; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G016450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:24762655..24763583
RNA-Seq ExpressionLsi09G016450
SyntenyLsi09G016450
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458677.1 PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]7.1e-4160Show/hide
Query:  MTLSL--QQPFHHISLQFYNSRI---GQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKE
        MTLSL  QQP   I+LQF N R+    + L     L PSREEDVG+IDYGIF SI+S VF+ IA ELD DF+AL+T+TNS+VKF+   ++I  L+KER E
Subjt:  MTLSL--QQPFHHISLQFYNSRI---GQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKE

Query:  CIIGGLSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQYSQ
        CIIGG+  GEE+RF VYL P + FR +  QS RIW+FKSP S SI VAPI LYAQFCVYF Q  +
Subjt:  CIIGGLSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQYSQ

XP_022964074.1 uncharacterized protein LOC111464210 [Cucurbita moschata]3.3e-4664.1Show/hide
Query:  MTLSLQQPFHHISLQFYNSRIGQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGG
        +TLSL+   + + LQF+NSRIG++  R L L PSRE+DVG+IDYGIF SIDS+VF+RIAT+L +D NAL+T+TNSQVKF+ E +EIS L +ER+EC+IGG
Subjt:  MTLSLQQPFHHISLQFYNSRIGQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGG

Query:  LSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFS
        LS  +E RF V L P IFFR + +QSKRIW+FKS  + SII+API LYAQFCVYFS
Subjt:  LSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFS

XP_023000631.1 uncharacterized protein LOC111494875 [Cucurbita maxima]2.8e-4563.06Show/hide
Query:  MTLSLQQPFHHISLQFYNSRIGQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGG
        +TLSL+   + + LQF+NSRIG++  R L L PSRE+DVG+IDYGIF SIDS+VF+RIAT+L +D NAL+T+TNSQVKF+ E +EIS L +ER+EC+IGG
Subjt:  MTLSLQQPFHHISLQFYNSRIGQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGG

Query:  LSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQ
        LS  +E RF V L P IFFR +  +SKRIW+FKS  + SII+API LYAQFCVYFS+
Subjt:  LSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQ

XP_023514485.1 uncharacterized protein LOC111778745 [Cucurbita pepo subsp. pepo]4.3e-4664.74Show/hide
Query:  MTLSLQQPFHHISLQFYNSRIGQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGG
        +TLSL+   + + LQF+NSRIG++  R L L PSRE+DVG+IDYGIF SIDS+VF+RIAT+L +D  AL+T+TNSQVKFT E +EIS L KER+EC+IGG
Subjt:  MTLSLQQPFHHISLQFYNSRIGQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGG

Query:  LSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFS
        LS  +E RF V L P IFFR +  QSKRIW+FKS  + SII+API LYAQFCVYFS
Subjt:  LSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFS

XP_031744051.1 uncharacterized protein LOC116404769 [Cucumis sativus]7.1e-4160.76Show/hide
Query:  QQPFHHISLQFYNSRIGQQ---LSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGGLS
        QQP + I LQF N R+      L     L PSREEDVG+IDYGIF SIDS V + IATELD D++AL+T+TNS+VKF+   +EIS L+KE  ECIIGG++
Subjt:  QQPFHHISLQFYNSRIGQQ---LSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGGLS

Query:  EGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQYSQ
        + EE+RF VYL P I FR +  +S+RIW+FKSPNS SIIVAPI LYAQFCVYF Q  +
Subjt:  EGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQYSQ

TrEMBL top hitse value%identityAlignment
A0A0A0KCY3 Uncharacterized protein3.4e-4160.76Show/hide
Query:  QQPFHHISLQFYNSRIGQQ---LSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGGLS
        QQP + I LQF N R+      L     L PSREEDVG+IDYGIF SIDS V + IATELD D++AL+T+TNS+VKF+   +EIS L+KE  ECIIGG++
Subjt:  QQPFHHISLQFYNSRIGQQ---LSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGGLS

Query:  EGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQYSQ
        + EE+RF VYL P I FR +  +S+RIW+FKSPNS SIIVAPI LYAQFCVYF Q  +
Subjt:  EGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQYSQ

A0A1S3C8E9 uncharacterized protein LOC1034980053.4e-4160Show/hide
Query:  MTLSL--QQPFHHISLQFYNSRI---GQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKE
        MTLSL  QQP   I+LQF N R+    + L     L PSREEDVG+IDYGIF SI+S VF+ IA ELD DF+AL+T+TNS+VKF+   ++I  L+KER E
Subjt:  MTLSL--QQPFHHISLQFYNSRI---GQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKE

Query:  CIIGGLSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQYSQ
        CIIGG+  GEE+RF VYL P + FR +  QS RIW+FKSP S SI VAPI LYAQFCVYF Q  +
Subjt:  CIIGGLSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQYSQ

A0A6J1HM25 uncharacterized protein LOC1114642101.6e-4664.1Show/hide
Query:  MTLSLQQPFHHISLQFYNSRIGQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGG
        +TLSL+   + + LQF+NSRIG++  R L L PSRE+DVG+IDYGIF SIDS+VF+RIAT+L +D NAL+T+TNSQVKF+ E +EIS L +ER+EC+IGG
Subjt:  MTLSLQQPFHHISLQFYNSRIGQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGG

Query:  LSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFS
        LS  +E RF V L P IFFR + +QSKRIW+FKS  + SII+API LYAQFCVYFS
Subjt:  LSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFS

A0A6J1KGC4 uncharacterized protein LOC1114948751.3e-4563.06Show/hide
Query:  MTLSLQQPFHHISLQFYNSRIGQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGG
        +TLSL+   + + LQF+NSRIG++  R L L PSRE+DVG+IDYGIF SIDS+VF+RIAT+L +D NAL+T+TNSQVKF+ E +EIS L +ER+EC+IGG
Subjt:  MTLSLQQPFHHISLQFYNSRIGQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGG

Query:  LSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQ
        LS  +E RF V L P IFFR +  +SKRIW+FKS  + SII+API LYAQFCVYFS+
Subjt:  LSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQ

A0A6J1KN57 uncharacterized protein LOC1114948713.1e-2642.68Show/hide
Query:  MTLSLQQPFHHISLQFYNSRIGQQLS--RDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECII
        M   L +  + + L+F +S+I  +++  R+L L P     + ++DYG F SIDS  F+ I TEL  D+ A +T+T+SQVKF+   +EI  L K +K+CII
Subjt:  MTLSLQQPFHHISLQFYNSRIGQQLS--RDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECII

Query:  GGLSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYF
        G ++E +E +F++ L+PT+FF  + +QS R+W+FKS NSSS ++ P+ +Y QF VYF
Subjt:  GGLSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACTCTCTCTTCAACAACCCTTTCACCACATCTCCCTTCAATTTTACAATTCAAGGATTGGTCAACAACTCTCTCGTGATTTGCAATTGCAACCTTCAAGAGAGGA
AGATGTAGGCAAAATTGACTATGGAATCTTTGCCTCAATTGATTCACAAGTGTTTAAACGAATTGCAACAGAGTTAGATCATGATTTCAATGCATTGATTACTGTAACGA
ATTCACAAGTGAAATTCACTTTTGAAGGTAGAGAGATAAGTACTCTTCACAAAGAGAGAAAAGAATGCATAATTGGAGGGCTTTCAGAGGGAGAAGAAGCTCGATTCTTA
GTGTACTTAGAGCCCACAATTTTTTTTCGTGGTGTGGTTTATCAGTCAAAAAGGATATGGATATTCAAGTCTCCTAATTCCTCTAGTATAATTGTTGCTCCTATTGAATT
GTATGCTCAATTTTGCGTCTATTTTTCCCAGTATTCTCAAATTGATTTTTATTTACAAATTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGACACTCTCTCTTCAACAACCCTTTCACCACATCTCCCTTCAATTTTACAATTCAAGGATTGGTCAACAACTCTCTCGTGATTTGCAATTGCAACCTTCAAGAGAGGA
AGATGTAGGCAAAATTGACTATGGAATCTTTGCCTCAATTGATTCACAAGTGTTTAAACGAATTGCAACAGAGTTAGATCATGATTTCAATGCATTGATTACTGTAACGA
ATTCACAAGTGAAATTCACTTTTGAAGGTAGAGAGATAAGTACTCTTCACAAAGAGAGAAAAGAATGCATAATTGGAGGGCTTTCAGAGGGAGAAGAAGCTCGATTCTTA
GTGTACTTAGAGCCCACAATTTTTTTTCGTGGTGTGGTTTATCAGTCAAAAAGGATATGGATATTCAAGTCTCCTAATTCCTCTAGTATAATTGTTGCTCCTATTGAATT
GTATGCTCAATTTTGCGTCTATTTTTCCCAGTATTCTCAAATTGATTTTTATTTACAAATTATATAA
Protein sequenceShow/hide protein sequence
MTLSLQQPFHHISLQFYNSRIGQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGGLSEGEEARFL
VYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQYSQIDFYLQII