1S3C5S9 uncharacterized protein LOC1034969871.9e-4959.88Show/hide
Query:  MHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDLGTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQG
        M E Q+S MS+++ K+L+RL++KF+SPR+EL L+RKFEV  AV ED GN+D   FVSIDS QFRH++ ECRDY+V + PT SHV F  EVKE +F +E G
Subjt:  MHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDLGTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQG

Query:  ECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAPVGLCAQFVIY
        ECIIEG+ +G   EF  P+YP +++YNITFQ++RVW FKS+ +  GT IIAPVGL AQF IY
Subjt:  ECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAPVGLCAQFVIY

A0A1S3C7Y9 uncharacterized protein LOC1034980091.0e-5859.72Show/hide
Query:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL
        M SIIV HH ++LNV+FQMMPQFF+HF SN THSSK  +QP Y TLK M ESQ +  S +LL  LD LVLKF+SPRNE  L+RKF  ++A KE+L NID 
Subjt:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL

Query:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFERE-QGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIA
         TFVSIDS QFR ++ +CRDY VS+ P  S V F+ EV++ +F +E  GECI EG      TEF  P YPF++F NI FQS+RVW FKS+ +  GT IIA
Subjt:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFERE-QGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIA

Query:  PVGLCAQFVIY
        PVGL AQF IY
Subjt:  PVGLCAQFVIY

A0A5D3BV70 Uncharacterized protein4.6e-5163.58Show/hide
Query:  MHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDLGTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQG
        M E Q + +S ++LK LDRLVLKF SPRN+L L+RKF +M AVKED+GNIDL TFVSIDS+QFRHVV+ CRDY V + PT SHV F+ E+ E +F RE G
Subjt:  MHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDLGTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQG

Query:  ECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAPVGLCAQFVIY
        ECI+EG+ +G  TEF  PIYP ++FYNITF+S+RVW FKS+ +  GT I+APVGL A+FVIY
Subjt:  ECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAPVGLCAQFVIY

A0A5D3CM59 Uncharacterized protein5.5e-7364.76Show/hide
Query:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL
        MFS+ VPHHYIELNVAFQMMPQFFNHFFSNNTH SKI LQP + T+K M E Q+S MS+++ K+L+RL++KF+SPR+EL L+RKFEV  AV ED GN+D 
Subjt:  MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDL

Query:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAP
          FVSIDS QFRH++ ECRDY+V + PT SHV F  EVKE +F +E GECIIEG+ +G   EF  P+YP +++YNITFQ++RVW FKS+ +  GT IIAP
Subjt:  GTFVSIDSRQFRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAP

Query:  VGLCAQFVIY
        VGL AQF IY
Subjt:  VGLCAQFVIY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCATAATAGTTCCTCACCATTATATTGAATTAAATGTAGCCTTTCAAATGATGCCTCAATTCTTCAATCACTTCTTCTCCAACAACACTCACTCTTCAAAGAT
CTTCCTTCAACCATTCTACATTACCCTCAAACACATGCATGAATCCCAATTTTCAAGAATGTCTCTCTATCTTCTTAAACATCTTGATCGCTTAGTCCTCAAATTTTTCT
CTCCAAGGAATGAGCTATCCTTGCTTCGTAAATTTGAAGTCATGAGTGCGGTAAAGGAGGATTTGGGAAACATTGATTTGGGAACCTTTGTTTCAATTGATTCACGACAA
TTTAGACACGTTGTAATGGAGTGTCGTGATTATTTGGTTAGTATTATTCCAACAAGTTCACACGTCTTGTTCACTACTGAAGTTAAGGAGATCGTTTTTGAAAGAGAGCA
AGGGGAATGCATAATTGAAGGTATTAGCCAAGGGGTAAATACTGAATTCACATTCCCTATCTATCCATTTAATATCTTTTATAATATCACTTTTCAATCGGAGAGGGTAT
GGTTCTTCAAGTCACTAACTAATAGCCGTGGTACTTTGATCATTGCCCCTGTTGGCCTCTGCGCTCAATTTGTCATCTAT
mRNA sequenceShow/hide mRNA sequence
GCTTGAGAACTTGGATCCTTTTTTGGATGCAATATTGGCTCTACATCGATTTGGTAAAAATGGTACCATTGAATGCTCCCCATCAATGTTCTCCATAATAGTTCCTCACC
ATTATATTGAATTAAATGTAGCCTTTCAAATGATGCCTCAATTCTTCAATCACTTCTTCTCCAACAACACTCACTCTTCAAAGATCTTCCTTCAACCATTCTACATTACC
CTCAAACACATGCATGAATCCCAATTTTCAAGAATGTCTCTCTATCTTCTTAAACATCTTGATCGCTTAGTCCTCAAATTTTTCTCTCCAAGGAATGAGCTATCCTTGCT
TCGTAAATTTGAAGTCATGAGTGCGGTAAAGGAGGATTTGGGAAACATTGATTTGGGAACCTTTGTTTCAATTGATTCACGACAATTTAGACACGTTGTAATGGAGTGTC
GTGATTATTTGGTTAGTATTATTCCAACAAGTTCACACGTCTTGTTCACTACTGAAGTTAAGGAGATCGTTTTTGAAAGAGAGCAAGGGGAATGCATAATTGAAGGTATT
AGCCAAGGGGTAAATACTGAATTCACATTCCCTATCTATCCATTTAATATCTTTTATAATATCACTTTTCAATCGGAGAGGGTATGGTTCTTCAAGTCACTAACTAATAG
CCGTGGTACTTTGATCATTGCCCCTGTTGGCCTCTGCGCTCAATTTGTCATCTAT
Protein sequenceShow/hide protein sequence
MFSIIVPHHYIELNVAFQMMPQFFNHFFSNNTHSSKIFLQPFYITLKHMHESQFSRMSLYLLKHLDRLVLKFFSPRNELSLLRKFEVMSAVKEDLGNIDLGTFVSIDSRQ
FRHVVMECRDYLVSIIPTSSHVLFTTEVKEIVFEREQGECIIEGISQGVNTEFTFPIYPFNIFYNITFQSERVWFFKSLTNSRGTLIIAPVGLCAQFVIY