; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G015460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G015460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:23574448..23575559
RNA-Seq ExpressionLsi09G015460
SyntenyLsi09G015460
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033214.1 uncharacterized protein E6C27_scaffold845G00030 [Cucumis melo var. makuwa]5.4e-9872.58Show/hide
Query:  MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLH
        ML+F +EN D  LDA+++L+RF +NANIE SPSMFS+ VPHHY+ELNVAFQMMPQFFNHFFSNNT H SKI LQPLF T+K MK+YQ +S+S+F+ K L 
Subjt:  MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLH

Query:  RLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLI
        RL+++F SPR DELPLIRKF +  A  ED GN+D   FVSIDS QFRHII ECRDY VRV+PTHSHVRF NE+KEFIF+KE GECIIEGVGKG   EFLI
Subjt:  RLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLI

Query:  PLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG
        P+YPTHV+YNITFQA+R+WLFKS D  GTFI+APVGLFA+F IYFPLG
Subjt:  PLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG

KGN45635.1 hypothetical protein Csa_005498 [Cucumis sativus]4.4e-10880.49Show/hide
Query:  MFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLHRL
        MF +ENLDP LDAI+IL+RFG+NANIECSPSMFS+IVPHH LELNVAFQMMPQFFN+FFSN T H SKI +QPLF T+K+MK+YQITSLS F+LKLL RL
Subjt:  MFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLHRL

Query:  VLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLIPL
        VL+FSSPRN ELPLIRKF + CA KEDMGNIDL TFVSIDSQQFR ++T CRDYFVRV+ THSHVRFSNEIKEFIF++E GECI+EGVGKG+ TEFLIP+
Subjt:  VLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLIPL

Query:  YPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG
        YPTHVFYNITF+A+R+WLFKS D  GTFIVAPVGLFA+FVIYFPLG
Subjt:  YPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG

XP_008458681.1 PREDICTED: uncharacterized protein LOC103498009 [Cucumis melo]2.3e-8066.13Show/hide
Query:  MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLH
        MLMF +EN+DPLLDA++IL+R  +N  I+CSPSM SIIV HH L+LNV+FQMMPQFF+HF SN T H SK L+QPL+ TLK+MK+ QITS S FLL  L 
Subjt:  MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLH

Query:  RLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKE-EGECIIEGVGKGRVTEFL
         LVL+F SPRN E PLIRKFG + AAKE++ NID  TFVSIDS QFR II +CRDYFV V+P HS V+FSNE+++FIF KE  GECI EG      TEFL
Subjt:  RLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKE-EGECIIEGVGKGRVTEFL

Query:  IPLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPL
        IP YP HVF NI FQ++R+WLFKS D  GTFI+APVGLFA+F IY+P+
Subjt:  IPLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPL

XP_031737295.1 uncharacterized protein LOC101209763 [Cucumis sativus]4.6e-9771.37Show/hide
Query:  MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLH
        ML+F +EN D  LDA+++L+RF ++ANIE SPSMFSI +PHHY+ELNVAFQMMPQFFN++FSN T H SK+ LQPLF T+K MK+YQ +S+SLFL K L 
Subjt:  MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLH

Query:  RLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLI
        RL+++F SPR +ELPLIRKFG+  A  ED GN+D   FVSIDS QFRHII ECRDY VRV+PTHSHVRF NE+KE IF KEEGECIIEGVGKG   EFLI
Subjt:  RLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLI

Query:  PLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG
        P+YPTHV+YNITFQA+R+WLFKS+D  GTFI+APVGLFA+F IYFPLG
Subjt:  PLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG

XP_031744101.1 uncharacterized protein LOC116404781 [Cucumis sativus]6.9e-10980.65Show/hide
Query:  MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLH
        MLMF +ENLDP LDAI+IL+RFG+NANIECSPSMFS+IVPHH LELNVAFQMMPQFFN+FFSN T H SKI +QPLF T+K+MK+YQITSLS F+LKLL 
Subjt:  MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLH

Query:  RLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLI
        RLVL+FSSPRN ELPLIRKF + CA KEDMGNIDL TFVSIDSQQFR ++T CRDYFVRV+ THSHVRFSNEIKEFIF++E GECI+EGVGKG+ TEFLI
Subjt:  RLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLI

Query:  PLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG
        P+YPTHVFYNITF+A+R+WLFKS D  GTFIVAPVGLFA+FVIYFPLG
Subjt:  PLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG

TrEMBL top hitse value%identityAlignment
A0A0A0K7E0 Uncharacterized protein2.2e-10880.49Show/hide
Query:  MFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLHRL
        MF +ENLDP LDAI+IL+RFG+NANIECSPSMFS+IVPHH LELNVAFQMMPQFFN+FFSN T H SKI +QPLF T+K+MK+YQITSLS F+LKLL RL
Subjt:  MFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLHRL

Query:  VLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLIPL
        VL+FSSPRN ELPLIRKF + CA KEDMGNIDL TFVSIDSQQFR ++T CRDYFVRV+ THSHVRFSNEIKEFIF++E GECI+EGVGKG+ TEFLIP+
Subjt:  VLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLIPL

Query:  YPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG
        YPTHVFYNITF+A+R+WLFKS D  GTFIVAPVGLFA+FVIYFPLG
Subjt:  YPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG

A0A1S3C5S9 uncharacterized protein LOC1034969873.6e-6372.29Show/hide
Query:  MKQYQITSLSLFLLKLLHRLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEE
        MK+YQ +S+S+F+ K L RL+++F SPR DELPLIRKF +  A  ED GN+D   FVSIDS QFRHII ECRDY VRV+PTHSHVRF NE+KEFIF+KE 
Subjt:  MKQYQITSLSLFLLKLLHRLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEE

Query:  GECIIEGVGKGRVTEFLIPLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG
        GECIIEGVGKG   EFLIP+YPTHV+YNITFQA+R+WLFKS D  GTFI+APVGLFA+F IYFPLG
Subjt:  GECIIEGVGKGRVTEFLIPLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG

A0A1S3C7Y9 uncharacterized protein LOC1034980091.1e-8066.13Show/hide
Query:  MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLH
        MLMF +EN+DPLLDA++IL+R  +N  I+CSPSM SIIV HH L+LNV+FQMMPQFF+HF SN T H SK L+QPL+ TLK+MK+ QITS S FLL  L 
Subjt:  MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLH

Query:  RLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKE-EGECIIEGVGKGRVTEFL
         LVL+F SPRN E PLIRKFG + AAKE++ NID  TFVSIDS QFR II +CRDYFV V+P HS V+FSNE+++FIF KE  GECI EG      TEFL
Subjt:  RLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKE-EGECIIEGVGKGRVTEFL

Query:  IPLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPL
        IP YP HVF NI FQ++R+WLFKS D  GTFI+APVGLFA+F IY+P+
Subjt:  IPLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPL

A0A5D3BV70 Uncharacterized protein6.5e-7381.93Show/hide
Query:  MKQYQITSLSLFLLKLLHRLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEE
        MK+YQITSLS F+LKLL RLVL+FSSPRND LPLIRKF +MCA KEDMGNIDL TFVSIDSQQFRH++  CRDYFVRV+PTHSHVRFSNEI EFIF++E 
Subjt:  MKQYQITSLSLFLLKLLHRLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEE

Query:  GECIIEGVGKGRVTEFLIPLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG
        GECI+EGVGKG+VTEFLIP+YPTHVFYNITF+++R+WLFKS D  GTFIVAPVGLFA+FVIYFPLG
Subjt:  GECIIEGVGKGRVTEFLIPLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG

A0A5D3CM59 Uncharacterized protein2.6e-9872.58Show/hide
Query:  MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLH
        ML+F +EN D  LDA+++L+RF +NANIE SPSMFS+ VPHHY+ELNVAFQMMPQFFNHFFSNNT H SKI LQPLF T+K MK+YQ +S+S+F+ K L 
Subjt:  MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLH

Query:  RLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLI
        RL+++F SPR DELPLIRKF +  A  ED GN+D   FVSIDS QFRHII ECRDY VRV+PTHSHVRF NE+KEFIF+KE GECIIEGVGKG   EFLI
Subjt:  RLVLQFSSPRNDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLI

Query:  PLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG
        P+YPTHV+YNITFQA+R+WLFKS D  GTFI+APVGLFA+F IYFPLG
Subjt:  PLYPTHVFYNITFQAERIWLFKSSDNRGTFIVAPVGLFAKFVIYFPLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATGTTTAGGGTTGAGAACTTGGATCCTCTTTTGGATGCAATATTCATTCTAAATCGATTTGGTAAAAATGCCAACATTGAATGCTCCCCATCAATGTTTTCCAT
AATAGTTCCTCACCATTACCTTGAATTGAATGTAGCCTTTCAAATGATGCCTCAATTCTTCAATCACTTCTTCTCCAACAACACTCACCACCATTCAAAGATCCTTCTTC
AACCATTATTCATTACCCTCAAACAAATGAAACAATATCAAATTACTTCACTCTCCCTCTTTCTTCTTAAACTTCTTCATCGCTTGGTCCTTCAATTTTCCTCTCCAAGG
AATGATGAGCTACCCTTGATTCGTAAATTTGGAATCATGTGTGCGGCAAAGGAGGATATGGGAAACATTGATTTGGGAACCTTTGTTTCAATTGATTCACAACAATTCAG
ACACATTATAACAGAGTGTCGTGATTACTTTGTTAGAGTTAGTCCAACACATTCACACGTCAGATTCTCTAATGAAATTAAGGAGTTCATCTTTTCTAAAGAGGAAGGAG
AATGCATAATTGAAGGTGTTGGGAAAGGGAGAGTAACTGAATTTTTAATCCCTCTCTATCCAACTCATGTTTTTTATAATATCACTTTCCAAGCAGAGAGAATATGGTTG
TTCAAATCATCTGATAATCGTGGTACCTTTATCGTTGCTCCTGTTGGACTCTTTGCTAAATTTGTCATCTATTTTCCTCTTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGATGTTTAGGGTTGAGAACTTGGATCCTCTTTTGGATGCAATATTCATTCTAAATCGATTTGGTAAAAATGCCAACATTGAATGCTCCCCATCAATGTTTTCCAT
AATAGTTCCTCACCATTACCTTGAATTGAATGTAGCCTTTCAAATGATGCCTCAATTCTTCAATCACTTCTTCTCCAACAACACTCACCACCATTCAAAGATCCTTCTTC
AACCATTATTCATTACCCTCAAACAAATGAAACAATATCAAATTACTTCACTCTCCCTCTTTCTTCTTAAACTTCTTCATCGCTTGGTCCTTCAATTTTCCTCTCCAAGG
AATGATGAGCTACCCTTGATTCGTAAATTTGGAATCATGTGTGCGGCAAAGGAGGATATGGGAAACATTGATTTGGGAACCTTTGTTTCAATTGATTCACAACAATTCAG
ACACATTATAACAGAGTGTCGTGATTACTTTGTTAGAGTTAGTCCAACACATTCACACGTCAGATTCTCTAATGAAATTAAGGAGTTCATCTTTTCTAAAGAGGAAGGAG
AATGCATAATTGAAGGTGTTGGGAAAGGGAGAGTAACTGAATTTTTAATCCCTCTCTATCCAACTCATGTTTTTTATAATATCACTTTCCAAGCAGAGAGAATATGGTTG
TTCAAATCATCTGATAATCGTGGTACCTTTATCGTTGCTCCTGTTGGACTCTTTGCTAAATTTGTCATCTATTTTCCTCTTGGCTGACTTATGAAAAATGTAATGTTTTT
ATTTTTTATTTTTTTTATTAGAATATATACATATAATGAAATATATTGTGACTCTTCTCTTTTTGTTGCAAAT
Protein sequenceShow/hide protein sequence
MLMFRVENLDPLLDAIFILNRFGKNANIECSPSMFSIIVPHHYLELNVAFQMMPQFFNHFFSNNTHHHSKILLQPLFITLKQMKQYQITSLSLFLLKLLHRLVLQFSSPR
NDELPLIRKFGIMCAAKEDMGNIDLGTFVSIDSQQFRHIITECRDYFVRVSPTHSHVRFSNEIKEFIFSKEEGECIIEGVGKGRVTEFLIPLYPTHVFYNITFQAERIWL
FKSSDNRGTFIVAPVGLFAKFVIYFPLG