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Lsi09G016720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016720
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin-responsive family protein
Genome locationchr09:25134752..25148133
RNA-Seq ExpressionLsi09G016720
SyntenyLsi09G016720
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34225.1 auxin-responsive family protein [Cucumis melo subsp. melo]5.7e-4493.68Show/hide
Query:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY
        +GERSQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHHHHHH  HLY
Subjt:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY

KAE8646784.1 hypothetical protein Csa_005698 [Cucumis sativus]3.7e-4393.48Show/hide
Query:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQY
        +GERSQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHH+HHH Y
Subjt:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQY

XP_008459757.1 PREDICTED: auxin-responsive protein SAUR32 [Cucumis melo]3.7e-4392.63Show/hide
Query:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY
        +GE SQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHHHHHH  HLY
Subjt:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY

XP_011656853.1 auxin-responsive protein SAUR32 [Cucumis sativus]3.7e-4393.48Show/hide
Query:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQY
        +GERSQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHH+HHH Y
Subjt:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQY

XP_038876020.1 auxin-responsive protein SAUR32 [Benincasa hispida]8.2e-4389.47Show/hide
Query:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY
        +GERSQG+FKDVPKGCLAIKVGHE+EEKQRF+VPV+Y NHPLFIQLLKEAE+EYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHH+H  HLY
Subjt:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY

TrEMBL top hitse value%identityAlignment
A0A0A0KFM7 Uncharacterized protein1.8e-4393.48Show/hide
Query:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQY
        +GERSQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHH+HHH Y
Subjt:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQY

A0A1S3CBD9 auxin-responsive protein SAUR321.8e-4392.63Show/hide
Query:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY
        +GE SQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHHHHHH  HLY
Subjt:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY

A0A5A7TA19 Auxin-responsive family protein2.7e-4493.68Show/hide
Query:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY
        +GERSQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHHHHHH  HLY
Subjt:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY

A0A803NUP8 Uncharacterized protein3.0e-3575.53Show/hide
Query:  GERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY
        G +++G  +DVPKGCLAI VG +NEE+QRFVVPV+YFNHPLF+QLLKEAE+EYGFDQKGTITIPCHVE+FRYVQ LID+E S+HHHH+H +HL+
Subjt:  GERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY

E5GCM6 Auxin-responsive family protein2.7e-4493.68Show/hide
Query:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY
        +GERSQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHHHHHH  HLY
Subjt:  TGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLY

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR368.3e-1451.39Show/hide
Query:  VPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETS
        VP+G LAI VG ++ +  R +VP++YFNHPLF +LL+EAE EYGF  +G ITIPC    F  V+  I   +S
Subjt:  VPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETS

P32295 Indole-3-acetic acid-induced protein ARG71.5e-1041.98Show/hide
Query:  RSQGSFK--DVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ-KGTITIPCHVEQFRYVQALIDQE
        R++ S K  D PKG LA+ VG   E  +RFV+PV + N PLF  LL +AE+E+G+D   G +TIPC  + F+++ + +  +
Subjt:  RSQGSFK--DVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ-KGTITIPCHVEQFRYVQALIDQE

P33082 Auxin-induced protein X151.1e-1041.98Show/hide
Query:  MTGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ-KGTITIPCHVEQFRYVQALID
        + G R   +  D PKG LA+ VG   E+ +RFV+PV Y N P F  LL +AE+E+G+D   G +TIPC  E F+ +   ++
Subjt:  MTGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ-KGTITIPCHVEQFRYVQALID

Q41220 Auxin-responsive protein SAUR151.3e-1147.76Show/hide
Query:  PKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ-KGTITIPCHVEQFRYVQALI
        P+G +A+ VG  +++K+R+VVPV Y N PLF QLL ++E+E+G+D   G +TIPCH   F  V + I
Subjt:  PKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ-KGTITIPCHVEQFRYVQALI

Q9ZUZ3 Auxin-responsive protein SAUR322.9e-3569.37Show/hide
Query:  TGERSQGSF----------KDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFH----H
        TGE++  SF          KDVPKGCLAIKVG + EE+QRF+VPVLYFNHPLF+QLLKEAEDEYGFDQKGTITIPCHVE+FRYVQALID E S +    H
Subjt:  TGERSQGSF----------KDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFH----H

Query:  HHHH----QYH
        HH H    QYH
Subjt:  HHHH----QYH

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family2.1e-3669.37Show/hide
Query:  TGERSQGSF----------KDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFH----H
        TGE++  SF          KDVPKGCLAIKVG + EE+QRF+VPVLYFNHPLF+QLLKEAEDEYGFDQKGTITIPCHVE+FRYVQALID E S +    H
Subjt:  TGERSQGSF----------KDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFH----H

Query:  HHHH----QYH
        HH H    QYH
Subjt:  HHHH----QYH

AT3G60690.1 SAUR-like auxin-responsive protein family4.8e-1750.68Show/hide
Query:  VPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSF
        VPKG  A+ +G ++ + QR +VP++YFNHPLF +LL+EAE+E+GF Q+G ITIPC    F+ VQ  I+  + F
Subjt:  VPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSF

AT3G61900.1 SAUR-like auxin-responsive protein family5.3e-3277.22Show/hide
Query:  SQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETS
        S+   KDVPKGCLAIKVG + EEKQRFVVPV YFNHPLF+QLL+EAE+EYGF+QKGTITIPCHVE FRYVQ +I++E S
Subjt:  SQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETS

AT4G00880.1 SAUR-like auxin-responsive protein family7.6e-3168.89Show/hide
Query:  VPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETS-------FHHHHHHQYHL
        VPKGCLA+KVG + EE++RFV+PV+YFNHPLF QLLKEAE+E+GF QKGTITIPCHVE+FRYVQ LID+E +         HHHHH  HL
Subjt:  VPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETS-------FHHHHHHQYHL

AT5G53590.1 SAUR-like auxin-responsive protein family9.0e-2454.74Show/hide
Query:  DVPKGCLAIKVGHENEEK--QRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHH---------HHHHQYHL
        DVPKGC+AI VGHE++E+   RFVVP+++ +HPLF+ LLKEAE EYGF   G ITIPC V++F++VQ +ID+ET   H         H+HH  HL
Subjt:  DVPKGCLAIKVGHENEEK--QRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHH---------HHHHQYHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGGGGAGAGAAGCCAAGGGAGTTTCAAGGATGTTCCAAAGGGTTGTTTGGCTATCAAAGTTGGGCATGAAAATGAAGAAAAACAAAGATTTGTAGTGCCTGTCTT
GTATTTCAATCATCCTTTGTTTATTCAGCTGCTTAAGGAAGCTGAAGATGAATATGGCTTTGATCAAAAGGGAACCATCACAATTCCTTGTCATGTGGAGCAATTTAGGT
ATGTTCAAGCCTTGATTGATCAAGAAACCTCATTTCATCATCACCATCACCACCAGTACCATCTCTATAGTAGAGCATTGAACGAACCCTCGCTAATTCTTCAACCGATA
TTACCCGGTTGCCTTCACTCTCGAAATGATCGAAGGCCGCACAGGCTATCTGCTCCCACCTGTCAAGAGCTTCCAATTGATGTGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGGGGAGAGAAGCCAAGGGAGTTTCAAGGATGTTCCAAAGGGTTGTTTGGCTATCAAAGTTGGGCATGAAAATGAAGAAAAACAAAGATTTGTAGTGCCTGTCTT
GTATTTCAATCATCCTTTGTTTATTCAGCTGCTTAAGGAAGCTGAAGATGAATATGGCTTTGATCAAAAGGGAACCATCACAATTCCTTGTCATGTGGAGCAATTTAGGT
ATGTTCAAGCCTTGATTGATCAAGAAACCTCATTTCATCATCACCATCACCACCAGTACCATCTCTATAGTAGAGCATTGAACGAACCCTCGCTAATTCTTCAACCGATA
TTACCCGGTTGCCTTCACTCTCGAAATGATCGAAGGCCGCACAGGCTATCTGCTCCCACCTGTCAAGAGCTTCCAATTGATGTGTACTGA
Protein sequenceShow/hide protein sequence
MTGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYSRALNEPSLILQPI
LPGCLHSRNDRRPHRLSAPTCQELPIDVY