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Lsi09G016400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMajor centromere autoantigen B
Genome locationchr09:24714521..24718293
RNA-Seq ExpressionLsi09G016400
SyntenyLsi09G016400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039742.1 hypothetical protein E6C27_scaffold122G00020 [Cucumis melo var. makuwa]4.5e-8767.61Show/hide
Query:  LVVLDKDVVENENPEEEEAANGEDELKFWEELEEREFWNGEVDVDDEDDANKFEAET-----EEDAPKGLDPNKVEPALPED-VDVPNRGELEAEAAAAE
        LVVLDK +V NENP E EAANGEDE+KFWEELEERE WNGE+   D+DDANKFE ET     EEDAPKGLDPNK EP LPED  DVPNR   E E A AE
Subjt:  LVVLDKDVVENENPEEEEAANGEDELKFWEELEEREFWNGEVDVDDEDDANKFEAET-----EEDAPKGLDPNKVEPALPED-VDVPNRGELEAEAAAAE

Query:  APNNADPGLVVDADVPNNGALEVVAEDTPPNKDGA-EAPADGAAPNKGVDELP-EDGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNKGADELPEDEA
        APNNADP L  DA VPNNGALEVVAED PPNKDGA +APADGAAPNKG DE+P E+ RAP EG +E+PE+G APN GA ELP    APNK ADE+PE+EA
Subjt:  APNNADPGLVVDADVPNNGALEVVAEDTPPNKDGA-EAPADGAAPNKGVDELP-EDGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNKGADELPEDEA

Query:  APNTGADELPEDRAAPNKDADEFPDEDEAPNPKEVNPPEDEETPNKEEAEVAE-----EEEAPVEAAGREKGKGEEVEEGKEEEPKPKEEEEAG------
        APN G              A+EF DEDEAPNPKE+NP EDEETPNK+EAE AE     EE+APVEA  REK KGEEVEE KEEEPKPKEEEE G      
Subjt:  APNTGADELPEDRAAPNKDADEFPDEDEAPNPKEVNPPEDEETPNKEEAEVAE-----EEEAPVEAAGREKGKGEEVEEGKEEEPKPKEEEEAG------

Query:  ----------LEEEEDERDKGDDDADDDPKEKAEVDPNEKPVAEENGEEEED
                   EEEED+RDKG+    DDPKEK  VDP EKPV EENGEEEED
Subjt:  ----------LEEEEDERDKGDDDADDDPKEKAEVDPNEKPVAEENGEEEED

PON61197.1 hypothetical protein PanWU01x14_147870 [Parasponia andersonii]1.9e-0837.1Show/hide
Query:  EPIALDEEAVLVTPKPVNELTAPEEEAEGAEGVPNEKLEELVEADVRE-EEDAVV----TLVVLDK-DVVENENPEEEEAA-NGEDELKFWEELEEREFW
        E +A D++A+     P  +  A  EE    +  PNEKLEELVE +V E  E+AVV    ++V   K ++VENE PEE+EAA  GE  ++F  EL   +F 
Subjt:  EPIALDEEAVLVTPKPVNELTAPEEEAEGAEGVPNEKLEELVEADVRE-EEDAVV----TLVVLDK-DVVENENPEEEEAA-NGEDELKFWEELEEREFW

Query:  N-----------------GEVDVDDEDDANKFEAE--TEEDAPK----GLDPNKVEPALPEDVDVPNRGELEAEAAAAEAPNNADPGLVVDADVPNNGAL
        N                 GE + +  DD NK  AE   +E  P     GLDPN+  P L  + DVPNRGELEAE AA +A   A         V NNG L
Subjt:  N-----------------GEVDVDDEDDANKFEAE--TEEDAPK----GLDPNKVEPALPEDVDVPNRGELEAEAAAAEAPNNADPGLVVDADVPNNGAL

Query:  EVVAEDTPPNKDGAEAPADGAAPNKGVDELPEDGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNKGADELPEDEAAPNTGADELPEDRAAPNKDADEF
        E+         D AE    G A   GVD++  +   PN      P E   PNK   +  EDE APNK   +  EDEA    G D   ++  APN+   + 
Subjt:  EVVAEDTPPNKDGAEAPADGAAPNKGVDELPEDGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNKGADELPEDEAAPNTGADELPEDRAAPNKDADEF

Query:  PDEDEAPNPKEVNPPEDEETPNKEEAEVAEEEEAPVEAAGREKGKGEEVEEGKEEEP----KPKEEEEAGLEEEEDERDKGDDDADDDPKEKAEVDPNEK
          E EAPN   V+   DE  P +    V EE+  P +    E G G   EE +E++     K K E E G EE   E D  D   + DP    E DPNE 
Subjt:  PDEDEAPNPKEVNPPEDEETPNKEEAEVAEEEEAPVEAAGREKGKGEEVEEGKEEEP----KPKEEEEAGLEEEEDERDKGDDDADDDPKEKAEVDPNEK

Query:  PVAEENGEEEEDWEEDD-------PKAKPDISID
          +E+  E+EE+ EED+       P  KPDI  D
Subjt:  PVAEENGEEEEDWEEDD-------PKAKPDISID

PON85590.1 hypothetical protein TorRG33x02_185920 [Trema orientale]9.7e-0537.83Show/hide
Query:  EPIALDEEAVLVTPKPVNELTAPEEEAEGAEGVPNEKLEELVEADVRE-EEDAVV----TLVVLDK-DVVENENPEEEEAA-NGEDELKFWEELEEREFW
        E +A D++A+     P  +  A  EE    +  PNEKLEELVE +V E  E+AVV    ++V   K ++VENE PEE+EAA  GE  ++F  E    +F 
Subjt:  EPIALDEEAVLVTPKPVNELTAPEEEAEGAEGVPNEKLEELVEADVRE-EEDAVV----TLVVLDK-DVVENENPEEEEAA-NGEDELKFWEELEEREFW

Query:  NGEVDVDDEDDANKFEAETEEDAPKGL--DPNKVEPALPEDVDVPNRGELEAEAAAAEAPNNADPGLVVDADVPNNGAL--EVVAEDTPPNKDGAEAPAD
        N  V   ++++  +   E EE+A +    DPNK    L  D  VPNR            PN+  P LV + DVPN G L  E+ AE   P     EA A+
Subjt:  NGEVDVDDEDDANKFEAETEEDAPKGL--DPNKVEPALPEDVDVPNRGELEAEAAAAEAPNNADPGLVVDADVPNNGAL--EVVAEDTPPNKDGAEAPAD

Query:  GAAPNKGVDELPE--DGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNK-GADELPEDEAAPNTGADELPEDRAAPNKDADEFPDEDEAPNPKEV----
                DE  E   G A   G  EV  E V PN+     P ++  PNK G DE      APN    +  ED  APNKD  E  D DEAPN   V    
Subjt:  GAAPNKGVDELPE--DGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNK-GADELPEDEAAPNTGADELPEDRAAPNKDADEFPDEDEAPNPKEV----

Query:  --NPPEDEETPNKEEAEVAEEEEAPVEAAGREKGKGEEVEEGKEEEPKPKEEEEAGLEEEEDERDKGDDDADDDPKEKAEVDPNEK--PVAEENGEEEED
             E++  PNK EA     EE     A  E    +EV EGKE     K E E G EE   E D  D   + DP    E DPNE      EE  +E+E 
Subjt:  --NPPEDEETPNKEEAEVAEEEEAPVEAAGREKGKGEEVEEGKEEEPKPKEEEEAGLEEEEDERDKGDDDADDDPKEKAEVDPNEK--PVAEENGEEEED

Query:  WE-EDDPKAKPDISIDLRRKRLS
        +E ED P  KPDI  D R + LS
Subjt:  WE-EDDPKAKPDISIDLRRKRLS

TrEMBL top hitse value%identityAlignment
A0A267F393 Uncharacterized protein6.8e-0432.34Show/hide
Query:  PKEPGAWDDEAAVDVLVGNDKEPIALDEEAVLVTPKPVNELTAPEEEAEGAEGVPNE---KLEELVEAD--VREEEDAVVTLVVLDKDVVENENPEEEEA
        P+E     +E   +  V  +K+P    EE V    K   E  A EEE    E V  E   K EE VE +  ++EEEDA       ++DV E E P+EE+ 
Subjt:  PKEPGAWDDEAAVDVLVGNDKEPIALDEEAVLVTPKPVNELTAPEEEAEGAEGVPNE---KLEELVEAD--VREEEDAVVTLVVLDKDVVENENPEEEEA

Query:  ANGEDELKFWEELEEREFWNGEVDVDDEDDANKFEAETEEDAPKGLDPNKVEPALPEDVDVPNRGELEAEAAAAEAPNNAD----PGLVVDADVPNNGAL
           E++LK  E+ EE E    E DV++E+   + + + EE+ P+  D  + E    EDVD   + + E +A   E P   D      L  + D       
Subjt:  ANGEDELKFWEELEEREFWNGEVDVDDEDDANKFEAETEEDAPKGLDPNKVEPALPEDVDVPNRGELEAEAAAAEAPNNAD----PGLVVDADVPNNGAL

Query:  EVVAEDTPPNKDGAEAPADGAAPNKGVDELPEDGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNKGADELPEDEAAPNTGADELPEDRAAPNKDADEF
        E V E+  P ++  E   D   P +  D   E+     E   E P+E     + A+E P++E    + A+E P++E        E  E++    +DA+E 
Subjt:  EVVAEDTPPNKDGAEAPADGAAPNKGVDELPEDGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNKGADELPEDEAAPNTGADELPEDRAAPNKDADEF

Query:  P--DEDEAPNPKEVNPPEDEETPNKEEAEVAEEEEAPVEAAGREKGKGEEVEEGKEEEPKPKEEEEAGLEE-------EEDERDKGDDDADDDPKEKA-E
        P  +ED    PKE    EDEE P ++  E  E+ +   +A   EK K ++V    EEE KPKEEE+A  +E       EE+E+ K ++DA+D  K K  +
Subjt:  P--DEDEAPNPKEVNPPEDEETPNKEEAEVAEEEEAPVEAAGREKGKGEEVEEGKEEEPKPKEEEEAGLEE-------EEDERDKGDDDADDDPKEKA-E

Query:  VDPNEKPVAEENGEEEEDWEEDD------PKAKPDI
        V+  EKP  EE+ E+EE  +EDD      PK   D+
Subjt:  VDPNEKPVAEENGEEEEDWEEDD------PKAKPDI

A0A2P5CJH4 Uncharacterized protein9.1e-0937.1Show/hide
Query:  EPIALDEEAVLVTPKPVNELTAPEEEAEGAEGVPNEKLEELVEADVRE-EEDAVV----TLVVLDK-DVVENENPEEEEAA-NGEDELKFWEELEEREFW
        E +A D++A+     P  +  A  EE    +  PNEKLEELVE +V E  E+AVV    ++V   K ++VENE PEE+EAA  GE  ++F  EL   +F 
Subjt:  EPIALDEEAVLVTPKPVNELTAPEEEAEGAEGVPNEKLEELVEADVRE-EEDAVV----TLVVLDK-DVVENENPEEEEAA-NGEDELKFWEELEEREFW

Query:  N-----------------GEVDVDDEDDANKFEAE--TEEDAPK----GLDPNKVEPALPEDVDVPNRGELEAEAAAAEAPNNADPGLVVDADVPNNGAL
        N                 GE + +  DD NK  AE   +E  P     GLDPN+  P L  + DVPNRGELEAE AA +A   A         V NNG L
Subjt:  N-----------------GEVDVDDEDDANKFEAE--TEEDAPK----GLDPNKVEPALPEDVDVPNRGELEAEAAAAEAPNNADPGLVVDADVPNNGAL

Query:  EVVAEDTPPNKDGAEAPADGAAPNKGVDELPEDGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNKGADELPEDEAAPNTGADELPEDRAAPNKDADEF
        E+         D AE    G A   GVD++  +   PN      P E   PNK   +  EDE APNK   +  EDEA    G D   ++  APN+   + 
Subjt:  EVVAEDTPPNKDGAEAPADGAAPNKGVDELPEDGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNKGADELPEDEAAPNTGADELPEDRAAPNKDADEF

Query:  PDEDEAPNPKEVNPPEDEETPNKEEAEVAEEEEAPVEAAGREKGKGEEVEEGKEEEP----KPKEEEEAGLEEEEDERDKGDDDADDDPKEKAEVDPNEK
          E EAPN   V+   DE  P +    V EE+  P +    E G G   EE +E++     K K E E G EE   E D  D   + DP    E DPNE 
Subjt:  PDEDEAPNPKEVNPPEDEETPNKEEAEVAEEEEAPVEAAGREKGKGEEVEEGKEEEP----KPKEEEEAGLEEEEDERDKGDDDADDDPKEKAEVDPNEK

Query:  PVAEENGEEEEDWEEDD-------PKAKPDISID
          +E+  E+EE+ EED+       P  KPDI  D
Subjt:  PVAEENGEEEEDWEEDD-------PKAKPDISID

A0A5A7T8D7 Major centromere autoantigen B2.2e-8767.61Show/hide
Query:  LVVLDKDVVENENPEEEEAANGEDELKFWEELEEREFWNGEVDVDDEDDANKFEAET-----EEDAPKGLDPNKVEPALPED-VDVPNRGELEAEAAAAE
        LVVLDK +V NENP E EAANGEDE+KFWEELEERE WNGE+   D+DDANKFE ET     EEDAPKGLDPNK EP LPED  DVPNR   E E A AE
Subjt:  LVVLDKDVVENENPEEEEAANGEDELKFWEELEEREFWNGEVDVDDEDDANKFEAET-----EEDAPKGLDPNKVEPALPED-VDVPNRGELEAEAAAAE

Query:  APNNADPGLVVDADVPNNGALEVVAEDTPPNKDGA-EAPADGAAPNKGVDELP-EDGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNKGADELPEDEA
        APNNADP L  DA VPNNGALEVVAED PPNKDGA +APADGAAPNKG DE+P E+ RAP EG +E+PE+G APN GA ELP    APNK ADE+PE+EA
Subjt:  APNNADPGLVVDADVPNNGALEVVAEDTPPNKDGA-EAPADGAAPNKGVDELP-EDGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNKGADELPEDEA

Query:  APNTGADELPEDRAAPNKDADEFPDEDEAPNPKEVNPPEDEETPNKEEAEVAE-----EEEAPVEAAGREKGKGEEVEEGKEEEPKPKEEEEAG------
        APN G              A+EF DEDEAPNPKE+NP EDEETPNK+EAE AE     EE+APVEA  REK KGEEVEE KEEEPKPKEEEE G      
Subjt:  APNTGADELPEDRAAPNKDADEFPDEDEAPNPKEVNPPEDEETPNKEEAEVAE-----EEEAPVEAAGREKGKGEEVEEGKEEEPKPKEEEEAG------

Query:  ----------LEEEEDERDKGDDDADDDPKEKAEVDPNEKPVAEENGEEEED
                   EEEED+RDKG+    DDPKEK  VDP EKPV EENGEEEED
Subjt:  ----------LEEEEDERDKGDDDADDDPKEKAEVDPNEKPVAEENGEEEED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAATAAAACAAAGAAAGTAAAGAACTTACCGAAAGAGCCTGGTGCTTGGGATGATGAAGCAGCAGTTGATGTTTTGGTCGGCAACGATAAGGAACCAATTGCACT
TGATGAAGAAGCCGTGCTTGTGACACCGAAACCAGTAAATGAACTCACAGCACCCGAAGAAGAAGCCGAGGGAGCGGAGGGTGTGCCGAATGAGAAGCTCGAGGAACTAG
TAGAGGCTGATGTAAGAGAAGAAGAAGATGCAGTGGTAACATTAGTAGTTTTGGACAAAGATGTGGTCGAAAATGAAAACCCAGAAGAAGAAGAAGCCGCAAACGGTGAA
GACGAACTCAAATTCTGGGAAGAACTCGAAGAAAGAGAGTTCTGGAATGGAGAAGTCGATGTAGATGATGAAGATGACGCAAACAAGTTTGAAGCGGAAACCGAAGAAGA
TGCACCGAAGGGACTAGACCCAAACAAAGTTGAACCTGCACTTCCTGAAGATGTAGATGTCCCAAACAGGGGGGAGCTAGAAGCAGAAGCCGCGGCAGCAGAAGCGCCAA
ACAACGCTGATCCCGGACTTGTAGTGGATGCAGATGTGCCAAACAATGGTGCACTGGAAGTAGTTGCAGAAGATACCCCACCAAACAAGGACGGAGCCGAGGCCCCGGCA
GATGGAGCAGCCCCAAACAAGGGCGTAGATGAGCTCCCAGAGGACGGAAGAGCCCCAAACGAGGGCACAAGTGAGGTCCCAGAAGAGGGAGTAGCCCCAAACAAGGGCGC
AGATGAGCTCCCAGAGGACGAAGCCGCTCCAAACAAGGGCGCAGATGAGCTCCCAGAGGACGAAGCCGCCCCAAACACGGGCGCAGACGAGCTCCCAGAGGATAGAGCAG
CCCCAAACAAGGACGCAGACGAGTTCCCTGATGAAGATGAAGCCCCAAATCCGAAAGAAGTCAATCCACCTGAGGATGAAGAAACCCCAAACAAGGAAGAAGCTGAAGTT
GCTGAAGAGGAAGAAGCCCCAGTGGAAGCGGCGGGGAGGGAGAAAGGGAAGGGAGAGGAAGTGGAGGAGGGGAAAGAGGAAGAGCCAAAGCCGAAAGAAGAGGAAGAAGC
GGGATTGGAGGAGGAAGAAGATGAAAGAGATAAAGGGGATGATGATGCTGATGATGATCCGAAGGAGAAGGCGGAGGTGGATCCGAATGAGAAACCAGTGGCTGAGGAAA
ATGGAGAAGAAGAAGAAGATTGGGAGGAGGACGATCCGAAGGCGAAACCCGACATCTCGATCGATCTCCGGCGGAAGAGACTGTCAACTGAGGGTTTTAACGGGAATACT
GTCACCTATTGTTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAATAAAACAAAGAAAGTAAAGAACTTACCGAAAGAGCCTGGTGCTTGGGATGATGAAGCAGCAGTTGATGTTTTGGTCGGCAACGATAAGGAACCAATTGCACT
TGATGAAGAAGCCGTGCTTGTGACACCGAAACCAGTAAATGAACTCACAGCACCCGAAGAAGAAGCCGAGGGAGCGGAGGGTGTGCCGAATGAGAAGCTCGAGGAACTAG
TAGAGGCTGATGTAAGAGAAGAAGAAGATGCAGTGGTAACATTAGTAGTTTTGGACAAAGATGTGGTCGAAAATGAAAACCCAGAAGAAGAAGAAGCCGCAAACGGTGAA
GACGAACTCAAATTCTGGGAAGAACTCGAAGAAAGAGAGTTCTGGAATGGAGAAGTCGATGTAGATGATGAAGATGACGCAAACAAGTTTGAAGCGGAAACCGAAGAAGA
TGCACCGAAGGGACTAGACCCAAACAAAGTTGAACCTGCACTTCCTGAAGATGTAGATGTCCCAAACAGGGGGGAGCTAGAAGCAGAAGCCGCGGCAGCAGAAGCGCCAA
ACAACGCTGATCCCGGACTTGTAGTGGATGCAGATGTGCCAAACAATGGTGCACTGGAAGTAGTTGCAGAAGATACCCCACCAAACAAGGACGGAGCCGAGGCCCCGGCA
GATGGAGCAGCCCCAAACAAGGGCGTAGATGAGCTCCCAGAGGACGGAAGAGCCCCAAACGAGGGCACAAGTGAGGTCCCAGAAGAGGGAGTAGCCCCAAACAAGGGCGC
AGATGAGCTCCCAGAGGACGAAGCCGCTCCAAACAAGGGCGCAGATGAGCTCCCAGAGGACGAAGCCGCCCCAAACACGGGCGCAGACGAGCTCCCAGAGGATAGAGCAG
CCCCAAACAAGGACGCAGACGAGTTCCCTGATGAAGATGAAGCCCCAAATCCGAAAGAAGTCAATCCACCTGAGGATGAAGAAACCCCAAACAAGGAAGAAGCTGAAGTT
GCTGAAGAGGAAGAAGCCCCAGTGGAAGCGGCGGGGAGGGAGAAAGGGAAGGGAGAGGAAGTGGAGGAGGGGAAAGAGGAAGAGCCAAAGCCGAAAGAAGAGGAAGAAGC
GGGATTGGAGGAGGAAGAAGATGAAAGAGATAAAGGGGATGATGATGCTGATGATGATCCGAAGGAGAAGGCGGAGGTGGATCCGAATGAGAAACCAGTGGCTGAGGAAA
ATGGAGAAGAAGAAGAAGATTGGGAGGAGGACGATCCGAAGGCGAAACCCGACATCTCGATCGATCTCCGGCGGAAGAGACTGTCAACTGAGGGTTTTAACGGGAATACT
GTCACCTATTGTTACTAA
Protein sequenceShow/hide protein sequence
MDNKTKKVKNLPKEPGAWDDEAAVDVLVGNDKEPIALDEEAVLVTPKPVNELTAPEEEAEGAEGVPNEKLEELVEADVREEEDAVVTLVVLDKDVVENENPEEEEAANGE
DELKFWEELEEREFWNGEVDVDDEDDANKFEAETEEDAPKGLDPNKVEPALPEDVDVPNRGELEAEAAAAEAPNNADPGLVVDADVPNNGALEVVAEDTPPNKDGAEAPA
DGAAPNKGVDELPEDGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNKGADELPEDEAAPNTGADELPEDRAAPNKDADEFPDEDEAPNPKEVNPPEDEETPNKEEAEV
AEEEEAPVEAAGREKGKGEEVEEGKEEEPKPKEEEEAGLEEEEDERDKGDDDADDDPKEKAEVDPNEKPVAEENGEEEEDWEEDDPKAKPDISIDLRRKRLSTEGFNGNT
VTYCY