; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G016740 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016740
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFiber protein fb11
Genome locationchr09:25174843..25180652
RNA-Seq ExpressionLsi09G016740
SyntenyLsi09G016740
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459762.1 PREDICTED: uncharacterized protein LOC103498799 [Cucumis melo]2.6e-10100Show/hide
Query:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
        GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
Subjt:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
XP_022150787.1 uncharacterized protein LOC111018851 [Momordica charantia]2.2e-0994.59Show/hide
Query:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
        GLFLPAFVRPILDSYEASKQVPQP LSDVVA MTGKK
Subjt:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
XP_022959928.1 uncharacterized protein LOC111460833 [Cucurbita moschata]4.9e-0994.59Show/hide
Query:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
        GLFLPA VRPILDS+EASKQVPQPVLSDVVASMTGKK
Subjt:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
XP_023006679.1 uncharacterized protein LOC111499335 [Cucurbita maxima]4.9e-0994.59Show/hide
Query:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
        GLFLPA VRPILDSYEASKQ PQPVLSDVVASMTGKK
Subjt:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
XP_038875998.1 uncharacterized protein LOC120068338 [Benincasa hispida]2.6e-10100Show/hide
Query:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
        GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
Subjt:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
TrEMBL top hitse value%identityAlignment
A0A1S3CAX6 uncharacterized protein LOC1034987991.3e-10100Show/hide
Query:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
        GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
Subjt:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
A0A6J1DBQ1 uncharacterized protein LOC1110188511.1e-0994.59Show/hide
Query:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
        GLFLPAFVRPILDSYEASKQVPQP LSDVVA MTGKK
Subjt:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
A0A6J1H9H3 uncharacterized protein LOC1114608332.4e-0994.59Show/hide
Query:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
        GLFLPA VRPILDS+EASKQVPQPVLSDVVASMTGKK
Subjt:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
A0A6J1L2U6 uncharacterized protein LOC1114993352.4e-0994.59Show/hide
Query:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
        GLFLPA VRPILDSYEASKQ PQPVLSDVVASMTGKK
Subjt:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
E5GCM8 Fiber protein fb111.3e-10100Show/hide
Query:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
        GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
Subjt:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46540.1 unknown protein6.9e-0975.68Show/hide
Query:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
        GLFLPA VRPILDS EASKQV  P L+DV+A +TGKK
Subjt:  GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCTTACCGGTTTATAAAAAGAATGTTGCGTACCACTCAACAGTGTGAGATGCTTCACCTAGCTTTAGCATCAAATGTGCAAGCACATGGTCTTTTCCTTCCAGC
CTTTGTAAGGCCAATTCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCCCGTATTAAGTGATGTGGTTGCAAGTATGACTGGAAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCTTACCGGTTTATAAAAAGAATGTTGCGTACCACTCAACAGTGTGAGATGCTTCACCTAGCTTTAGCATCAAATGTGCAAGCACATGGTCTTTTCCTTCCAGC
CTTTGTAAGGCCAATTCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCCCGTATTAAGTGATGTGGTTGCAAGTATGACTGGAAAGAAATAAGGATGATCTGTAT
CAGTGACAAAAGAAGATTGTTCTTAATCACTGGTTTTTTTTCTTAATCAATTTTCATTTTCATCTGCCTTAAATAAGCATGTACAACGTTTTTGGAAATCAAGCTTCATA
GCAATAGTTATTATGTTACATTGCCTTGTTTTATGCCCGTGTATAAGACTGATTTTCATGATATTTCAACTTTAATCAGTCCTTTCGAAGCCCGAGTAAAACTTGCTTCA
TCATAAATTGCAGTCTATAAACTCGTTTGATTTTTTAAGTTGGGATATAACGATCGACCTATTAACATAGTTTTTAGGATCAATTATCCCAAGCCA
Protein sequenceShow/hide protein sequence
MPPYRFIKRMLRTTQQCEMLHLALASNVQAHGLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK