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Lsi09G016520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiontranscription factor MYC2-like
Genome locationchr09:24836833..24837452
RNA-Seq ExpressionLsi09G016520
SyntenyLsi09G016520
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140617.1 transcription factor MYC2 [Cucumis sativus]9.5e-0567.39Show/hide
Query:  RFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
        R   + I HASITNVN   MLQDVLIKLPHGFSTDE LK   LS++
Subjt:  RFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
XP_016902487.1 PREDICTED: transcription factor MYC2-like [Cucumis melo]9.5e-0567.39Show/hide
Query:  RFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
        R   + I HASITNVN   MLQDVLIKLPHGFSTDE LK   LS++
Subjt:  RFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
XP_023006584.1 transcription factor MYC2-like [Cucurbita maxima]7.3e-0575Show/hide
Query:  IHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
        IHHA+ITNVN   MLQDVLIKLPHGFSTDE  K   LSK+
Subjt:  IHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
XP_038875083.1 transcription factor MYC1-like [Benincasa hispida]1.9e-0567.39Show/hide
Query:  RFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
        R   + IHHASITNVN  FMLQDVLI+LPHGFST+E LK   LS++
Subjt:  RFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
TrEMBL top hitse value%identityAlignment
A0A0A0KFN7 BHLH domain-containing protein4.6e-0567.39Show/hide
Query:  RFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
        R   + I HASITNVN   MLQDVLIKLPHGFSTDE LK   LS++
Subjt:  RFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
A0A1S4E2N5 transcription factor MYC2-like4.6e-0567.39Show/hide
Query:  RFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
        R   + I HASITNVN   MLQDVLIKLPHGFSTDE LK   LS++
Subjt:  RFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
A0A5A7TCG3 Transcription factor MYC2-like4.6e-0567.39Show/hide
Query:  RFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
        R   + I HASITNVN   MLQDVLIKLPHGFSTDE LK   LS++
Subjt:  RFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
A0A6J1L2K7 transcription factor MYC2-like3.5e-0575Show/hide
Query:  IHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
        IHHA+ITNVN   MLQDVLIKLPHGFSTDE  K   LSK+
Subjt:  IHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTCCAATAGCCTTGTGGCACAAATAGGGAAAAAAAACAGGGTAGAAACGAGGTCGAAAGTCAAATATGAGCAAAGAGAATACAATAAATCATGTGGAAGCAG
AACGATAGAGAAGGGAAAAACTAAACAACTGATTCTACGCATTACGATCAGTAGTCCCAAATGTGTCGAGAATGGACAAAGCGTCGTCGCTATCCGATACGGTTTCGTAC
ATAAATGCACTAAAGGCGAAAGTGGAGGAGATAAAGAAGAAATTAAGAGAGGAAAAGGAAGAAGAAAGCGTGGACAACTAGAGCACCACCACCTCGGAGGAGCAAATGAA
GGGGAACGCCACAACCACCACACGGTTCGAGGTGGAGGTCAAAATCATCGGAGGCAACGCAATGGTTCGAGTTCAATATTAGAATCTAAACTTCCCTTCTGTCATACTAA
TGAAAGATTTTTTAGATATGGAATTCACCATGCTAGTATAACAAATGTTAATTTTTTTTTTATGCTTCAAGATGTTTTGATTAAGCTTCCTCATGGTTTCTCCACTGATG
AAACTTTGAAAGTTGTTGATTTGTCAAAAATAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTCCAATAGCCTTGTGGCACAAATAGGGAAAAAAAACAGGGTAGAAACGAGGTCGAAAGTCAAATATGAGCAAAGAGAATACAATAAATCATGTGGAAGCAG
AACGATAGAGAAGGGAAAAACTAAACAACTGATTCTACGCATTACGATCAGTAGTCCCAAATGTGTCGAGAATGGACAAAGCGTCGTCGCTATCCGATACGGTTTCGTAC
ATAAATGCACTAAAGGCGAAAGTGGAGGAGATAAAGAAGAAATTAAGAGAGGAAAAGGAAGAAGAAAGCGTGGACAACTAGAGCACCACCACCTCGGAGGAGCAAATGAA
GGGGAACGCCACAACCACCACACGGTTCGAGGTGGAGGTCAAAATCATCGGAGGCAACGCAATGGTTCGAGTTCAATATTAGAATCTAAACTTCCCTTCTGTCATACTAA
TGAAAGATTTTTTAGATATGGAATTCACCATGCTAGTATAACAAATGTTAATTTTTTTTTTATGCTTCAAGATGTTTTGATTAAGCTTCCTCATGGTTTCTCCACTGATG
AAACTTTGAAAGTTGTTGATTTGTCAAAAATAGACTAA
Protein sequenceShow/hide protein sequence
MGNSNSLVAQIGKKNRVETRSKVKYEQREYNKSCGSRTIEKGKTKQLILRITISSPKCVENGQSVVAIRYGFVHKCTKGESGGDKEEIKRGKGRRKRGQLEHHHLGGANE
GERHNHHTVRGGGQNHRRQRNGSSSILESKLPFCHTNERFFRYGIHHASITNVNFFFMLQDVLIKLPHGFSTDETLKVVDLSKID