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Lsi09G016320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016320
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:24626053..24627178
RNA-Seq ExpressionLsi09G016320
SyntenyLsi09G016320
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575224.1 hypothetical protein SDJN03_25863, partial [Cucurbita argyrosperma subsp. sororia]1.6e-6185.5Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDKIKHHHDDSTT
        MVDLQIVCC+CGD+GFPDKLFRC KC NRFQHSYCSNYYSES EPIEVCDWCQCEGRSSSRSHG+SSRRPP T T AAGI+SRS YSGDKIKHHH+DS  
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDKIKHHHDDSTT

Query:  TIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
        T++KGK GGAGS  SPRPTTRRYKLLKDVMC
Subjt:  TIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC

XP_004140491.1 uncharacterized protein LOC101205257 [Cucumis sativus]1.8e-6391.67Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDK-IKHHHDDST
        MVDLQIVCCMCGDIGFPDKLF CNKCRNRFQHSYCSNYYSES EPIEVCDWCQCEGRS+SRSHGSSSRRPPSTGTNA GIM+RSEYSGDK IKHHH DS 
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDK-IKHHHDDST

Query:  TTIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
        T  EKGKHGGAGST SPRPTTRRYKLLKDVMC
Subjt:  TTIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC

XP_008467003.1 PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo]1.9e-6292.54Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRS-SSRSHG-SSSRRPPSTGTNAAGIMSRSEYSGDK-IKHHHDD
        MVDLQIVCCMCGDIGFPDKLF CNKCRNRFQHSYCSNYYSES EPIEVCDWCQCEGRS SSRSHG SSSRRPPSTGTNA GIMSRSEYS DK IKHHHDD
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRS-SSRSHG-SSSRRPPSTGTNAAGIMSRSEYSGDK-IKHHHDD

Query:  STTTIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
        S T  EKGKHGGAGSTPSPRPTTRRYKLLKDVMC
Subjt:  STTTIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC

XP_023006670.1 uncharacterized protein LOC111499326 [Cucurbita maxima]9.7e-6285.5Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDKIKHHHDDSTT
        MVDLQIVCC+CGD+GFPDKLFRC KC NRFQHSYCSNYYSES EPIEVCDWCQCEGRSSSRSHG+SSRRPP T T AAGIMSRS YSGDKIKHHH+D+  
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDKIKHHHDDSTT

Query:  TIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
         ++KGK GGAGS PSPRPTTRRYKLLKDVMC
Subjt:  TIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC

XP_038875571.1 uncharacterized protein LOC120067983 [Benincasa hispida]2.1e-6995.42Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDKIKHHHDDSTT
        MVDLQIVCCMCGDIGFPDKLFRCNKC NRFQHSYCSNYYSES EPIEVCDWCQCEGR+SSRSHGSSSRRPPSTGTNAAG+MSRSEYSG+KIKHHHDDS T
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDKIKHHHDDSTT

Query:  TIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
        TIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
Subjt:  TIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC

TrEMBL top hitse value%identityAlignment
A0A0A0KFQ0 Uncharacterized protein8.5e-6491.67Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDK-IKHHHDDST
        MVDLQIVCCMCGDIGFPDKLF CNKCRNRFQHSYCSNYYSES EPIEVCDWCQCEGRS+SRSHGSSSRRPPSTGTNA GIM+RSEYSGDK IKHHH DS 
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDK-IKHHHDDST

Query:  TTIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
        T  EKGKHGGAGST SPRPTTRRYKLLKDVMC
Subjt:  TTIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC

A0A1S3CSH8 uncharacterized protein LOC1035044139.4e-6392.54Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRS-SSRSHG-SSSRRPPSTGTNAAGIMSRSEYSGDK-IKHHHDD
        MVDLQIVCCMCGDIGFPDKLF CNKCRNRFQHSYCSNYYSES EPIEVCDWCQCEGRS SSRSHG SSSRRPPSTGTNA GIMSRSEYS DK IKHHHDD
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRS-SSRSHG-SSSRRPPSTGTNAAGIMSRSEYSGDK-IKHHHDD

Query:  STTTIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
        S T  EKGKHGGAGSTPSPRPTTRRYKLLKDVMC
Subjt:  STTTIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC

A0A6J1E160 uncharacterized protein LOC1110249976.1e-5478.36Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRR---PPSTGTNAAGIMSRSEYSGDKIKHHHDD
        MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSES EPIEVCDWCQCEGRSSSRSHGSSS++   PP      AGIM+RS+Y+  KIK H +D
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRR---PPSTGTNAAGIMSRSEYSGDKIKHHHDD

Query:  STTTIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
         T   +KGKH G G  PSPRPTTRRYKLLKDVMC
Subjt:  STTTIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC

A0A6J1H4E1 uncharacterized protein LOC1114603011.8e-6185.5Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDKIKHHHDDSTT
        MVDLQIVCC+CGD+GFPDKLFRC KC NRFQHSYCSNYYSES EPIEVCDWCQCEGRSSSRSHG+SSRRPP T T  AGIMSRS YSGDKIKHHH+DS  
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDKIKHHHDDSTT

Query:  TIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
        T++KGK GGAGS  SPRPTTRRYKLLKDVMC
Subjt:  TIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC

A0A6J1L0S8 uncharacterized protein LOC1114993264.7e-6285.5Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDKIKHHHDDSTT
        MVDLQIVCC+CGD+GFPDKLFRC KC NRFQHSYCSNYYSES EPIEVCDWCQCEGRSSSRSHG+SSRRPP T T AAGIMSRS YSGDKIKHHH+D+  
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDKIKHHHDDSTT

Query:  TIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
         ++KGK GGAGS PSPRPTTRRYKLLKDVMC
Subjt:  TIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein4.5e-3353.03Show/hide
Query:  LQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSS---RSHGSSSRRPPSTGTNAAGIMSRSEYS-GDKIKHHHDDST
        ++ VCCMCGD+GF DKLF C  CR RFQHSYCSNYY +  EP E+CDWC+ + R  S   R  GSSS++P S+        +RSEYS G +IK H+++  
Subjt:  LQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSS---RSHGSSSRRPPSTGTNAAGIMSRSEYS-GDKIKHHHDDST

Query:  TTIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
          + KG  G  G   SP+  TRRYKLLKDVMC
Subjt:  TTIEKGKHGGAGSTPSPRPTTRRYKLLKDVMC

AT3G60520.1 unknown protein2.2e-3252.78Show/hide
Query:  MVDLQ-IVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRS----HGSSSRRPPSTGTNAAGIMSRSEYSG--DKIKH
        MVDL+  VCCMCGD+GF DKLF C+KC NRFQHSYCS+YY E  +PI++CDWCQCE +S + +    +G SS+R             RSEYS    +IK 
Subjt:  MVDLQ-IVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRS----HGSSSRRPPSTGTNAAGIMSRSEYSG--DKIKH

Query:  HHDDSTTT------IEKGKHGGAGSTPSPRPTTRRYKLLKDVMC
           + TT+       +KGK G     PSPRP TRRYKLLKDVMC
Subjt:  HHDDSTTT------IEKGKHGGAGSTPSPRPTTRRYKLLKDVMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATCTTCAAATCGTTTGCTGCATGTGCGGCGACATCGGTTTCCCTGACAAGCTCTTCCGCTGTAACAAGTGCCGCAACCGCTTCCAACACTCATACTGCAGTAA
CTATTATAGTGAATCTGTGGAGCCAATTGAGGTGTGTGATTGGTGTCAGTGTGAAGGTCGGAGTTCCTCCAGATCACACGGAAGCTCCTCCCGGAGACCGCCATCGACCG
GTACAAACGCCGCCGGAATCATGAGCCGTTCTGAGTATTCTGGCGACAAAATCAAACACCATCATGATGATTCTACCACCACGATTGAGAAGGGGAAACACGGCGGCGCC
GGTAGTACTCCGTCGCCGAGGCCAACCACGCGGAGGTACAAGCTTCTGAAGGACGTAATGTGCTGA
mRNA sequenceShow/hide mRNA sequence
ACATTTAAAAAAAAAAAAATAGTTAAAACGGATTTATACACCGACTCCAAAAACTTTCAAAGCCCACCACTTTTCTTTTCTTTATATTTAAGTCTCTCTCTCTCTCTCCC
TTCTCTCCTCTTGGTGGTTCATCTTCATCTTCATCTTTGATTAAAATTTCATTTTAGTGTGTTTTTTTTTTCTTCTGAGAAATTGGGTCTGTAAAATTAGAAAAATGGTG
GATCTTCAAATCGTTTGCTGCATGTGCGGCGACATCGGTTTCCCTGACAAGCTCTTCCGCTGTAACAAGTGCCGCAACCGCTTCCAACACTCATACTGCAGTAACTATTA
TAGTGAATCTGTGGAGCCAATTGAGGTGTGTGATTGGTGTCAGTGTGAAGGTCGGAGTTCCTCCAGATCACACGGAAGCTCCTCCCGGAGACCGCCATCGACCGGTACAA
ACGCCGCCGGAATCATGAGCCGTTCTGAGTATTCTGGCGACAAAATCAAACACCATCATGATGATTCTACCACCACGATTGAGAAGGGGAAACACGGCGGCGCCGGTAGT
ACTCCGTCGCCGAGGCCAACCACGCGGAGGTACAAGCTTCTGAAGGACGTAATGTGCTGAAGAAAGGGCGGTGAATAAAACGCAGCGTTTTGATATATGAGCGAATGGGG
TTCGTTTCATTTTCTCTCTATATATAGTTCTTTTTTCTTTATTCTCAAATGTTAATTATTATTATTAATATATATATAATTAAAAAAAAAAAAACGTATATATGTGTATA
TATAATATAGGTTGCTTTTGAGTGTGCGTGGAAACATCTGTAGACTCCATGAATTTTGCTTTGTGTTAAATTAAATATATAAATAAATTATATAGTTTTCACTTTAGATC
TTTAAATAAGAAAA
Protein sequenceShow/hide protein sequence
MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESVEPIEVCDWCQCEGRSSSRSHGSSSRRPPSTGTNAAGIMSRSEYSGDKIKHHHDDSTTTIEKGKHGGA
GSTPSPRPTTRRYKLLKDVMC