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Lsi09G016590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEF-hand domain-containing protein
Genome locationchr09:25011834..25012262
RNA-Seq ExpressionLsi09G016590
SyntenyLsi09G016590
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039753.1 EF_hand_5 domain-containing protein [Cucumis melo var. makuwa]3.2e-4284.5Show/hide
Query:  MSNRDLTDSER-EETPNSSSTDSK-KPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKD
        MSNRDLTDSE  EETPNSS+TDSK K R SMN R+ KDVPEYEKQR+SRI ENKKRMEALGL KLATSFLDSSKNLRK DRKGKRKLGEAADEDY+PG+D
Subjt:  MSNRDLTDSER-EETPNSSSTDSK-KPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKD

Query:  SSSSED-DDSEEGDEDFGSGKVSGSRGMK
        SSSSED DDSEE DE+FGSGK SGSRG K
Subjt:  SSSSED-DDSEEGDEDFGSGKVSGSRGMK

XP_004140495.1 uncharacterized protein LOC101206207 [Cucumis sativus]1.4e-4588.37Show/hide
Query:  MSNRDLTDSER-EETPNSSSTDSKKP-RGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKD
        MSNRDLTDSE  EETPNSS+T SKK  RGSMNGRN KDVPEYEKQR+SRIAENKKRMEALGLAK+ATSFLDSSKNLRK D KGKRKLGEAAD+DYKPG D
Subjt:  MSNRDLTDSER-EETPNSSSTDSKKP-RGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKD

Query:  SSSSED-DDSEEGDEDFGSGKVSGSRGMK
        SSSSED DDSEEGDEDFGSGKVSGSRG K
Subjt:  SSSSED-DDSEEGDEDFGSGKVSGSRGMK

XP_016902477.1 PREDICTED: uncharacterized protein LOC103499070 [Cucumis melo]3.2e-4284.5Show/hide
Query:  MSNRDLTDSER-EETPNSSSTDSK-KPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKD
        MSNRDLTDSE  EETPNSS+TDSK K R SMN R+ KDVPEYEKQR+SRI ENKKRMEALGL KLATSFLDSSKNLRK DRKGKRKLGEAADEDY+PG+D
Subjt:  MSNRDLTDSER-EETPNSSSTDSK-KPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKD

Query:  SSSSED-DDSEEGDEDFGSGKVSGSRGMK
        SSSSED DDSEE DE+FGSGK SGSRG K
Subjt:  SSSSED-DDSEEGDEDFGSGKVSGSRGMK

XP_023547370.1 uncharacterized protein LOC111806339 isoform X1 [Cucurbita pepo subsp. pepo]1.4e-3778.69Show/hide
Query:  LTDSEREETPNSSSTDSKK-PRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKDSSSSED
        ++DSER+E PNSSSTD+KK PRGS++G + KD PEYEKQRLSRIAEN+KRMEALGLAKLATSF+DSSK LRKIDRKGKRK     DEDY P +DSS+SED
Subjt:  LTDSEREETPNSSSTDSKK-PRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKDSSSSED

Query:  DDSEEGDEDFGSGKVSGSRGMK
        DDSEEGDE FGSGKVS SRGMK
Subjt:  DDSEEGDEDFGSGKVSGSRGMK

XP_023547371.1 caltractin-like isoform X2 [Cucurbita pepo subsp. pepo]1.4e-3778.69Show/hide
Query:  LTDSEREETPNSSSTDSKK-PRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKDSSSSED
        ++DSER+E PNSSSTD+KK PRGS++G + KD PEYEKQRLSRIAEN+KRMEALGLAKLATSF+DSSK LRKIDRKGKRK     DEDY P +DSS+SED
Subjt:  LTDSEREETPNSSSTDSKK-PRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKDSSSSED

Query:  DDSEEGDEDFGSGKVSGSRGMK
        DDSEEGDE FGSGKVS SRGMK
Subjt:  DDSEEGDEDFGSGKVSGSRGMK

TrEMBL top hitse value%identityAlignment
A0A0A0KDV1 EF-hand domain-containing protein6.7e-4688.37Show/hide
Query:  MSNRDLTDSER-EETPNSSSTDSKKP-RGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKD
        MSNRDLTDSE  EETPNSS+T SKK  RGSMNGRN KDVPEYEKQR+SRIAENKKRMEALGLAK+ATSFLDSSKNLRK D KGKRKLGEAAD+DYKPG D
Subjt:  MSNRDLTDSER-EETPNSSSTDSKKP-RGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKD

Query:  SSSSED-DDSEEGDEDFGSGKVSGSRGMK
        SSSSED DDSEEGDEDFGSGKVSGSRG K
Subjt:  SSSSED-DDSEEGDEDFGSGKVSGSRGMK

A0A1S4E2M5 uncharacterized protein LOC1034990701.5e-4284.5Show/hide
Query:  MSNRDLTDSER-EETPNSSSTDSK-KPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKD
        MSNRDLTDSE  EETPNSS+TDSK K R SMN R+ KDVPEYEKQR+SRI ENKKRMEALGL KLATSFLDSSKNLRK DRKGKRKLGEAADEDY+PG+D
Subjt:  MSNRDLTDSER-EETPNSSSTDSK-KPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKD

Query:  SSSSED-DDSEEGDEDFGSGKVSGSRGMK
        SSSSED DDSEE DE+FGSGK SGSRG K
Subjt:  SSSSED-DDSEEGDEDFGSGKVSGSRGMK

A0A5D3DMC4 EF_hand_5 domain-containing protein1.5e-4284.5Show/hide
Query:  MSNRDLTDSER-EETPNSSSTDSK-KPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKD
        MSNRDLTDSE  EETPNSS+TDSK K R SMN R+ KDVPEYEKQR+SRI ENKKRMEALGL KLATSFLDSSKNLRK DRKGKRKLGEAADEDY+PG+D
Subjt:  MSNRDLTDSER-EETPNSSSTDSK-KPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKD

Query:  SSSSED-DDSEEGDEDFGSGKVSGSRGMK
        SSSSED DDSEE DE+FGSGK SGSRG K
Subjt:  SSSSED-DDSEEGDEDFGSGKVSGSRGMK

A0A6J1H502 caltractin-like isoform X28.7e-3878.69Show/hide
Query:  LTDSEREETPNSSSTDSKK-PRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKDSSSSED
        ++DSER+E PNSSSTD+KK PRGS++G + KD PEYEKQRLSRIAEN+KRMEALGLAKLATSF+DSSK LRKIDRKGKRK     DEDY PG+ SS+SED
Subjt:  LTDSEREETPNSSSTDSKK-PRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKDSSSSED

Query:  DDSEEGDEDFGSGKVSGSRGMK
        DDSEEGDE FGSGKVS SRGMK
Subjt:  DDSEEGDEDFGSGKVSGSRGMK

A0A6J1H6F0 uncharacterized protein LOC111460448 isoform X18.7e-3878.69Show/hide
Query:  LTDSEREETPNSSSTDSKK-PRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKDSSSSED
        ++DSER+E PNSSSTD+KK PRGS++G + KD PEYEKQRLSRIAEN+KRMEALGLAKLATSF+DSSK LRKIDRKGKRK     DEDY PG+ SS+SED
Subjt:  LTDSEREETPNSSSTDSKK-PRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKDSSSSED

Query:  DDSEEGDEDFGSGKVSGSRGMK
        DDSEEGDE FGSGKVS SRGMK
Subjt:  DDSEEGDEDFGSGKVSGSRGMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73440.1 calmodulin-related7.1e-0843.86Show/hide
Query:  SNRDLTDSEREETPNSSSTDSKKPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPG-KDSS
        S  + + SERE + +SS  +S+  +G+        + +YEKQRLSRIAENK R++ALG++K A + L  S   +K  R+ KR  GE  D+DY P   D  
Subjt:  SNRDLTDSEREETPNSSSTDSKKPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPG-KDSS

Query:  SSEDDDS-EEGDED
          EDDD  EE DED
Subjt:  SSEDDDS-EEGDED

AT4G00140.1 Calcium-binding EF-hand family protein1.3e-0443.48Show/hide
Query:  SNRDLTDSEREETPNSSSTDSKKPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDS
        S  + + SERE + +SS  +S+  +G         + EYEKQRLSRIAENK R++ALG+  +A S   S
Subjt:  SNRDLTDSEREETPNSSSTDSKKPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATCGCGACCTTACTGATTCCGAGCGCGAGGAAACTCCTAATTCTTCAAGCACCGACTCAAAGAAGCCCAGAGGTTCCATGAATGGCAGAAACGCCAAGGATGT
GCCGGAGTATGAGAAACAAAGGCTTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCACTTGGGCTGGCCAAATTGGCGACCTCATTTTTGGATTCCTCCAAGAATT
TGAGGAAGATTGATAGAAAGGGGAAGCGGAAGCTGGGTGAGGCTGCCGATGAAGATTATAAGCCTGGCAAGGATTCTTCAAGTTCTGAAGATGATGACTCGGAGGAAGGG
GATGAAGATTTTGGAAGTGGGAAAGTTTCTGGGTCTCGTGGAATGAAGGTAATCACTCTCCATTTTTGTTATATGTACTTTTTACCATTGTACAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATCGCGACCTTACTGATTCCGAGCGCGAGGAAACTCCTAATTCTTCAAGCACCGACTCAAAGAAGCCCAGAGGTTCCATGAATGGCAGAAACGCCAAGGATGT
GCCGGAGTATGAGAAACAAAGGCTTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCACTTGGGCTGGCCAAATTGGCGACCTCATTTTTGGATTCCTCCAAGAATT
TGAGGAAGATTGATAGAAAGGGGAAGCGGAAGCTGGGTGAGGCTGCCGATGAAGATTATAAGCCTGGCAAGGATTCTTCAAGTTCTGAAGATGATGACTCGGAGGAAGGG
GATGAAGATTTTGGAAGTGGGAAAGTTTCTGGGTCTCGTGGAATGAAGGTAATCACTCTCCATTTTTGTTATATGTACTTTTTACCATTGTACAAATAA
Protein sequenceShow/hide protein sequence
MSNRDLTDSEREETPNSSSTDSKKPRGSMNGRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSKNLRKIDRKGKRKLGEAADEDYKPGKDSSSSEDDDSEEG
DEDFGSGKVSGSRGMKVITLHFCYMYFLPLYK