; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G016340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiontranscription factor UNE10
Genome locationchr09:24661922..24663653
RNA-Seq ExpressionLsi09G016340
SyntenyLsi09G016340
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR031066 - Basic helix-loop-helix (bHLH) transcription factors ALC-like, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK24759.1 transcription factor UNE10 [Cucumis melo var. makuwa]4.1e-6187.76Show/hide
Query:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC-DQL
        MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQL MA LMAPMGLGM M GMGM LGMDHLNM+A RSGL  GMSPLLHPTAFMPIPTWDGGTC DQL
Subjt:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC-DQL

Query:  QHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG
        QHSPT M+ADPFSTFLACQ QPMTMEAY+RIATM QQLHQH P V G
Subjt:  QHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG

XP_008459727.1 PREDICTED: transcription factor UNE10 [Cucumis melo]4.1e-6187.76Show/hide
Query:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC-DQL
        MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQL MA LMAPMGLGM M GMGM LGMDHLNM+A RSGL  GMSPLLHPTAFMPIPTWDGGTC DQL
Subjt:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC-DQL

Query:  QHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG
        QHSPT M+ADPFSTFLACQ QPMTMEAY+RIATM QQLHQH P V G
Subjt:  QHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG

XP_011656866.1 transcription factor UNE10 [Cucumis sativus]4.1e-6189.04Show/hide
Query:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTCDQLQ
        MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQL MA LMAPMGLGM M GMGM LGMDHLNMMA RSGL  GMSPLLHPTAFMPIPTWDGGT DQLQ
Subjt:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTCDQLQ

Query:  HSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG
        HSPT M+ADPFSTFLACQ QPMTMEAY+RIATMFQQLHQH P V G
Subjt:  HSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG

XP_023547570.1 transcription factor UNE10 [Cucurbita pepo subsp. pepo]6.9e-5381.33Show/hide
Query:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPM-AMQQQLPMASLMA-PMGLGMSMA--GMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC
        MLDEVIEYLKQLQAQ+QMMSR+NMPMMLPM AMQQQLPMASLMA PMGLGM MA  GMGMALG+DHLNMMA+RSGLA GMSP+LHPTAFMP+  WDGGT 
Subjt:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPM-AMQQQLPMASLMA-PMGLGMSMA--GMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC

Query:  DQLQHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG
        DQ Q SP+ MIADP S FLACQ QPMTMEAYSRIATMFQQ++Q  P V G
Subjt:  DQLQHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG

XP_038875721.1 transcription factor UNE10 [Benincasa hispida]5.5e-6691.78Show/hide
Query:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTCDQLQ
        MLDEVIEYLKQLQAQVQMMSRMNMP+MLPMAMQQQLPMASLMAPMGLGM MAGMGM LGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTCD LQ
Subjt:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTCDQLQ

Query:  HSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG
        HSPT MI DPFSTFL+CQPQP+TMEAY+RIATMFQQLHQ PP V G
Subjt:  HSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG

TrEMBL top hitse value%identityAlignment
A0A0A0KCL1 BHLH domain-containing protein2.0e-6189.04Show/hide
Query:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTCDQLQ
        MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQL MA LMAPMGLGM M GMGM LGMDHLNMMA RSGL  GMSPLLHPTAFMPIPTWDGGT DQLQ
Subjt:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTCDQLQ

Query:  HSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG
        HSPT M+ADPFSTFLACQ QPMTMEAY+RIATMFQQLHQH P V G
Subjt:  HSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG

A0A1S3CAX9 transcription factor UNE102.0e-6187.76Show/hide
Query:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC-DQL
        MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQL MA LMAPMGLGM M GMGM LGMDHLNM+A RSGL  GMSPLLHPTAFMPIPTWDGGTC DQL
Subjt:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC-DQL

Query:  QHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG
        QHSPT M+ADPFSTFLACQ QPMTMEAY+RIATM QQLHQH P V G
Subjt:  QHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG

A0A5D3DN77 Transcription factor UNE102.0e-6187.76Show/hide
Query:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC-DQL
        MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQL MA LMAPMGLGM M GMGM LGMDHLNM+A RSGL  GMSPLLHPTAFMPIPTWDGGTC DQL
Subjt:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC-DQL

Query:  QHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG
        QHSPT M+ADPFSTFLACQ QPMTMEAY+RIATM QQLHQH P V G
Subjt:  QHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG

A0A6J1H440 transcription factor UNE10 isoform X16.3e-5280Show/hide
Query:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPM-AMQQQLPMASLMA-PMGLGMSMA--GMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC
        MLDEVIEYLKQLQAQ+QMMSR+NMPMMLPM AMQQQLPMASLMA PMGLGM MA  GMGMALG+DHLNMMA+RS LA GMSP+LHPTAFMP+  WDGGT 
Subjt:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPM-AMQQQLPMASLMA-PMGLGMSMA--GMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC

Query:  DQLQHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG
        DQ Q SP+ MIADP S FLACQ QPMTMEAYSRIAT+FQQ++Q  P V G
Subjt:  DQLQHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG

A0A6J1H666 transcription factor UNE10 isoform X26.3e-5280Show/hide
Query:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPM-AMQQQLPMASLMA-PMGLGMSMA--GMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC
        MLDEVIEYLKQLQAQ+QMMSR+NMPMMLPM AMQQQLPMASLMA PMGLGM MA  GMGMALG+DHLNMMA+RS LA GMSP+LHPTAFMP+  WDGGT 
Subjt:  MLDEVIEYLKQLQAQVQMMSRMNMPMMLPM-AMQQQLPMASLMA-PMGLGMSMA--GMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTC

Query:  DQLQHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG
        DQ Q SP+ MIADP S FLACQ QPMTMEAYSRIAT+FQQ++Q  P V G
Subjt:  DQLQHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVG

SwissProt top hitse value%identityAlignment
Q8GZ38 Transcription factor UNE106.1e-2857.05Show/hide
Query:  MLDEVIEYLKQLQAQVQMMSRMNMP-MMLPMAM--QQQLPMASLMAPMGLGMSMAGMGM-ALGMDHLNMMASRSGLATGMSPLLHPTAFMPI--PTWDGG
        MLDEVIEYLKQLQAQV MMSRMNMP MMLPMAM  QQQL M+ +  PMGLGM   GMGM  LG+  LN M   +  A  +   + P  F+P+  P+WD  
Subjt:  MLDEVIEYLKQLQAQVQMMSRMNMP-MMLPMAM--QQQLPMASLMAPMGLGMSMAGMGM-ALGMDHLNMMASRSGLATGMSPLLHPTAFMPI--PTWDGG

Query:  TCDQLQHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPP
        + D    SP  +I DP S FLAC  QP TMEAYSR+AT++QQ+ Q  PP
Subjt:  TCDQLQHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPP

Arabidopsis top hitse value%identityAlignment
AT4G00050.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.4e-2957.05Show/hide
Query:  MLDEVIEYLKQLQAQVQMMSRMNMP-MMLPMAM--QQQLPMASLMAPMGLGMSMAGMGM-ALGMDHLNMMASRSGLATGMSPLLHPTAFMPI--PTWDGG
        MLDEVIEYLKQLQAQV MMSRMNMP MMLPMAM  QQQL M+ +  PMGLGM   GMGM  LG+  LN M   +  A  +   + P  F+P+  P+WD  
Subjt:  MLDEVIEYLKQLQAQVQMMSRMNMP-MMLPMAM--QQQLPMASLMAPMGLGMSMAGMGM-ALGMDHLNMMASRSGLATGMSPLLHPTAFMPI--PTWDGG

Query:  TCDQLQHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPP
        + D    SP  +I DP S FLAC  QP TMEAYSR+AT++QQ+ Q  PP
Subjt:  TCDQLQHSPTNMIADPFSTFLACQPQPMTMEAYSRIATMFQQLHQHPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGATGAAGTAATAGAATATTTGAAGCAATTGCAAGCTCAAGTGCAAATGATGAGTAGAATGAACATGCCAATGATGCTACCAATGGCGATGCAACAACAACTTCC
AATGGCGTCGTTGATGGCCCCGATGGGGTTAGGAATGAGCATGGCGGGGATGGGAATGGCTTTGGGAATGGACCATTTGAACATGATGGCGAGTCGCTCTGGCCTCGCTA
CTGGGATGTCTCCGCTCCTCCACCCGACTGCCTTCATGCCTATCCCGACATGGGACGGAGGCACCTGTGACCAACTTCAACATTCTCCGACCAACATGATTGCAGACCCT
TTTTCGACATTTCTTGCATGTCAACCACAGCCTATGACAATGGAAGCATACAGTAGAATTGCCACGATGTTTCAGCAGCTGCATCAACATCCACCCCCGGTGGTGGGTGG
TTGTCGCCAATCCCTAATCCCGAGCCCTGTCCATCAACTGCCAACTGTCGAAGTGGTTGCTTGTCATTGGTCTTCAGTCGTGGATGTTGGTGCTATAAAGACTAGGTCGT
TAATCAACAATCAAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGATGAAGTAATAGAATATTTGAAGCAATTGCAAGCTCAAGTGCAAATGATGAGTAGAATGAACATGCCAATGATGCTACCAATGGCGATGCAACAACAACTTCC
AATGGCGTCGTTGATGGCCCCGATGGGGTTAGGAATGAGCATGGCGGGGATGGGAATGGCTTTGGGAATGGACCATTTGAACATGATGGCGAGTCGCTCTGGCCTCGCTA
CTGGGATGTCTCCGCTCCTCCACCCGACTGCCTTCATGCCTATCCCGACATGGGACGGAGGCACCTGTGACCAACTTCAACATTCTCCGACCAACATGATTGCAGACCCT
TTTTCGACATTTCTTGCATGTCAACCACAGCCTATGACAATGGAAGCATACAGTAGAATTGCCACGATGTTTCAGCAGCTGCATCAACATCCACCCCCGGTGGTGGGTGG
TTGTCGCCAATCCCTAATCCCGAGCCCTGTCCATCAACTGCCAACTGTCGAAGTGGTTGCTTGTCATTGGTCTTCAGTCGTGGATGTTGGTGCTATAAAGACTAGGTCGT
TAATCAACAATCAAAATTAG
Protein sequenceShow/hide protein sequence
MLDEVIEYLKQLQAQVQMMSRMNMPMMLPMAMQQQLPMASLMAPMGLGMSMAGMGMALGMDHLNMMASRSGLATGMSPLLHPTAFMPIPTWDGGTCDQLQHSPTNMIADP
FSTFLACQPQPMTMEAYSRIATMFQQLHQHPPPVVGGCRQSLIPSPVHQLPTVEVVACHWSSVVDVGAIKTRSLINNQN