; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G015850 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G015850
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr09:23972283..23972948
RNA-Seq ExpressionLsi09G015850
SyntenyLsi09G015850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EDO35445.1 predicted protein [Nematostella vectensis]4.7e-0843.62Show/hide
Query:  VVVENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVE
        VVV  G  VV S  V V +G V V  G+VVV  G V V S  VVV +G  VV S  V V  GR VV  G V V    VVV  G V V S   VV  G V 
Subjt:  VVVENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVE

Query:  VGSGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVV--GSGLVVEESGQEVVGNGPVVEENGLVVVGNGL-----GVVVSERGVVVSE
        V SG VVV +    V  + GV  + +GVV + +GVV    G+VV   G  V   G VV   G+VV   G+     GVVV+  GVVV++
Subjt:  VGSGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVV--GSGLVVEESGQEVVGNGPVVEENGLVVVGNGL-----GVVVSERGVVVSE

KAF0299972.1 Signaling mucin HKR1 [Amphibalanus amphitrite]3.6e-0830.91Show/hide
Query:  VENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVEVG
        + +G   +GS    + +GP  ++SG   + SG   + S P  + +G   + S P  + SG   +GSGP ++GS    +++GP ++GS    + SG  ++G
Subjt:  VENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVEVG

Query:  SGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNG
        SG   +GS P ++G+ P   +S    +GSG   +GSG     SG   +G+GP    +G   + NG
Subjt:  SGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNG

KAF8519725.1 hypothetical protein BU17DRAFT_65733 [Hysterangium stoloniferum]1.8e-0742.13Show/hide
Query:  VENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVEVG
        V +G   VGS    V +G   V SG   V SG+  V S    V +G G V S    V SG G VGSG  +VGS +  V +G  +VGS +  V SG+ +VG
Subjt:  VENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVEVG

Query:  SGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNGLGVVVSERGVVVS
        SG+  VGS   +VG+  G   S  G VGSG G VGSG+    SG   VG+G     +G+  VG+G+G V S  G V S
Subjt:  SGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNGLGVVVSERGVVVS

XP_021342634.1 putative per-hexamer repeat protein 5 [Mizuhopecten yessoensis]1.2e-0828.26Show/hide
Query:  VVENGREVVGSRQ--VAVENGPVGVESGQVVVVSGLVGVESEPV-----VVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVV
        ++  G  ++GS    +  + G +G  +G +V  +G++G  +E +     ++V+G G++ S    + SG G++GSG   + S   ++ +G   +G    ++
Subjt:  VVENGREVVGSRQ--VAVENGPVGVESGQVVVVSGLVGVESEPV-----VVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVV

Query:  ESGLVEVGSGLVVVGS---APEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNGLGVVVSER
         SG   +GSG  ++GS     E +G+  G   S  G++GSG G++G G  +  SG E++G+G  +  +G+ ++G+G  ++VS R
Subjt:  ESGLVEVGSGLVVVGS---APEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNGLGVVVSER

XP_028980182.2 caM kinase-like vesicle-associated, like [Esox lucius]2.0e-1952.84Show/hide
Query:  VVENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVEV
        VV +G+ VVGS Q  V +GP  V SG  VV SG   V S   VV +G+GVV S    V SG GVVGSG   VGS   VV +G   VGS   VV SG   V
Subjt:  VVENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVEV

Query:  GSGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNGLGVVVSERGV
        GSG  VVGS    VG+ PG+  S  GVVGSG GVVGSG  V  SG  VVG+GP V  +G  VVG+G GVV S  G+
Subjt:  GSGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNGLGVVVSERGV

TrEMBL top hitse value%identityAlignment
A0A1B6CZN7 Uncharacterized protein (Fragment)8.6e-0842.41Show/hide
Query:  VVVENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVE
        +VV  G EVVGS  V +  G V V  G +VV S +V V    VVV     VVV+  V VE G  VVG G V +G+ +VVV  G + +G+++ VV +G+V 
Subjt:  VVVENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVE

Query:  VGSGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNGLGVVVSERGVVVSELVVREIQPEM
        VG G +VVG +   V    GV      VVG    VVG   VV +SG  VVG   ++E  G+VVV  G GVVV   G VV E+ V  +  E+
Subjt:  VGSGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNGLGVVVSERGVVVSELVVREIQPEM

A0A6A4WAL2 Signaling mucin HKR11.7e-0830.91Show/hide
Query:  VENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVEVG
        + +G   +GS    + +GP  ++SG   + SG   + S P  + +G   + S P  + SG   +GSGP ++GS    +++GP ++GS    + SG  ++G
Subjt:  VENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVEVG

Query:  SGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNG
        SG   +GS P ++G+ P   +S    +GSG   +GSG     SG   +G+GP    +G   + NG
Subjt:  SGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNG

A0A6Q2ZAQ4 CaM kinase-like vesicle-associated, like1.3e-1952.84Show/hide
Query:  VVENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVEV
        VV +G+ VVGS Q  V +GP  V SG  VV SG   V S   VV +G+GVV S    V SG GVVGSG   VGS   VV +G   VGS   VV SG   V
Subjt:  VVENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVEV

Query:  GSGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNGLGVVVSERGV
        GSG  VVGS    VG+ PG+  S  GVVGSG GVVGSG  V  SG  VVG+GP V  +G  VVG+G GVV S  G+
Subjt:  GSGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNGLGVVVSERGV

A0A7J5XBB7 Uncharacterized protein1.5e-0751.08Show/hide
Query:  VVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVEVGSGL--VVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLV
        VV +G GVV S+   V SG GVVGSG   VGS   VV +G   VGS   VV SG   VGSG+   VVGS    VG+  GV  S  GVVGSG GVVGSG  
Subjt:  VVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVEVGSGL--VVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLV

Query:  VEESGQEVVGNGPVVEENGLVVVGNGLGVVVSERGVVVS
            G  V  +G VV   G  VVG+G GV  S  GVV S
Subjt:  VEESGQEVVGNGPVVEENGLVVVGNGLGVVVSERGVVVS

A7SLI6 Predicted protein2.3e-0843.62Show/hide
Query:  VVVENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVE
        VVV  G  VV S  V V +G V V  G+VVV  G V V S  VVV +G  VV S  V V  GR VV  G V V    VVV  G V V S   VV  G V 
Subjt:  VVVENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVENGPVEVGSALAVVESGLVE

Query:  VGSGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVV--GSGLVVEESGQEVVGNGPVVEENGLVVVGNGL-----GVVVSERGVVVSE
        V SG VVV +    V  + GV  + +GVV + +GVV    G+VV   G  V   G VV   G+VV   G+     GVVV+  GVVV++
Subjt:  VGSGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVV--GSGLVVEESGQEVVGNGPVVEENGLVVVGNGL-----GVVVSERGVVVSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGGAGAAGAACCGGGAGGAGGAGGAGGAGATGCAGTTGGAGGTGGTGGAGATTGAACAGGTGGCGGCGGAGAGTTCACTGGTGGTGGTGGAGAATGGACGGGA
GGTGGTGGGGAGTAGACAGGTGGCGGTGGAGAATGGACCGGTGGGGGTGGAGAGTGGACAGGTGGTGGTGGTGAGTGGACTGGTGGGGGTGGAGAGTGAACCGGTGGTGG
TGGTGAATGGACGGGGGGTGGTGGTGAGTGAACCGGTGGCGGTGGAGAGTGGACGGGGGGTGGTGGGGAGTGGACCGGTGGAGGTGGGGAGTGCACTGGTGGTGGTGGAG
AATGGACCGGTGGAGGTGGGGAGTGCACTGGCGGTGGTGGAGAGTGGACTGGTGGAGGTGGGGAGTGGACTGGTGGTGGTGGGGAGTGCACCGGAGGAGGTGGGGAATGA
ACCGGGGGTGGAGGAGAGTGAACAGGGGGTGGTGGGGAGTGGACAGGGGGTGGTGGGGAGTGGACTGGTGGTGGAGGAGAGTGGACAGGAGGTGGTGGGGAATGGACCGG
TGGTGGAGGAGAATGGACTGGTGGTGGTGGGGAATGGACTGGGGGTGGTGGTGAGTGAACGGGGGGTGGTGGTGAGTGAACTGGTGGTTCGGGAGATTCAACCGGAGATG
GACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGGAGAAGAACCGGGAGGAGGAGGAGGAGATGCAGTTGGAGGTGGTGGAGATTGAACAGGTGGCGGCGGAGAGTTCACTGGTGGTGGTGGAGAATGGACGGGA
GGTGGTGGGGAGTAGACAGGTGGCGGTGGAGAATGGACCGGTGGGGGTGGAGAGTGGACAGGTGGTGGTGGTGAGTGGACTGGTGGGGGTGGAGAGTGAACCGGTGGTGG
TGGTGAATGGACGGGGGGTGGTGGTGAGTGAACCGGTGGCGGTGGAGAGTGGACGGGGGGTGGTGGGGAGTGGACCGGTGGAGGTGGGGAGTGCACTGGTGGTGGTGGAG
AATGGACCGGTGGAGGTGGGGAGTGCACTGGCGGTGGTGGAGAGTGGACTGGTGGAGGTGGGGAGTGGACTGGTGGTGGTGGGGAGTGCACCGGAGGAGGTGGGGAATGA
ACCGGGGGTGGAGGAGAGTGAACAGGGGGTGGTGGGGAGTGGACAGGGGGTGGTGGGGAGTGGACTGGTGGTGGAGGAGAGTGGACAGGAGGTGGTGGGGAATGGACCGG
TGGTGGAGGAGAATGGACTGGTGGTGGTGGGGAATGGACTGGGGGTGGTGGTGAGTGAACGGGGGGTGGTGGTGAGTGAACTGGTGGTTCGGGAGATTCAACCGGAGATG
GACTAG
Protein sequenceShow/hide protein sequence
MAVEKNREEEEEMQLEVVEIEQVAAESSLVVVENGREVVGSRQVAVENGPVGVESGQVVVVSGLVGVESEPVVVVNGRGVVVSEPVAVESGRGVVGSGPVEVGSALVVVE
NGPVEVGSALAVVESGLVEVGSGLVVVGSAPEEVGNEPGVEESEQGVVGSGQGVVGSGLVVEESGQEVVGNGPVVEENGLVVVGNGLGVVVSERGVVVSELVVREIQPEM
D