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Lsi09G016750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF688 family protein
Genome locationchr09:25185057..25186420
RNA-Seq ExpressionLsi09G016750
SyntenyLsi09G016750
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34228.1 hypothetical protein [Cucumis melo subsp. melo]7.3e-4578.29Show/hide
Query:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG
        MDSP+ SGMLTPPIY+AVSVPFRWEEEPGKPRFS+A  + SA+ SPSLELPPRLL    +PRSEC SSFR         DEKSSLFMKKRGWFGSWRKRG
Subjt:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG

Query:  LNLKGKREQIGIGGLVFPSLELEESFSSK
        LNL+GKREQIGIGGLVFPSLELEES  SK
Subjt:  LNLKGKREQIGIGGLVFPSLELEESFSSK

XP_004140632.2 uncharacterized protein At4g00950 [Cucumis sativus]4.7e-5266.85Show/hide
Query:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG
        MDSP+ SGMLTPPIY AVSVPF WEEEPGKPRFS+A    S +ASPSLELPPRLL    +PRSEC SSFR         DEKSSLFMKKRGWFGSWRKRG
Subjt:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG

Query:  LNLKGKREQIGIGGLVFPSLELEESFSSK--------------------------ESVCEGLKHMVPSWRSKKLKRET
        LNL+GKREQIG GGLVFPSLELEES SSK                          ESVCEGLKH+VPSWRS+++KRET
Subjt:  LNLKGKREQIGIGGLVFPSLELEESFSSK--------------------------ESVCEGLKHMVPSWRSKKLKRET

XP_008459763.1 PREDICTED: uncharacterized protein At4g00950 [Cucumis melo]5.0e-5468.54Show/hide
Query:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG
        MDSP+ SGMLTPPIY+AVSVPFRWEEEPGKPRFS+A  + SA+ SPSLELPPRLL    +PRSEC SSFR         DEKSSLFMKKRGWFGSWRKRG
Subjt:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG

Query:  LNLKGKREQIGIGGLVFPSLELEESFSSK--------------------------ESVCEGLKHMVPSWRSKKLKRET
        LNL+GKREQIGIGGLVFPSLELEES  SK                          ESVCEGLKH+VPSWRS+KLKRET
Subjt:  LNLKGKREQIGIGGLVFPSLELEESFSSK--------------------------ESVCEGLKHMVPSWRSKKLKRET

XP_023005080.1 uncharacterized protein LOC111498174 [Cucurbita maxima]2.1e-3960Show/hide
Query:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG
        MDSPERSG LTPPIYAAVSVPFRWEEEPGKPRFS+   T +   SP LELPPRLLLM+++ RSE  SSFRMMGS     DE SSLFMK+RGWFGSWR   
Subjt:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG

Query:  LNLKGKREQIGIGGLVFPSLELE---------ESFSSK----------ESVCEGLKHMVPSWRSKKLKRE
           + KR++      VFPSLE E          SFSS            SVCEGLKH+VPSWR K+LK++
Subjt:  LNLKGKREQIGIGGLVFPSLELE---------ESFSSK----------ESVCEGLKHMVPSWRSKKLKRE

XP_038875382.1 uncharacterized protein At4g00950-like [Benincasa hispida]4.0e-6778.09Show/hide
Query:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSAT-ATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKR
        MDSPERSG LTPPIYAAVS+PFRWEEEPGKPRFSSAT A+ASAAASPSLELPPRLLL+D++PRSEC SSFRMMGSSS SPDEKSSLFMKK GWFGSWRKR
Subjt:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSAT-ATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKR

Query:  GLNLKGKREQIGIGGLVFPSLELEESFSSK-------------------------ESVCEGLKHMVPSWRSKKLKRET
        GLNL+GKREQIGIGGLVFPS+ELEES SSK                         ESVCEGLKHMVPSWRSK+LKRET
Subjt:  GLNLKGKREQIGIGGLVFPSLELEESFSSK-------------------------ESVCEGLKHMVPSWRSKKLKRET

TrEMBL top hitse value%identityAlignment
A0A0A0KDR5 Uncharacterized protein2.3e-5266.85Show/hide
Query:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG
        MDSP+ SGMLTPPIY AVSVPF WEEEPGKPRFS+A    S +ASPSLELPPRLL    +PRSEC SSFR         DEKSSLFMKKRGWFGSWRKRG
Subjt:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG

Query:  LNLKGKREQIGIGGLVFPSLELEESFSSK--------------------------ESVCEGLKHMVPSWRSKKLKRET
        LNL+GKREQIG GGLVFPSLELEES SSK                          ESVCEGLKH+VPSWRS+++KRET
Subjt:  LNLKGKREQIGIGGLVFPSLELEESFSSK--------------------------ESVCEGLKHMVPSWRSKKLKRET

A0A1S3CBE3 uncharacterized protein At4g009502.4e-5468.54Show/hide
Query:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG
        MDSP+ SGMLTPPIY+AVSVPFRWEEEPGKPRFS+A  + SA+ SPSLELPPRLL    +PRSEC SSFR         DEKSSLFMKKRGWFGSWRKRG
Subjt:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG

Query:  LNLKGKREQIGIGGLVFPSLELEESFSSK--------------------------ESVCEGLKHMVPSWRSKKLKRET
        LNL+GKREQIGIGGLVFPSLELEES  SK                          ESVCEGLKH+VPSWRS+KLKRET
Subjt:  LNLKGKREQIGIGGLVFPSLELEESFSSK--------------------------ESVCEGLKHMVPSWRSKKLKRET

A0A5A7TEV4 DUF688 family protein3.5e-4578.29Show/hide
Query:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG
        MDSP+ SGMLTPPIY+AVSVPFRWEEEPGKPRFS+A  + SA+ SPSLELPPRLL    +PRSEC SSFR         DEKSSLFMKKRGWFGSWRKRG
Subjt:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG

Query:  LNLKGKREQIGIGGLVFPSLELEESFSSK
        LNL+GKREQIGIGGLVFPSLELEES  SK
Subjt:  LNLKGKREQIGIGGLVFPSLELEESFSSK

A0A6J1KTY4 uncharacterized protein LOC1114981741.0e-3960Show/hide
Query:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG
        MDSPERSG LTPPIYAAVSVPFRWEEEPGKPRFS+   T +   SP LELPPRLLLM+++ RSE  SSFRMMGS     DE SSLFMK+RGWFGSWR   
Subjt:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG

Query:  LNLKGKREQIGIGGLVFPSLELE---------ESFSSK----------ESVCEGLKHMVPSWRSKKLKRE
           + KR++      VFPSLE E          SFSS            SVCEGLKH+VPSWR K+LK++
Subjt:  LNLKGKREQIGIGGLVFPSLELE---------ESFSSK----------ESVCEGLKHMVPSWRSKKLKRE

E5GCM9 Uncharacterized protein3.5e-4578.29Show/hide
Query:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG
        MDSP+ SGMLTPPIY+AVSVPFRWEEEPGKPRFS+A  + SA+ SPSLELPPRLL    +PRSEC SSFR         DEKSSLFMKKRGWFGSWRKRG
Subjt:  MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRG

Query:  LNLKGKREQIGIGGLVFPSLELEESFSSK
        LNL+GKREQIGIGGLVFPSLELEES  SK
Subjt:  LNLKGKREQIGIGGLVFPSLELEESFSSK

SwissProt top hitse value%identityAlignment
Q9M160 Uncharacterized protein At4g009507.4e-0831.58Show/hide
Query:  SGMLTPPIYAAV--SVPFRWEEEPGKPRFSSATATASAAASP-------------SLELPPRLLLMDR--------------------------------
        S  ++ PI++++  SVPF WEEEPGKP+  S ++++S+++SP             SLELPPRL L+++                                
Subjt:  SGMLTPPIYAAV--SVPFRWEEEPGKPRFSSATATASAAASP-------------SLELPPRLLLMDR--------------------------------

Query:  ----MPRSECYSSFRM----------MGSSSLSPDEKSSL-FMKKR---GWFGSWRKRGLNLKGKREQIGIGGLVFP-SLELEESFSSKE
               ++CY SFR           +GS         SL  +KKR   G+FG  R+R   LKGK E  G G  VFP S++ E  +S KE
Subjt:  ----MPRSECYSSFRM----------MGSSSLSPDEKSSL-FMKKR---GWFGSWRKRGLNLKGKREQIGIGGLVFP-SLELEESFSSKE

Arabidopsis top hitse value%identityAlignment
AT2G46535.1 unknown protein5.1e-0440.74Show/hide
Query:  SPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLL
        SP    +   PI+   SVPF WE++PGKP+          +    L+LPPRLLL
Subjt:  SPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLL

AT4G00950.1 Protein of unknown function (DUF688)5.3e-0931.58Show/hide
Query:  SGMLTPPIYAAV--SVPFRWEEEPGKPRFSSATATASAAASP-------------SLELPPRLLLMDR--------------------------------
        S  ++ PI++++  SVPF WEEEPGKP+  S ++++S+++SP             SLELPPRL L+++                                
Subjt:  SGMLTPPIYAAV--SVPFRWEEEPGKPRFSSATATASAAASP-------------SLELPPRLLLMDR--------------------------------

Query:  ----MPRSECYSSFRM----------MGSSSLSPDEKSSL-FMKKR---GWFGSWRKRGLNLKGKREQIGIGGLVFP-SLELEESFSSKE
               ++CY SFR           +GS         SL  +KKR   G+FG  R+R   LKGK E  G G  VFP S++ E  +S KE
Subjt:  ----MPRSECYSSFRM----------MGSSSLSPDEKSSL-FMKKR---GWFGSWRKRGLNLKGKREQIGIGGLVFP-SLELEESFSSKE

AT4G27810.1 unknown protein6.0e-0543.86Show/hide
Query:  GMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASP----------SLELPPRL
        G+ TPP+  A SVPF WEE PGKPR S      ++  +            LELPPRL
Subjt:  GMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASP----------SLELPPRL

AT5G53030.1 unknown protein3.2e-0654Show/hide
Query:  GMLTPPIYAAVSVPFRWEEEPGKPRFSSATATAS-AAASPSLELPPRLLL
        G+ TPP+  A SVPF WEE PGKPR     A  +      SLELPPRL+L
Subjt:  GMLTPPIYAAVSVPFRWEEEPGKPRFSSATATAS-AAASPSLELPPRLLL

AT5G53030.2 unknown protein3.2e-0654Show/hide
Query:  GMLTPPIYAAVSVPFRWEEEPGKPRFSSATATAS-AAASPSLELPPRLLL
        G+ TPP+  A SVPF WEE PGKPR     A  +      SLELPPRL+L
Subjt:  GMLTPPIYAAVSVPFRWEEEPGKPRFSSATATAS-AAASPSLELPPRLLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCACCAGAACGCTCAGGGATGCTAACTCCACCAATCTACGCCGCCGTCTCGGTCCCGTTTCGGTGGGAAGAAGAGCCAGGCAAGCCTAGGTTCAGTTCTGCCAC
CGCCACCGCCTCCGCCGCCGCCTCCCCGAGCTTGGAGTTGCCTCCAAGGCTTTTGTTAATGGACAGAATGCCAAGATCTGAGTGTTATTCTTCCTTTAGAATGATGGGGT
CTTCTTCTTTGAGTCCCGATGAGAAGAGTTCTTTGTTTATGAAGAAAAGAGGATGGTTTGGTTCATGGAGAAAAAGGGGTTTGAATTTGAAGGGAAAAAGAGAACAAATT
GGTATTGGAGGGCTTGTGTTTCCATCCTTGGAATTGGAAGAGAGTTTTAGTTCAAAAGAAAGTGTATGTGAAGGTTTAAAGCATATGGTTCCATCATGGAGAAGCAAAAA
GCTGAAGAGAGAGACTTAG
mRNA sequenceShow/hide mRNA sequence
TTTCAAGTCTACCTCTGTTTTCAATCCCACACCTCCCCTTAATGGACTCACCAGAACGCTCAGGGATGCTAACTCCACCAATCTACGCCGCCGTCTCGGTCCCGTTTCGG
TGGGAAGAAGAGCCAGGCAAGCCTAGGTTCAGTTCTGCCACCGCCACCGCCTCCGCCGCCGCCTCCCCGAGCTTGGAGTTGCCTCCAAGGCTTTTGTTAATGGACAGAAT
GCCAAGATCTGAGTGTTATTCTTCCTTTAGAATGATGGGGTCTTCTTCTTTGAGTCCCGATGAGAAGAGTTCTTTGTTTATGAAGAAAAGAGGATGGTTTGGTTCATGGA
GAAAAAGGGGTTTGAATTTGAAGGGAAAAAGAGAACAAATTGGTATTGGAGGGCTTGTGTTTCCATCCTTGGAATTGGAAGAGAGTTTTAGTTCAAAAGAAAGTGTATGT
GAAGGTTTAAAGCATATGGTTCCATCATGGAGAAGCAAAAAGCTGAAGAGAGAGACTTAGTTTGATTTTTTGTAATTTTCAACCAATTTGCAATAATGGAAGTTCCAAAT
TAAGCCTGTAAAAAATGTGTTGATGTTGATTTCTCTCTGTGTTTTCAAGTCTTTTCTTGAGATTAGTTGGGAAAATTTGCCTTTTATCTTTGACTATGTTAAAGACTATT
TCCATAACATATAATGGTGCAACTAGCTAGCCTTTATCCAAACTGTTTTTAGGAGAATTTTTAAAAATAGAAAAATTATTTACACAAAATAGCAAAATTTTCAAATAGTT
GTGATAGACACTGATTGAAGTCTATCAGAGTCTATCACTAATAGAATTGATAGAAGTAATGCTGATAGAAGTCTATCCATGTATATAAATGTTTTTTTTG
Protein sequenceShow/hide protein sequence
MDSPERSGMLTPPIYAAVSVPFRWEEEPGKPRFSSATATASAAASPSLELPPRLLLMDRMPRSECYSSFRMMGSSSLSPDEKSSLFMKKRGWFGSWRKRGLNLKGKREQI
GIGGLVFPSLELEESFSSKESVCEGLKHMVPSWRSKKLKRET