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Lsi09G016480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNAC domain-containing protein 43
Genome locationchr09:24797649..24797972
RNA-Seq ExpressionLsi09G016480
SyntenyLsi09G016480
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575247.1 NAC domain-containing protein 43, partial [Cucurbita argyrosperma subsp. sororia]3.6e-3882.46Show/hide
Query:  MMISGYQLESSS-LSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPT-PTLRGTTSFSSKSSSSSYNAAAIAASQDYNNVDTELWSFARL-----
        ++ISGYQLESSS  +AATAPHNWAAFDRLVASQLNGQIEVSNMIYY+DQLPT PTLRGTTSFSSKSSSSSY A   AA QDYNNVDTELWSFA+L     
Subjt:  MMISGYQLESSS-LSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPT-PTLRGTTSFSSKSSSSSYNAAAIAASQDYNNVDTELWSFARL-----

Query:  SSTDPLCHVSDTPI
        SS+DPLCHVS+TPI
Subjt:  SSTDPLCHVSDTPI

XP_008459751.1 PREDICTED: NAC domain-containing protein 43 [Cucumis melo]6.5e-4084.68Show/hide
Query:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLP-TPTLRGTTSFSSKSSSSSYN---AAAIAASQDYNNVDTELWSFARLSST
        M++SGYQL+SSS+S  +APHNWAAFDRLVASQLNGQ+EVSNMIYYSDQLP T TLRGTTSFSSKSSSSSYN   AAA  A+QDYNNVDTELWSFARLSST
Subjt:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLP-TPTLRGTTSFSSKSSSSSYN---AAAIAASQDYNNVDTELWSFARLSST

Query:  DPLCHVSDTPI
        DPLCHVSDT I
Subjt:  DPLCHVSDTPI

XP_011656855.1 NAC domain-containing protein 43 [Cucumis sativus]1.2e-3883.64Show/hide
Query:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLP-TPTLRGTTSFSSKSSSSSYNA--AAIAASQDYNNVDTELWSFARLSSTD
        M++SGYQL+SSS+  ++APHNWAAFDRLVASQLNGQ+EVSNMIYYSDQLP T TLR TTSFSSKSSSSSYNA  AA  A QDYNNVDTELWSFARLSSTD
Subjt:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLP-TPTLRGTTSFSSKSSSSSYNA--AAIAASQDYNNVDTELWSFARLSSTD

Query:  PLCHVSDTPI
        PLCHVSDT I
Subjt:  PLCHVSDTPI

XP_022958830.1 NAC domain-containing protein 43 [Cucurbita moschata]1.4e-3983.19Show/hide
Query:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPT-PTLRGTTSFSSKSSSSSYNAAAIAASQDYNNVDTELWSFARL-----S
        ++ISGYQLESSS +AATAPHNWAAFDRLVASQLNGQIEVSNMIYY+DQLPT PTLRGTTSFSSKSSSSSY A   AA QDYNNVDTELWSFA+L     S
Subjt:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPT-PTLRGTTSFSSKSSSSSYNAAAIAASQDYNNVDTELWSFARL-----S

Query:  STDPLCHVSDTPI
        S+DPLCHVS+TPI
Subjt:  STDPLCHVSDTPI

XP_038875770.1 NAC domain-containing protein 43 [Benincasa hispida]1.3e-4088.68Show/hide
Query:  SGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPTPTLRGTTSFSSKSSSSSYNA--AAIAASQDYNNVDTELWSFARLSSTDPLCH
        SGYQLE SS SA  APHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPTPTLRGT SFSSKSSSSSYNA  AA A +QDYNNVDTELWSFARLSS+DPLCH
Subjt:  SGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPTPTLRGTTSFSSKSSSSSYNA--AAIAASQDYNNVDTELWSFARLSSTDPLCH

Query:  VSDTPI
        VS+TPI
Subjt:  VSDTPI

TrEMBL top hitse value%identityAlignment
A0A0A0KDU5 NAC domain-containing protein5.9e-3983.64Show/hide
Query:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLP-TPTLRGTTSFSSKSSSSSYNA--AAIAASQDYNNVDTELWSFARLSSTD
        M++SGYQL+SSS+  ++APHNWAAFDRLVASQLNGQ+EVSNMIYYSDQLP T TLR TTSFSSKSSSSSYNA  AA  A QDYNNVDTELWSFARLSSTD
Subjt:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLP-TPTLRGTTSFSSKSSSSSYNA--AAIAASQDYNNVDTELWSFARLSSTD

Query:  PLCHVSDTPI
        PLCHVSDT I
Subjt:  PLCHVSDTPI

A0A1S3CC46 NAC domain-containing protein 433.1e-4084.68Show/hide
Query:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLP-TPTLRGTTSFSSKSSSSSYN---AAAIAASQDYNNVDTELWSFARLSST
        M++SGYQL+SSS+S  +APHNWAAFDRLVASQLNGQ+EVSNMIYYSDQLP T TLRGTTSFSSKSSSSSYN   AAA  A+QDYNNVDTELWSFARLSST
Subjt:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLP-TPTLRGTTSFSSKSSSSSYN---AAAIAASQDYNNVDTELWSFARLSST

Query:  DPLCHVSDTPI
        DPLCHVSDT I
Subjt:  DPLCHVSDTPI

A0A5D3DM70 NAC domain-containing protein 433.1e-4084.68Show/hide
Query:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLP-TPTLRGTTSFSSKSSSSSYN---AAAIAASQDYNNVDTELWSFARLSST
        M++SGYQL+SSS+S  +APHNWAAFDRLVASQLNGQ+EVSNMIYYSDQLP T TLRGTTSFSSKSSSSSYN   AAA  A+QDYNNVDTELWSFARLSST
Subjt:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLP-TPTLRGTTSFSSKSSSSSYN---AAAIAASQDYNNVDTELWSFARLSST

Query:  DPLCHVSDTPI
        DPLCHVSDT I
Subjt:  DPLCHVSDTPI

A0A6J1H4K5 NAC domain-containing protein 437.0e-4083.19Show/hide
Query:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPT-PTLRGTTSFSSKSSSSSYNAAAIAASQDYNNVDTELWSFARL-----S
        ++ISGYQLESSS +AATAPHNWAAFDRLVASQLNGQIEVSNMIYY+DQLPT PTLRGTTSFSSKSSSSSY A   AA QDYNNVDTELWSFA+L     S
Subjt:  MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPT-PTLRGTTSFSSKSSSSSYNAAAIAASQDYNNVDTELWSFARL-----S

Query:  STDPLCHVSDTPI
        S+DPLCHVS+TPI
Subjt:  STDPLCHVSDTPI

A0A6J1KW93 NAC domain-containing protein 438.6e-3881.58Show/hide
Query:  MMISGYQLESSS-LSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPT-PTLRGTTSFSSKSSSSSYNAAAIAASQDYNNVDTELWSFARL-----
        ++I GYQLESSS  +AA+APHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPT PTLRGTTSFSSKSSSSSY A   AA QDYNNVDTELWSFA+L     
Subjt:  MMISGYQLESSS-LSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPT-PTLRGTTSFSSKSSSSSYNAAAIAASQDYNNVDTELWSFARL-----

Query:  SSTDPLCHVSDTPI
        SS+DPLCHVS+TPI
Subjt:  SSTDPLCHVSDTPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46770.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein2.7e-0438.04Show/hide
Query:  NWAAFDRLVASQLNGQIE-----VSNMIYYSDQLPTPTLRGTTSFSSKSSSSSYNAAAIAASQDYNNVDTELW---SFARLSSTDPLCHVSD
        +WAA DRLVASQLNG        V+      D L  P++R  + + S + S+SY+A     +Q+Y   + ELW   + +  SS  P CHVS+
Subjt:  NWAAFDRLVASQLNGQIE-----VSNMIYYSDQLPTPTLRGTTSFSSKSSSSSYNAAAIAASQDYNNVDTELW---SFARLSSTDPLCHVSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATTTCTGGCTACCAATTGGAGTCCTCTTCCCTCTCTGCCGCCACGGCTCCTCACAACTGGGCGGCGTTCGACCGACTAGTGGCGTCGCAGCTCAATGGCCAAAT
CGAAGTATCCAACATGATTTATTACAGTGATCAATTGCCAACTCCAACACTACGCGGAACGACATCGTTTTCATCTAAATCTTCATCTTCTTCTTACAACGCCGCCGCCA
TAGCCGCCTCTCAAGATTACAACAACGTCGACACAGAGCTATGGAGCTTTGCCAGGTTGTCGTCTACTGACCCATTATGCCACGTGTCCGACACTCCCATATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATTTCTGGCTACCAATTGGAGTCCTCTTCCCTCTCTGCCGCCACGGCTCCTCACAACTGGGCGGCGTTCGACCGACTAGTGGCGTCGCAGCTCAATGGCCAAAT
CGAAGTATCCAACATGATTTATTACAGTGATCAATTGCCAACTCCAACACTACGCGGAACGACATCGTTTTCATCTAAATCTTCATCTTCTTCTTACAACGCCGCCGCCA
TAGCCGCCTCTCAAGATTACAACAACGTCGACACAGAGCTATGGAGCTTTGCCAGGTTGTCGTCTACTGACCCATTATGCCACGTGTCCGACACTCCCATATAA
Protein sequenceShow/hide protein sequence
MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPTPTLRGTTSFSSKSSSSSYNAAAIAASQDYNNVDTELWSFARLSSTDPLCHVSDTPI