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Lsi09G016560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncytochrome b5
Genome locationchr09:24931374..24933285
RNA-Seq ExpressionLsi09G016560
SyntenyLsi09G016560
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001199 - Cytochrome b5-like heme/steroid binding domain
IPR018506 - Cytochrome b5, heme-binding site
IPR036400 - Cytochrome b5-like heme/steroid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140502.1 cytochrome b5 [Cucumis sativus]5.5e-5180.92Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT
        MDSNS+VYSFDEVAKHN +KDCWLIISGYVYDVTSFLPDHPGGDELLLLA          SVGHSE A EKMK Y+IGKIDMSTLP KQ YVE+ PYQ T
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT

Query:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA
        PSLFSFSPIH+++PILLLALAFAFPYFKLKA
Subjt:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA

XP_008459741.1 PREDICTED: cytochrome b5 [Cucumis melo]4.8e-5585.5Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT
        MDSNS+VYSFDEVAKHNH+KDCWLIISGYVYDVTSFLPDHPGGDELLLLA          SVGHSE AQEKMK YRIGKIDMSTLP+KQ YVE+TPYQPT
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT

Query:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA
        PSLFSFSPIHV++PILLLALAFAFPYFKLKA
Subjt:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA

XP_022964486.1 cytochrome b5-like [Cucurbita moschata]4.8e-4773.28Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT
        MDSNS+VY+FDEVAKHNH KDCWLIISG+VYDVTS+LPDHPGG ELL+LA          SVGHSESA+E+MKKY+IGKID  TLP +Q +VETTP++PT
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT

Query:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA
        PSL SFSP+HV+IP+LLL LAFAFPY K+KA
Subjt:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA

XP_023000205.1 cytochrome b5-like [Cucurbita maxima]6.3e-4772.52Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT
        MDSNS++Y+F+EVAKHNH KDCWLIISGYVYDVTS+LPDHPGG ELL+L           SVGHSE+A+E MKKY+IGKID  TLP +Q YVETTPY+PT
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT

Query:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA
        PSL SFSP+HV+IP+LLL LAFAFPY K+KA
Subjt:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA

XP_038875836.1 cytochrome b5-like [Benincasa hispida]1.1e-5482.71Show/hide
Query:  MEMDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQ
        M+MDS+S++YSFDEV+KHNH +DCWLIISGYVYDVT+FLPDHPGG+ELLLLA          SVGHSE AQEKMKKYRIGKIDMSTLPRKQ YVETTPYQ
Subjt:  MEMDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQ

Query:  PTPSLFSFSPIHVIIPILLLALAFAFPYFKLKA
        PTPSLFSFSPIH++IPILLLALAFAFPYFKLKA
Subjt:  PTPSLFSFSPIHVIIPILLLALAFAFPYFKLKA

TrEMBL top hitse value%identityAlignment
A0A0A0KA20 Cytochrome b5 heme-binding domain-containing protein2.7e-5180.92Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT
        MDSNS+VYSFDEVAKHN +KDCWLIISGYVYDVTSFLPDHPGGDELLLLA          SVGHSE A EKMK Y+IGKIDMSTLP KQ YVE+ PYQ T
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT

Query:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA
        PSLFSFSPIH+++PILLLALAFAFPYFKLKA
Subjt:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA

A0A1S3CAE5 cytochrome b52.3e-5585.5Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT
        MDSNS+VYSFDEVAKHNH+KDCWLIISGYVYDVTSFLPDHPGGDELLLLA          SVGHSE AQEKMK YRIGKIDMSTLP+KQ YVE+TPYQPT
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT

Query:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA
        PSLFSFSPIHV++PILLLALAFAFPYFKLKA
Subjt:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA

A0A6J1HJ10 cytochrome b5-like2.3e-4773.28Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT
        MDSNS+VY+FDEVAKHNH KDCWLIISG+VYDVTS+LPDHPGG ELL+LA          SVGHSESA+E+MKKY+IGKID  TLP +Q +VETTP++PT
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT

Query:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA
        PSL SFSP+HV+IP+LLL LAFAFPY K+KA
Subjt:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA

A0A6J1KHQ2 cytochrome b5-like3.1e-4772.52Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT
        MDSNS++Y+F+EVAKHNH KDCWLIISGYVYDVTS+LPDHPGG ELL+L           SVGHSE+A+E MKKY+IGKID  TLP +Q YVETTPY+PT
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPT

Query:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA
        PSL SFSP+HV+IP+LLL LAFAFPY K+KA
Subjt:  PSLFSFSPIHVIIPILLLALAFAFPYFKLKA

M5X125 Cytochrome b5 heme-binding domain-containing protein1.9e-2851.88Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAY---VETTPY
        M S+S+VY FDEVAKHNH+KDCW+IISG VYDVT FL DHPGGDE+LLLA           VGHS+SA+E+M+K+ +GK+D ST+P + +Y    +TTP 
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLA----------SVGHSESAQEKMKKYRIGKIDMSTLPRKQAY---VETTPY

Query:  QPTPSLFSFSPIHVIIPILLLALAFAFPYFKLK
            S F    +  ++P+L+L  AFA  Y+  K
Subjt:  QPTPSLFSFSPIHVIIPILLLALAFAFPYFKLK

SwissProt top hitse value%identityAlignment
O48845 Cytochrome b5 isoform B1.8e-2040.48Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP-
        M   +++++  EV++HN   DCW++I+G VY+VT FL DHPGGD++LL ++          VGHSESA+E M++Y +G+ID +T+P+K  Y  T P QP 
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP-

Query:  ----TPSLFSFSPIHVIIPILLLALA
              S F    +  ++P+ +L LA
Subjt:  ----TPSLFSFSPIHVIIPILLLALA

P40934 Cytochrome b53.9e-2345.59Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP-
        M S  +V  F+EV++HN  KDCWLIISG VYDVT F+ DHPGGDE+LL ++          VGHS++A++ M+KY IG+ID ST+P  + YV   P QP 
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP-

Query:  -----TPSLFSFSPIHVIIPILLLALAFAFPYFKLK
             TP  F    +  ++PIL+L LA     +  K
Subjt:  -----TPSLFSFSPIHVIIPILLLALAFAFPYFKLK

P49098 Cytochrome b52.1e-2141.67Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP-
        M   ++V++  EV++HN+ KDCWL+ISG VYDVT FL DHPGGDE+LL A+          VGHS SA+  + +Y +G ID +T+P K  Y  T P QP 
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP-

Query:  ----TPSLFSFSPIHVIIPILLLALAFAFPYF
              S F    +  ++P+++L +AF   ++
Subjt:  ----TPSLFSFSPIHVIIPILLLALAFAFPYF

P49100 Cytochrome b54.0e-2042.97Show/hide
Query:  DSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP--
        + N +VY+ +EVAKHN + DCWLII G VY+V+ FL DHPGGD++LL ++          VGHS +A+  M +Y +G ID ST+P +  YV   P QP  
Subjt:  DSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP--

Query:  ----TPSLFSFSPIHVIIPILLLALAFA
            TP  F    +  ++P+ +L LA A
Subjt:  ----TPSLFSFSPIHVIIPILLLALAFA

Q42342 Cytochrome b5 isoform E1.0e-2346.32Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP-
        M S+ +V SF+EV+KHN  KDCWLIISG VYDVT F+ DHPGGDE+LL ++          VGHS++A++ M KY IG+ID S++P  + YV   P QP 
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP-

Query:  -----TPSLFSFSPIHVIIPILLLALAFAFPYFKLK
             TP  F    +  ++PIL+L LA    ++  K
Subjt:  -----TPSLFSFSPIHVIIPILLLALAFAFPYFKLK

Arabidopsis top hitse value%identityAlignment
AT1G26340.1 cytochrome B5 isoform A5.9e-1934.92Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTL---PRKQAYVETTPY
        M + +++YS +E A HN + DCW++I G VYDV+S++ +HPGGD++LL  +           GHS+ A+E M+KY IG++D S+L   P  + Y +  P 
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTL---PRKQAYVETTPY

Query:  QPTPSLFSFSPIHVIIPILLLALAFA
             LF  +  + ++P+ ++ ++ A
Subjt:  QPTPSLFSFSPIHVIIPILLLALAFA

AT2G32720.1 cytochrome B5 isoform B1.3e-2140.48Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP-
        M   +++++  EV++HN   DCW++I+G VY+VT FL DHPGGD++LL ++          VGHSESA+E M++Y +G+ID +T+P+K  Y  T P QP 
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP-

Query:  ----TPSLFSFSPIHVIIPILLLALA
              S F    +  ++P+ +L LA
Subjt:  ----TPSLFSFSPIHVIIPILLLALA

AT2G46650.1 cytochrome B5 isoform C5.4e-2038.17Show/hide
Query:  SEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYV-----ETTPYQP
        + + SF +VAKH  + DCW++I G VYD+++F+ +HPGGD +LL  +          V HS+ A+E MKKY IG +D ST+P  Q Y+     E+T  + 
Subjt:  SEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYV-----ETTPYQP

Query:  TPSLFSFSPIHVIIPILLLALAFAFPYFKLK
        T        +  +IP+L+L +AFA  ++  K
Subjt:  TPSLFSFSPIHVIIPILLLALAFAFPYFKLK

AT5G48810.1 cytochrome B5 isoform D6.3e-2138.69Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETT-----
        M  + +V++  EV++H+  KDCW++I G VYDVT FL DHPGGDE++L ++          VGHS +A+  + +Y +G ID +T+P K  +V  T     
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETT-----

Query:  PYQPTPSLFSFSPIHVIIPILLLALAFAFPYF-KLKA
          Q   S F    +  ++P+L+L LAF   Y+ K KA
Subjt:  PYQPTPSLFSFSPIHVIIPILLLALAFAFPYF-KLKA

AT5G53560.1 cytochrome B5 isoform E7.2e-2546.32Show/hide
Query:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP-
        M S+ +V SF+EV+KHN  KDCWLIISG VYDVT F+ DHPGGDE+LL ++          VGHS++A++ M KY IG+ID S++P  + YV   P QP 
Subjt:  MDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLAS----------VGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQP-

Query:  -----TPSLFSFSPIHVIIPILLLALAFAFPYFKLK
             TP  F    +  ++PIL+L LA    ++  K
Subjt:  -----TPSLFSFSPIHVIIPILLLALAFAFPYFKLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGGATTCAAATTCTGAAGTGTATTCTTTTGATGAAGTTGCAAAGCACAACCACCGGAAAGATTGCTGGCTTATAATCTCTGGATATGTGTACGATGTGACTTC
ATTTTTGCCGGACCATCCAGGTGGCGATGAGCTTCTGCTACTTGCAAGTGTTGGACATAGCGAGTCAGCTCAAGAGAAGATGAAAAAGTATCGAATAGGAAAGATCGACA
TGTCAACTCTCCCTAGGAAACAGGCATATGTGGAAACTACACCATATCAGCCAACTCCAAGTCTATTTTCCTTCTCACCCATCCATGTTATAATCCCTATTTTGCTCTTG
GCCTTGGCTTTTGCATTTCCCTACTTCAAACTTAAAGCA
mRNA sequenceShow/hide mRNA sequence
AAATAAATACACCCACAAAGGGAACATTTTTTTGAAAGAGCAATCATTGAGAAGAAACAAGCAGGTGAAGAGAAAAGTTGATGGAAATGGATTCAAATTCTGAAGTGTAT
TCTTTTGATGAAGTTGCAAAGCACAACCACCGGAAAGATTGCTGGCTTATAATCTCTGGATATGTGTACGATGTGACTTCATTTTTGCCGGACCATCCAGGTGGCGATGA
GCTTCTGCTACTTGCAAGTGTTGGACATAGCGAGTCAGCTCAAGAGAAGATGAAAAAGTATCGAATAGGAAAGATCGACATGTCAACTCTCCCTAGGAAACAGGCATATG
TGGAAACTACACCATATCAGCCAACTCCAAGTCTATTTTCCTTCTCACCCATCCATGTTATAATCCCTATTTTGCTCTTGGCCTTGGCTTTTGCATTTCCCTACTTCAAA
CTTAAAGCA
Protein sequenceShow/hide protein sequence
MEMDSNSEVYSFDEVAKHNHRKDCWLIISGYVYDVTSFLPDHPGGDELLLLASVGHSESAQEKMKKYRIGKIDMSTLPRKQAYVETTPYQPTPSLFSFSPIHVIIPILLL
ALAFAFPYFKLKA