; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G015540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G015540
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:23658889..23659889
RNA-Seq ExpressionLsi09G015540
SyntenyLsi09G015540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575166.1 hypothetical protein SDJN03_25805, partial [Cucurbita argyrosperma subsp. sororia]1.3e-6065.31Show/hide
Query:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP
        MLT QVA +EAL  NLLP LHL+ FA+FRFSRS V FTASR +STSCLY QL+IS  FFT+LSTNPNG EE  S LQID+FF A SLTGTD+ ++T LMP
Subjt:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP

Query:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE
        D+   TNLFFT            +GHL YN  LAM P  + +VP++DDGPFVAI AEWFRDIATRL  FNTRIWVTATVS+V FSA +MEF +P E
Subjt:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE

XP_022959070.1 uncharacterized protein LOC111460171 [Cucurbita moschata]1.8e-5964.8Show/hide
Query:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP
        MLT QVA +EAL  NLLP LHL+ FA+FRFSRS V FTASR +STSCLY QL+IS  FFT+LSTNPNG EE  S LQID+FF A SLTGTD+ ++T LMP
Subjt:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP

Query:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE
        D+   TNLFFT            +GHL YN  LAM P  + +VP++DDGPFVAI AEWFRDIATRL  FNTRIWVTATVS+V FSA +MEF +  E
Subjt:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE

XP_023006643.1 uncharacterized protein LOC111499307 [Cucurbita maxima]2.2e-6065.31Show/hide
Query:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP
        MLT QVA +EAL  NLLP LHL+ FA+FRFSRS V FTASR +STSCLY QL+IS  FFT+LSTNPNG EE  S LQID+FF A SLTGTD+ ++T LMP
Subjt:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP

Query:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE
        D    TNLFFT            +GHL YN  LAM P  + +VP++DDGPFVAI AEWFRDIATRL  FNTRIWVTATVS+V FSA +MEF +P E
Subjt:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE

XP_023549245.1 uncharacterized protein LOC111807661 [Cucurbita pepo subsp. pepo]3.7e-6064.8Show/hide
Query:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP
        MLT QVA +EAL  NLLP LHL+ FA+FRFSRS V FTASR +STSCLY QL+IS  FFT+LSTNPNG EE  S LQID+FF A SLTGTD+ ++T L+P
Subjt:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP

Query:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE
        D+   TNLFFT            +GHL YN  LAM P  + +VP++DDGPFVAI AEWFRDIATRL  FNTRIWVTATVS+V FSA +MEF +P E
Subjt:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE

XP_038875056.1 uncharacterized protein LOC120067583 [Benincasa hispida]2.5e-8883.17Show/hide
Query:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP
        MLTMQVAEVEALK+NLLPFLHLSQFANF+FSRS VS TASRPHSTSCLYVQLKIS PFFTLLS NPNGIEEFHSCLQIDDFFLATSLTGTDDR+VTFLMP
Subjt:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP

Query:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTEVHNL
        DDYSFTNLFFTTR          VGHL YN +LAMSPPL+M++P+IDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQV+FSA +MEFKVP E +  
Subjt:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTEVHNL

Query:  FI
         +
Subjt:  FI

TrEMBL top hitse value%identityAlignment
A0A6J1H591 uncharacterized protein LOC1114601718.9e-6064.8Show/hide
Query:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP
        MLT QVA +EAL  NLLP LHL+ FA+FRFSRS V FTASR +STSCLY QL+IS  FFT+LSTNPNG EE  S LQID+FF A SLTGTD+ ++T LMP
Subjt:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP

Query:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE
        D+   TNLFFT            +GHL YN  LAM P  + +VP++DDGPFVAI AEWFRDIATRL  FNTRIWVTATVS+V FSA +MEF +  E
Subjt:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE

A0A6J1HGS5 uncharacterized protein LOC1114641963.2e-4955.1Show/hide
Query:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP
        MLT+QVAEVE LK+NLLP L +S  A+FRFSRS VSFT +  H++S ++ +L++ HPFF LLS+N     EFHSC+QID  FLAT +TGTDDR++T  MP
Subjt:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP

Query:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE
        DD++F+NL FTT           VGHL Y   + M PPL++ V  +  G FVA+ AEWFRD+ATRLS F+T+I VTA  S+V F AA M+F +P E
Subjt:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE

A0A6J1HHS5 uncharacterized protein LOC1114641957.6e-1134.24Show/hide
Query:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP
        M T+Q+  +  L+S+++  L LS  AN R S+  VS T S    +  L    ++  PFFT+ S            L ID   L+  +   DD  +T L+P
Subjt:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP

Query:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIF
           S  +L   TR           G       L   PP DM V + D   FVA+ A   R+IATRLS  N  I+ TA+ SQVIF
Subjt:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIF

A0A6J1KJ04 uncharacterized protein LOC1114944112.4e-4955.1Show/hide
Query:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP
        MLT+QVAEVE LK+NLLP L +S  A+FRFSRS VSFT +  H++S ++ +L++ HPFF LLS+N     EFHSC+QID  FLAT +TGTDDR++T  MP
Subjt:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP

Query:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE
        DD++F+NL FTT           VGHL Y   + M PPL++ V  +  G FVA+ AEWFRD+ATRLS F+T+I VTA  S+V F AA M+F +P E
Subjt:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE

A0A6J1L5I7 uncharacterized protein LOC1114993071.1e-6065.31Show/hide
Query:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP
        MLT QVA +EAL  NLLP LHL+ FA+FRFSRS V FTASR +STSCLY QL+IS  FFT+LSTNPNG EE  S LQID+FF A SLTGTD+ ++T LMP
Subjt:  MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMP

Query:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE
        D    TNLFFT            +GHL YN  LAM P  + +VP++DDGPFVAI AEWFRDIATRL  FNTRIWVTATVS+V FSA +MEF +P E
Subjt:  DDYSFTNLFFTTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTACGATGCAAGTTGCAGAAGTGGAAGCTCTGAAGAGCAATCTTCTTCCATTTCTCCACCTTTCTCAGTTCGCCAATTTCAGATTCTCTCGCTCAATGGTCTCCTT
CACTGCCTCTCGCCCCCATAGCACCTCTTGCCTTTACGTACAGCTCAAAATTTCACACCCTTTCTTCACTCTCTTGTCCACCAATCCCAATGGCATCGAAGAGTTCCACT
CCTGTCTTCAGATCGACGACTTCTTCCTCGCCACCTCCCTCACCGGCACCGACGATCGTATCGTGACCTTTCTTATGCCTGATGATTATTCCTTCACCAACCTCTTTTTC
ACAACTCGTACGTTCATCGAATCTCTTCACAATCTTGGCGTTGGGCATTTACTATATAACGTTTCATTGGCGATGAGTCCTCCCCTTGATATGCATGTGCCTCAAATAGA
TGACGGACCATTTGTCGCCATTACTGCAGAATGGTTCAGAGACATTGCAACAAGATTAAGTGGCTTCAATACTAGAATCTGGGTTACTGCAACGGTTTCACAAGTGATAT
TCTCTGCTGCAATAATGGAATTTAAAGTTCCTACAGAGGTACACAATTTATTTATTCCTTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTACGATGCAAGTTGCAGAAGTGGAAGCTCTGAAGAGCAATCTTCTTCCATTTCTCCACCTTTCTCAGTTCGCCAATTTCAGATTCTCTCGCTCAATGGTCTCCTT
CACTGCCTCTCGCCCCCATAGCACCTCTTGCCTTTACGTACAGCTCAAAATTTCACACCCTTTCTTCACTCTCTTGTCCACCAATCCCAATGGCATCGAAGAGTTCCACT
CCTGTCTTCAGATCGACGACTTCTTCCTCGCCACCTCCCTCACCGGCACCGACGATCGTATCGTGACCTTTCTTATGCCTGATGATTATTCCTTCACCAACCTCTTTTTC
ACAACTCGTACGTTCATCGAATCTCTTCACAATCTTGGCGTTGGGCATTTACTATATAACGTTTCATTGGCGATGAGTCCTCCCCTTGATATGCATGTGCCTCAAATAGA
TGACGGACCATTTGTCGCCATTACTGCAGAATGGTTCAGAGACATTGCAACAAGATTAAGTGGCTTCAATACTAGAATCTGGGTTACTGCAACGGTTTCACAAGTGATAT
TCTCTGCTGCAATAATGGAATTTAAAGTTCCTACAGAGGTACACAATTTATTTATTCCTTGCTAG
Protein sequenceShow/hide protein sequence
MLTMQVAEVEALKSNLLPFLHLSQFANFRFSRSMVSFTASRPHSTSCLYVQLKISHPFFTLLSTNPNGIEEFHSCLQIDDFFLATSLTGTDDRIVTFLMPDDYSFTNLFF
TTRTFIESLHNLGVGHLLYNVSLAMSPPLDMHVPQIDDGPFVAITAEWFRDIATRLSGFNTRIWVTATVSQVIFSAAIMEFKVPTEVHNLFIPC