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Lsi09G015500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G015500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:23619294..23621596
RNA-Seq ExpressionLsi09G015500
SyntenyLsi09G015500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458265.1 PREDICTED: uncharacterized protein LOC103497733 [Cucumis melo]1.1e-0937.5Show/hide
Query:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK----------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVW
        + S+++ D G+I + +FVSIDS+QFK IVM+F NIDK                                    +E++    K RPT FFSDLT + +RVW
Subjt:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK----------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVW

Query:  FY-ETTKSNSVIYVPVDLNVKFEIYFPN
        FY  TTK+N VI  P+     F I F N
Subjt:  FY-ETTKSNSVIYVPVDLNVKFEIYFPN

XP_022958852.1 uncharacterized protein LOC111460006 [Cucurbita moschata]5.0e-1038.71Show/hide
Query:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK---------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVWF
        ++ +NQ DVG I+ A FVSI+SQQF+ IV  F N +K                                  E E++     L PTTFF+DLT++  RVW 
Subjt:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK---------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVWF

Query:  YETTKSNSVIYVPVDLNVKFEIYF
        + TT   SVI  P+DLNV+ EIYF
Subjt:  YETTKSNSVIYVPVDLNVKFEIYF

XP_023006015.1 uncharacterized protein LOC111498892 [Cucurbita maxima]1.3e-1037.9Show/hide
Query:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK---------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVWF
        ++ QNQ DVG I+ A FVSIDSQ+F+ ++  FRN++K                                 G  +++     L PTTFF+DL  +  RVW 
Subjt:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK---------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVWF

Query:  YETTKSNSVIYVPVDLNVKFEIYF
        Y TTK  SVI  P+DLNV+ E YF
Subjt:  YETTKSNSVIYVPVDLNVKFEIYF

XP_023547499.1 uncharacterized protein LOC111806419 [Cucurbita pepo subsp. pepo]5.0e-1037.1Show/hide
Query:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK---------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVWF
        ++ +NQ DVG I+ A FVSIDSQ+F+ ++  FRNI+K                                 G  +++     L PTTFF+D   +  RVW 
Subjt:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK---------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVWF

Query:  YETTKSNSVIYVPVDLNVKFEIYF
        Y TTK  SVI  P+DLNV+ E YF
Subjt:  YETTKSNSVIYVPVDLNVKFEIYF

XP_023547578.1 uncharacterized protein LOC111806474 [Cucurbita pepo subsp. pepo]3.8e-1038.71Show/hide
Query:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK---------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVWF
        ++ +NQ DVG I+ A FVSIDSQQFK +V  F N +K                                  + E++     L PTTFF+DLT++  RVW 
Subjt:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK---------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVWF

Query:  YETTKSNSVIYVPVDLNVKFEIYF
        + TT   SVI  P+DLNV+ EIYF
Subjt:  YETTKSNSVIYVPVDLNVKFEIYF

TrEMBL top hitse value%identityAlignment
A0A1S3C7G3 uncharacterized protein LOC1034977335.4e-1037.5Show/hide
Query:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK----------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVW
        + S+++ D G+I + +FVSIDS+QFK IVM+F NIDK                                    +E++    K RPT FFSDLT + +RVW
Subjt:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK----------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVW

Query:  FY-ETTKSNSVIYVPVDLNVKFEIYFPN
        FY  TTK+N VI  P+     F I F N
Subjt:  FY-ETTKSNSVIYVPVDLNVKFEIYFPN

A0A5D3BY47 Uncharacterized protein5.4e-1037.5Show/hide
Query:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK----------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVW
        + S+++ D G+I + +FVSIDS+QFK IVM+F NIDK                                    +E++    K RPT FFSDLT + +RVW
Subjt:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK----------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVW

Query:  FY-ETTKSNSVIYVPVDLNVKFEIYFPN
        FY  TTK+N VI  P+     F I F N
Subjt:  FY-ETTKSNSVIYVPVDLNVKFEIYFPN

A0A6J1H2Z0 uncharacterized protein LOC1114600062.4e-1038.71Show/hide
Query:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK---------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVWF
        ++ +NQ DVG I+ A FVSI+SQQF+ IV  F N +K                                  E E++     L PTTFF+DLT++  RVW 
Subjt:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK---------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVWF

Query:  YETTKSNSVIYVPVDLNVKFEIYF
        + TT   SVI  P+DLNV+ EIYF
Subjt:  YETTKSNSVIYVPVDLNVKFEIYF

A0A6J1KYE0 uncharacterized protein LOC1114993276.8e-0530.33Show/hide
Query:  NQEDVG-NINNARFVSIDSQQFKCIVMKFRNI---------------------------------DKGEDEKITLKRKLRPTTFFSDLTVLTKRVWFYET
        +++DV  NI+ A FVSIDS+ F+ +V +FRNI                                    + ++I     L P+ FF++L+    RVW Y T
Subjt:  NQEDVG-NINNARFVSIDSQQFKCIVMKFRNI---------------------------------DKGEDEKITLKRKLRPTTFFSDLTVLTKRVWFYET

Query:  TKSNSVIYVPVDLNVKFEIYFP
          +   I+ P+D N +FE+YFP
Subjt:  TKSNSVIYVPVDLNVKFEIYFP

A0A6J1KZ10 uncharacterized protein LOC1114988926.4e-1137.9Show/hide
Query:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK---------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVWF
        ++ QNQ DVG I+ A FVSIDSQ+F+ ++  FRN++K                                 G  +++     L PTTFF+DL  +  RVW 
Subjt:  TTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDK---------------------------------GEDEKITLKRKLRPTTFFSDLTVLTKRVWF

Query:  YETTKSNSVIYVPVDLNVKFEIYF
        Y TTK  SVI  P+DLNV+ E YF
Subjt:  YETTKSNSVIYVPVDLNVKFEIYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACTTCAATCCTTCCAAAATGGAAGATTCCACTGAAGGAATTCTGCAATCATCTCAGAAACGGCATCGATTTTTCTACAATGTACTTCAGTCTTTCTCAACAAGAACCAC
CTCTCAAAATCAAGAGGATGTAGGCAACATTAACAATGCAAGATTTGTCTCAATTGATTCACAACAATTCAAATGCATTGTAATGAAGTTTAGAAATATCGACAAAGGTG
AAGACGAAAAGATTACACTTAAGAGAAAGCTTCGTCCCACCACATTTTTTAGTGATTTGACAGTTCTGACAAAAAGGGTATGGTTTTATGAGACAACTAAATCCAATAGT
GTAATCTATGTCCCTGTTGACTTGAATGTTAAATTTGAGATCTATTTCCCGAATTTAATGTGA
mRNA sequenceShow/hide mRNA sequence
TACTTCAATCCTTCCAAAATGGAAGATTCCACTGAAGGAATTCTGCAATCATCTCAGAAACGGCATCGATTTTTCTACAATGTACTTCAGTCTTTCTCAACAAGAACCAC
CTCTCAAAATCAAGAGGATGTAGGCAACATTAACAATGCAAGATTTGTCTCAATTGATTCACAACAATTCAAATGCATTGTAATGAAGTTTAGAAATATCGACAAAGGTG
AAGACGAAAAGATTACACTTAAGAGAAAGCTTCGTCCCACCACATTTTTTAGTGATTTGACAGTTCTGACAAAAAGGGTATGGTTTTATGAGACAACTAAATCCAATAGT
GTAATCTATGTCCCTGTTGACTTGAATGTTAAATTTGAGATCTATTTCCCGAATTTAATGTGA
Protein sequenceShow/hide protein sequence
YFNPSKMEDSTEGILQSSQKRHRFFYNVLQSFSTRTTSQNQEDVGNINNARFVSIDSQQFKCIVMKFRNIDKGEDEKITLKRKLRPTTFFSDLTVLTKRVWFYETTKSNS
VIYVPVDLNVKFEIYFPNLM