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Lsi09G016230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPLATZ transcription factor family protein
Genome locationchr09:24442457..24442903
RNA-Seq ExpressionLsi09G016230
SyntenyLsi09G016230
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458138.1 PREDICTED: uncharacterized protein LOC103497663 [Cucumis melo]5.2e-2676.83Show/hide
Query:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        M +L   L    +++    CV   DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
Subjt:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

XP_011656872.1 uncharacterized protein LOC101214475 [Cucumis sativus]5.2e-2676.83Show/hide
Query:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        M +L   L    +++    CV   DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
Subjt:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

XP_022964357.1 uncharacterized protein LOC111464390 [Cucurbita moschata]1.2e-2575.61Show/hide
Query:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        M  +   L P  S++    CV   DAKKNEKNIFCFDCSLGICPHCLSSH SHKLLQIRRYVYHDVIRLDDA KLIDCAFVQ
Subjt:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

XP_023000095.1 uncharacterized protein LOC111494393 [Cucurbita maxima]1.5e-2576.83Show/hide
Query:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        M AL   L    S++    CV   DAKKNEKNIFCFDCSLGICPHCLSSH SHKLLQIRRYVYHDVIRLDDA KLIDCAFVQ
Subjt:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

XP_038875076.1 uncharacterized protein LOC120067605 [Benincasa hispida]4.0e-2678.05Show/hide
Query:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        M +L   L    S++    CV   DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
Subjt:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

TrEMBL top hitse value%identityAlignment
A0A0A0KCM1 B box-type domain-containing protein2.5e-2676.83Show/hide
Query:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        M +L   L    +++    CV   DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
Subjt:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

A0A1S3C8E3 uncharacterized protein LOC1034976632.5e-2676.83Show/hide
Query:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        M +L   L    +++    CV   DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
Subjt:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

A0A6J1H7K0 uncharacterized protein LOC1114602951.3e-25100Show/hide
Query:  AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
Subjt:  AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

A0A6J1HHL3 uncharacterized protein LOC1114643905.6e-2675.61Show/hide
Query:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        M  +   L P  S++    CV   DAKKNEKNIFCFDCSLGICPHCLSSH SHKLLQIRRYVYHDVIRLDDA KLIDCAFVQ
Subjt:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

A0A6J1KHE0 uncharacterized protein LOC1114943937.3e-2676.83Show/hide
Query:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        M AL   L    S++    CV   DAKKNEKNIFCFDCSLGICPHCLSSH SHKLLQIRRYVYHDVIRLDDA KLIDCAFVQ
Subjt:  MVALTTHLAPSASQREILQCVC--DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

SwissProt top hitse value%identityAlignment
Q1G3Q4 Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 14.2e-1864.91Show/hide
Query:  AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        AKKNE+N+ C DC   +CPHC+ SH  H+LLQ+RRYVYHDV+RL+D  KLIDC+ VQ
Subjt:  AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

Arabidopsis top hitse value%identityAlignment
AT1G21000.1 PLATZ transcription factor family protein3.9e-1147.46Show/hide
Query:  DAKKNEKNIFCFDCS-LGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        D+ KNE N+FC DC+    C +CL  H  H+++QIRR  YH+V+R+++  K ID A VQ
Subjt:  DAKKNEKNIFCFDCS-LGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

AT1G31040.1 PLATZ transcription factor family protein7.8e-2067.86Show/hide
Query:  KKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        +K+EKN+FC  C L +CPHCL SH SH LLQ+RRYVYHDV+RL D  KLIDC++VQ
Subjt:  KKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

AT2G01818.1 PLATZ transcription factor family protein1.0e-1150Show/hide
Query:  KKNEKNIFCFDCSLGICPHCLS----SHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        +KNEKN+FC DC++ IC HC +    SH  H+ LQI +YVY DVIRL +     DC+ +Q
Subjt:  KKNEKNIFCFDCSLGICPHCLS----SHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

AT2G12646.1 PLATZ transcription factor family protein3.0e-1964.91Show/hide
Query:  AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        AKKNE+N+ C DC   +CPHC+ SH  H+LLQ+RRYVYHDV+RL+D  KLIDC+ VQ
Subjt:  AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ

AT3G60670.1 PLATZ transcription factor family protein2.4e-2170.69Show/hide
Query:  DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ
        D KKNEKNI C DC L ICPHCLSSH+SH+LLQIRRYVY DV+R++D +KL+DC+ +Q
Subjt:  DAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCGCTCACTACCCATCTGGCTCCAAGCGCTTCTCAGCGAGAAATTCTTCAATGCGTGTGTGATGCCAAAAAGAATGAAAAAAACATCTTCTGTTTTGACTGTTC
CCTCGGTATTTGCCCTCACTGCTTGTCTTCTCACTCTTCTCACAAACTCCTCCAGATTAGGCGATATGTGTATCATGATGTGATTCGATTGGACGATGCTACTAAGTTAA
TTGACTGTGCTTTTGTACAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCGCTCACTACCCATCTGGCTCCAAGCGCTTCTCAGCGAGAAATTCTTCAATGCGTGTGTGATGCCAAAAAGAATGAAAAAAACATCTTCTGTTTTGACTGTTC
CCTCGGTATTTGCCCTCACTGCTTGTCTTCTCACTCTTCTCACAAACTCCTCCAGATTAGGCGATATGTGTATCATGATGTGATTCGATTGGACGATGCTACTAAGTTAA
TTGACTGTGCTTTTGTACAA
Protein sequenceShow/hide protein sequence
MVALTTHLAPSASQREILQCVCDAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQ