; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G016460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:24767077..24769157
RNA-Seq ExpressionLsi09G016460
SyntenyLsi09G016460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646787.1 hypothetical protein Csa_005303, partial [Cucumis sativus]8.5e-5169.14Show/hide
Query:  MLTFNIPMKALDDGISIILRVKTYANMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQ-SD
        ML FNIPMKALDDGIS+IL ++   NMKCT KMFS+I+P TPDR FTA+FQM P+FFT FTCNY HYAI  L +LY LMLDMQR GF +LTL+LSE  +D
Subjt:  MLTFNIPMKALDDGISIILRVKTYANMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQ-SD

Query:  FCVVIALEFHTYG--ETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDE
          VV ALEFHTYG  E  SLAMLP F S++EEDVGEIDYTYFVSI+IEDF+ +V+E  ++DE
Subjt:  FCVVIALEFHTYG--ETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDE

XP_022928046.1 uncharacterized protein LOC111434948 [Cucurbita moschata]3.6e-3340.43Show/hide
Query:  ISIILRVKTYANMKCTRKMFSI-IMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSE-QSDFCVVIALEFHTYG
        ISI+ R +  A  KC+  +FSI ++   P   FT   +M P+FF  + C+ LHY  FS+ + Y  +++ +   FSS+TLS++E Q  F +  +     + 
Subjt:  ISIILRVKTYANMKCTRKMFSI-IMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSE-QSDFCVVIALEFHTYG

Query:  ETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNN
         T    ++PT   E + + G IDY  FVS D+  F+ +V  L +++   + +TNSQIKF V    + LTT RKECIIGG A G+E ++++   P +FF N
Subjt:  ETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNN

Query:  FKSERVWFFKSND-HDIMLTAPMGLHTRISSYFPQ
        F SER+W FKS D   + L APMGL+  ISSYFP+
Subjt:  FKSERVWFFKSND-HDIMLTAPMGLHTRISSYFPQ

XP_022959375.1 uncharacterized protein LOC111460364 [Cucurbita moschata]1.7e-3539.2Show/hide
Query:  MLTFNIPMKALDDGISIILRVKTYANMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQSDF
        ML+F++P+ A+++   I+ R+    N K  R M    +  T   CF  +FQM P FFT + C+  H A FS+  L+  + +++++GF + T SL E    
Subjt:  MLTFNIPMKALDDGISIILRVKTYANMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQSDF

Query:  CVVIALEFHTYGETF-SLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQ
        CV +    H  G T  ++  L      DEE + ++DY+ F SID E FK +V  +G  ++V+  LT S+IKF        LT   ++CIIGGI  G+EI+
Subjt:  CVVIALEFHTYGETF-SLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQ

Query:  TSINFDPIDFFNNFKSERVWFFKSND-HDIMLTAPMGLHTRISSYFPQRL
         SI   PI+FFN+F S+R+WFFK+ D +  ++ +PMGLH  I SYFP RL
Subjt:  TSINFDPIDFFNNFKSERVWFFKSND-HDIMLTAPMGLHTRISSYFPQRL

XP_023513336.1 uncharacterized protein LOC111777844 [Cucurbita pepo subsp. pepo]6.8e-3240Show/hide
Query:  ISIILRVKTYANMKCTRKMFSI-IMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSE-QSDFCVVIALEFHTYG
        ISI+ R +  A  KC+  +FSI ++   P   FT   +M P+FF  + C+ LHY  FS+ + Y  +++ +   FSS+TLS++E Q  F +  +     + 
Subjt:  ISIILRVKTYANMKCTRKMFSI-IMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSE-QSDFCVVIALEFHTYG

Query:  ETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNN
         T    ++PT   E   + G IDY  FVS D+  F+ +V  L +++   + +T+SQIKF V    + LTT R ECIIGG A GEE ++++   P +FF N
Subjt:  ETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNN

Query:  FKSERVWFFKSND-HDIMLTAPMGLHTRISSYFPQ
        F SER+W FKS D   + L APMGL+  ISSYFP+
Subjt:  FKSERVWFFKSND-HDIMLTAPMGLHTRISSYFPQ

XP_023547372.1 uncharacterized protein LOC111806340 [Cucurbita pepo subsp. pepo]5.2e-3241.33Show/hide
Query:  NMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQSDFCVVIALEFHTYGETF-SLAMLPTFE
        N K  R M    +  T   CF  +FQM P FFT + C+  H A FS+  L+  + +++++GF + T SL E    CV +    H  G T  ++  L    
Subjt:  NMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQSDFCVVIALEFHTYGETF-SLAMLPTFE

Query:  SEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNNFKSERVWFFKSN
          DEE + ++DY+ F SID E+FK +V  +G  ++V+  LT S+IKF        LT   ++CIIGGI  G+EI+ SI   PI+FFN+F S+RVWFFK+ 
Subjt:  SEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNNFKSERVWFFKSN

Query:  D-HDIMLTAPMGLHTRISSYFPQRL
        D +  ++ +PMGLH  ISSYFP RL
Subjt:  D-HDIMLTAPMGLHTRISSYFPQRL

TrEMBL top hitse value%identityAlignment
A0A0A0KA10 Uncharacterized protein2.1e-5567.6Show/hide
Query:  MKALDDGISIILRVKTYANMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQ-SDFCVVIAL
        MKALDDGIS+IL ++   NMKCT KMFS+I+P TPDR FTA+FQM P+FFT FTCNY HYAI  L +LY LMLDMQR GF +LTL+LSE  +D  VV AL
Subjt:  MKALDDGISIILRVKTYANMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQ-SDFCVVIAL

Query:  EFHTYG--ETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTM
        EFHTYG  E  SLAMLP F S++EEDVGEIDYTYFVSI+IEDF+ +V+E  ++DEV VVLTNS +K S G ++I LTTM
Subjt:  EFHTYG--ETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTM

A0A6J1EJ67 uncharacterized protein LOC1114349481.7e-3340.43Show/hide
Query:  ISIILRVKTYANMKCTRKMFSI-IMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSE-QSDFCVVIALEFHTYG
        ISI+ R +  A  KC+  +FSI ++   P   FT   +M P+FF  + C+ LHY  FS+ + Y  +++ +   FSS+TLS++E Q  F +  +     + 
Subjt:  ISIILRVKTYANMKCTRKMFSI-IMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSE-QSDFCVVIALEFHTYG

Query:  ETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNN
         T    ++PT   E + + G IDY  FVS D+  F+ +V  L +++   + +TNSQIKF V    + LTT RKECIIGG A G+E ++++   P +FF N
Subjt:  ETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNN

Query:  FKSERVWFFKSND-HDIMLTAPMGLHTRISSYFPQ
        F SER+W FKS D   + L APMGL+  ISSYFP+
Subjt:  FKSERVWFFKSND-HDIMLTAPMGLHTRISSYFPQ

A0A6J1G821 uncharacterized protein LOC1114515957.3e-3238.63Show/hide
Query:  ISIILRVKTYANMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQSDFCVVIALEFHTYGET
        +S++ R+   A++K T   F+II+P    RC   A ++ PQFF  F+CN  HY   SL +L T + DM R G + LTLS        +V+  E H   E 
Subjt:  ISIILRVKTYANMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQSDFCVVIALEFHTYGET

Query:  FSLAML--PTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNN
          ++ L  P       +DVGEIDY+ FVSI+++ FK +   L +  E  V +++S+I F VG    TL    ++CIIGG+A+G+EI +S+   P+ F+ N
Subjt:  FSLAML--PTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNN

Query:  FKSERVWFFKS-NDHDIMLTAPMGLHTRISSYF
          S+R+W FKS   + ++L AP+GLH   SSY+
Subjt:  FKSERVWFFKS-NDHDIMLTAPMGLHTRISSYF

A0A6J1H641 uncharacterized protein LOC1114603648.3e-3639.2Show/hide
Query:  MLTFNIPMKALDDGISIILRVKTYANMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQSDF
        ML+F++P+ A+++   I+ R+    N K  R M    +  T   CF  +FQM P FFT + C+  H A FS+  L+  + +++++GF + T SL E    
Subjt:  MLTFNIPMKALDDGISIILRVKTYANMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQSDF

Query:  CVVIALEFHTYGETF-SLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQ
        CV +    H  G T  ++  L      DEE + ++DY+ F SID E FK +V  +G  ++V+  LT S+IKF        LT   ++CIIGGI  G+EI+
Subjt:  CVVIALEFHTYGETF-SLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQ

Query:  TSINFDPIDFFNNFKSERVWFFKSND-HDIMLTAPMGLHTRISSYFPQRL
         SI   PI+FFN+F S+R+WFFK+ D +  ++ +PMGLH  I SYFP RL
Subjt:  TSINFDPIDFFNNFKSERVWFFKSND-HDIMLTAPMGLHTRISSYFPQRL

A0A6J1I7S4 uncharacterized protein LOC1114703853.6e-3139.15Show/hide
Query:  ISIILRVKTYANMKCTRKMFSI-IMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSE-QSDFCVVIALEFHTYG
        ISI+ R +  A  KC+  +FSI ++   P   F    +M P+FF  + C+  HY  FS+ + Y  +++ +   FSSLTLS++E Q  F +  +     + 
Subjt:  ISIILRVKTYANMKCTRKMFSI-IMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSE-QSDFCVVIALEFHTYG

Query:  ETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNN
         T    ++PT   E + + G IDY  FVS D+  F+ +V  L +++   + +TNSQIK  V    + LTT R ECIIGG A G+E ++++   P +FF N
Subjt:  ETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNN

Query:  FKSERVWFFKSND-HDIMLTAPMGLHTRISSYFPQ
        F SER+W FKS D   + L APMGL+  ISSYFP+
Subjt:  FKSERVWFFKSND-HDIMLTAPMGLHTRISSYFPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCACGTTCAACATTCCCATGAAAGCTCTTGATGATGGAATCTCCATTATCCTTAGAGTTAAAACTTATGCCAATATGAAATGCACAAGAAAAATGTTCTCCATAAT
AATGCCTCCAACACCCGATCGTTGCTTCACAGCTGCCTTTCAAATGGCCCCTCAATTCTTCACTCTATTTACTTGCAATTATCTTCACTATGCCATCTTTTCCCTCCCCA
ACTTATACACTCTCATGTTGGATATGCAACGCCTTGGCTTCTCTTCACTAACCCTTTCTCTTTCCGAACAGTCCGATTTTTGTGTCGTCATCGCCCTTGAATTTCATACT
TATGGAGAAACTTTCAGTTTGGCAATGTTGCCTACTTTCGAGTCCGAGGATGAGGAGGATGTAGGGGAAATTGATTATACTTACTTTGTCTCAATTGATATAGAGGATTT
CAAAGGGATTGTGGAAGAGTTAGGCGATGATGATGAAGTTAGTGTTGTTCTAACGAATTCACAAATCAAGTTCTCTGTTGGATGGAGACTCATTACTCTTACTACAATGA
GAAAAGAATGCATAATTGGAGGCATTGCAGTAGGCGAAGAAATTCAAACCTCAATCAATTTCGATCCCATTGATTTTTTCAATAATTTCAAATCCGAAAGAGTATGGTTC
TTCAAGTCGAATGATCATGATATAATGCTCACGGCTCCTATGGGATTGCATACTCGAATTTCGTCCTATTTTCCTCAGAGACTT
mRNA sequenceShow/hide mRNA sequence
AAACAAATAAAATCATGCTCACGTTCAACATTCCCATGAAAGCTCTTGATGATGGAATCTCCATTATCCTTAGAGTTAAAACTTATGCCAATATGAAATGCACAAGAAAA
ATGTTCTCCATAATAATGCCTCCAACACCCGATCGTTGCTTCACAGCTGCCTTTCAAATGGCCCCTCAATTCTTCACTCTATTTACTTGCAATTATCTTCACTATGCCAT
CTTTTCCCTCCCCAACTTATACACTCTCATGTTGGATATGCAACGCCTTGGCTTCTCTTCACTAACCCTTTCTCTTTCCGAACAGTCCGATTTTTGTGTCGTCATCGCCC
TTGAATTTCATACTTATGGAGAAACTTTCAGTTTGGCAATGTTGCCTACTTTCGAGTCCGAGGATGAGGAGGATGTAGGGGAAATTGATTATACTTACTTTGTCTCAATT
GATATAGAGGATTTCAAAGGGATTGTGGAAGAGTTAGGCGATGATGATGAAGTTAGTGTTGTTCTAACGAATTCACAAATCAAGTTCTCTGTTGGATGGAGACTCATTAC
TCTTACTACAATGAGAAAAGAATGCATAATTGGAGGCATTGCAGTAGGCGAAGAAATTCAAACCTCAATCAATTTCGATCCCATTGATTTTTTCAATAATTTCAAATCCG
AAAGAGTATGGTTCTTCAAGTCGAATGATCATGATATAATGCTCACGGCTCCTATGGGATTGCATACTCGAATTTCGTCCTATTTTCCTCAGAGACTT
Protein sequenceShow/hide protein sequence
MLTFNIPMKALDDGISIILRVKTYANMKCTRKMFSIIMPPTPDRCFTAAFQMAPQFFTLFTCNYLHYAIFSLPNLYTLMLDMQRLGFSSLTLSLSEQSDFCVVIALEFHT
YGETFSLAMLPTFESEDEEDVGEIDYTYFVSIDIEDFKGIVEELGDDDEVSVVLTNSQIKFSVGWRLITLTTMRKECIIGGIAVGEEIQTSINFDPIDFFNNFKSERVWF
FKSNDHDIMLTAPMGLHTRISSYFPQRL