; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G016770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding KH domain-containing protein
Genome locationchr09:25202174..25210198
RNA-Seq ExpressionLsi09G016770
SyntenyLsi09G016770
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR004088 - K Homology domain, type 1
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34230.1 hypothetical protein [Cucumis melo subsp. melo]3.4e-15091.44Show/hide
Query:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQP DIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIK--------------------
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLRKTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIK                    
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIK--------------------

Query:  -VALAKQRVDEYIYSQVIRQAGVQQTA
         VALAKQRVDEYIYSQVIRQAGVQQTA
Subjt:  -VALAKQRVDEYIYSQVIRQAGVQQTA

KAA0039772.1 RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo var. makuwa]9.0e-14383.52Show/hide
Query:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQP DIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLR                             +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA
        GATIK                     VALAKQRVDEYIYSQVIRQAGVQQTA
Subjt:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA

XP_008459768.1 PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo]9.0e-14383.52Show/hide
Query:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQP DIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLR                             +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA
        GATIK                     VALAKQRVDEYIYSQVIRQAGVQQTA
Subjt:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA

XP_011656837.1 RNA-binding KH domain-containing protein PEPPER [Cucumis sativus]1.2e-14283.24Show/hide
Query:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQP DIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASD+SAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLR                             +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA
        GATIK                     VALAKQRVDEYIYSQVIRQAGVQQTA
Subjt:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA

XP_038875599.1 flowering locus K homology domain-like isoform X1 [Benincasa hispida]2.5e-14583.81Show/hide
Query:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQP DIPLYPS+P MAPLPVSMPLPGTLLVSEPGH+VTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDN+NSVTDAEKALQQIAALILKEDGTS+EELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR                             +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA
        GATIK                     VALAKQRVDEYIYSQVIRQAGVQQTA
Subjt:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA

TrEMBL top hitse value%identityAlignment
A0A0A0KCF8 Uncharacterized protein5.7e-14383.24Show/hide
Query:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQP DIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASD+SAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLR                             +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA
        GATIK                     VALAKQRVDEYIYSQVIRQAGVQQTA
Subjt:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA

A0A1S3CB11 RNA-binding KH domain-containing protein PEPPER-like4.3e-14383.52Show/hide
Query:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQP DIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLR                             +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA
        GATIK                     VALAKQRVDEYIYSQVIRQAGVQQTA
Subjt:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA

A0A5A7T8H9 RNA-binding KH domain-containing protein PEPPER-like4.3e-14383.52Show/hide
Query:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQP DIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLR                             +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------------------------KTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA
        GATIK                     VALAKQRVDEYIYSQVIRQAGVQQTA
Subjt:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA

A0A6J1H4F3 flowering locus K homology domain-like1.5e-14081.82Show/hide
Query:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQP DIPLYPSMPAMAPLPVSMPLPGTLLVS+ GH+VTGKRRREDD IV NSEA DVSAPKRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKD ENSVTDAEKALQ IAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGA+ITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKT-------------------------NLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGD+PAVLKALEEIGNQLR                             +VNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKT-------------------------NLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA
        GATIK                     VALAKQRVDEYIYSQ+IRQAGVQQTA
Subjt:  GATIK---------------------VALAKQRVDEYIYSQVIRQAGVQQTA

E5GCN1 Uncharacterized protein1.6e-15091.44Show/hide
Query:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQP DIPLYPSMPAMAPLPVSMPLPGTLLVSEPGH+VTGKRRREDD IV NS+ASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIK--------------------
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLRKTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIK                    
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIK--------------------

Query:  -VALAKQRVDEYIYSQVIRQAGVQQTA
         VALAKQRVDEYIYSQVIRQAGVQQTA
Subjt:  -VALAKQRVDEYIYSQVIRQAGVQQTA

SwissProt top hitse value%identityAlignment
F4KDN0 KH domain-containing protein HEN43.7e-1432.75Show/hide
Query:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRL
        DV+F+I+  ++  G VIG  G  ++ +  ET A I + + +   EER+I +++ +N E   + A+KA+  I + + +     I    +  G  ++ T RL
Subjt:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR
        ++  SQ G ++G  G  + ++R ++GA+I IL   Q P C S  E+D+VVQI+G+ P V +A+  I ++LR
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR

P57722 Poly(rC)-binding protein 31.6e-0928.64Show/hide
Query:  PIVPNSEASDVS-------APKRQAKAHD------VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAEKA
        PI+P+S    +S         K ++K  +      +  R+++  K++G +IGK G  ++K+REE+ A I I++      ER++ I+        TDA   
Subjt:  PIVPNSEASDVS-------APKRQAKAHD------VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAEKA

Query:  LQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEI
           + A   +ED  +       T      T+RL++  SQ GSLIG  G  I+++R S+GA + + A + LP     + ++R V ISG   A+++ +++I
Subjt:  LQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEI

P58223 KH domain-containing protein At4g183758.5e-1131.35Show/hide
Query:  VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIII------------SSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGT
        V++RI+ P   +G VIGK G  I  +R  TKA IK+ D +    +RVI I             +K     +  A+ AL ++   I+  D  +    K   
Subjt:  VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIII------------SSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGT

Query:  GHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPN-QLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKTN
                RLL+  SQ+ SLIG +G+NI+++R  + AS+ +++ +   P    A E D VV ISG+  +V +AL  +   + K N
Subjt:  GHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPN-QLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKTN

Q9SR13 Flowering locus K homology domain2.3e-1634.3Show/hide
Query:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRL
        + +FR++VP++++G +IG+ G  I+K+ EET+A IKI D      ER +++S K+  E+S+  +   L ++   I+  DG   E  +       +   RL
Subjt:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK
        L+  SQAGSLIG  G  ++ ++ +S   + +L    LP+ A   + DRVV++ G+  +V +ALE I + LRK
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK

Q9SZH4 RNA-binding KH domain-containing protein PEPPER1.8e-1631.98Show/hide
Query:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDG-TSIEELKVGTGHVAANTIRL
        D +FR++VP  ++G +IG+ G  I+K+ EET+A IK+ D      +R+++IS K+   +      A+  +  +  +  G    ++  V       +++RL
Subjt:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDG-TSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK
        L+A +QA +LIG  G  I+ +  +SGAS+ IL+  + P  A+  + +R+V + G+   +LKALE I   LR+
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK

Arabidopsis top hitse value%identityAlignment
AT1G14170.2 RNA-binding KH domain-containing protein5.6e-1828.06Show/hide
Query:  HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSVTDAEKALQQIAALIL----KEDGTSIEELKV
        HD ++R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E          V  A  AL ++  +++    ++DGT  +    
Subjt:  HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSVTDAEKALQQIAALIL----KEDGTSIEELKV

Query:  GTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKTNLAVNYVTFE-----
          G     T+R+L+   Q G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+   V +AL ++ + L        ++        
Subjt:  GTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRKTNLAVNYVTFE-----

Query:  ------MLISETL-----------------------------VGGLIGIGGFNISRIRNESGATIKVALAKQRVDEYI
              ML+S  L                             VGG+IG GG  I++IR E+GATI+V  ++   D+ I
Subjt:  ------MLISETL-----------------------------VGGLIGIGGFNISRIRNESGATIKVALAKQRVDEYI

AT3G04610.1 RNA-binding KH domain-containing protein1.6e-1734.3Show/hide
Query:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRL
        + +FR++VP++++G +IG+ G  I+K+ EET+A IKI D      ER +++S K+  E+S+  +   L ++   I+  DG   E  +       +   RL
Subjt:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK
        L+  SQAGSLIG  G  ++ ++ +S   + +L    LP+ A   + DRVV++ G+  +V +ALE I + LRK
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK

AT4G26000.1 RNA-binding KH domain-containing protein1.2e-1731.98Show/hide
Query:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDG-TSIEELKVGTGHVAANTIRL
        D +FR++VP  ++G +IG+ G  I+K+ EET+A IK+ D      +R+++IS K+   +      A+  +  +  +  G    ++  V       +++RL
Subjt:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDG-TSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK
        L+A +QA +LIG  G  I+ +  +SGAS+ IL+  + P  A+  + +R+V + G+   +LKALE I   LR+
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRK

AT5G15270.1 RNA-binding KH domain-containing protein7.8e-2032.14Show/hide
Query:  PGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKA----------HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSK
        P H  + ++R       P S+  D    KR+ +            D +FR + P K+IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S  
Subjt:  PGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKA----------HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSK

Query:  DNENSVTDAEK-------ALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDR
        D  N+  D EK       AL +I   ++ +D  S E+   G   V   T +LL+   Q G ++G  GQ ++ +R+ +GA I I+    +PLCA    SD 
Subjt:  DNENSVTDAEK-------ALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDR

Query:  VVQISGDIPAVLKALEEIGNQLRK
        ++QISG++  V KAL +I ++L +
Subjt:  VVQISGDIPAVLKALEEIGNQLRK

AT5G15270.2 RNA-binding KH domain-containing protein7.8e-2032.14Show/hide
Query:  PGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKA----------HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSK
        P H  + ++R       P S+  D    KR+ +            D +FR + P K+IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S  
Subjt:  PGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKA----------HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSK

Query:  DNENSVTDAEK-------ALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDR
        D  N+  D EK       AL +I   ++ +D  S E+   G   V   T +LL+   Q G ++G  GQ ++ +R+ +GA I I+    +PLCA    SD 
Subjt:  DNENSVTDAEK-------ALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDR

Query:  VVQISGDIPAVLKALEEIGNQLRK
        ++QISG++  V KAL +I ++L +
Subjt:  VVQISGDIPAVLKALEEIGNQLRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACCAGATGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCCCTTCCTGTTTCTATGCCCTTACCTGGGACTCTATTGGTTTCCGAGCCCGGACATTCCGT
CACCGGGAAACGCCGACGAGAGGACGACCCGATCGTTCCCAATTCGGAAGCCTCAGATGTATCGGCTCCCAAGAGACAGGCGAAGGCTCATGACGTGCTTTTCAGAATCG
TTGTGCCCTCCAAGCAGATCGGGAAGGTTATTGGTAAAGTTGGTTGCCGAATCCAGAAGGTTCGTGAGGAGACCAAAGCTACAATTAAGATTGCGGATGCAGTCGCGCGG
TATGAAGAACGTGTTATCATTATAAGTTCCAAGGACAATGAGAATTCGGTTACTGATGCGGAGAAAGCACTTCAGCAAATTGCAGCACTGATATTGAAGGAAGATGGTAC
AAGCATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCCAATACTATAAGGCTCCTAATAGCAGGATCTCAAGCAGGTTCCTTGATTGGTGCCTCAGGTCAAAATA
TTGAGAAATTGAGGAATTCTTCTGGTGCATCAATTACGATTCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCTGACCGAGTGGTGCAAATATCAGGG
GATATTCCGGCAGTTTTGAAGGCTCTTGAGGAGATTGGCAATCAGCTAAGGAAAACCAATCTTGCAGTTAATTATGTAACCTTCGAGATGTTGATATCGGAGACGTTGGT
GGGTGGGTTGATCGGTATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGGGCTACTATCAAGGTAGCATTGGCAAAGCAAAGGGTTGATGAATATATTTATT
CTCAGGTGATTCGACAAGCTGGTGTTCAACAGACAGCGTAG
mRNA sequenceShow/hide mRNA sequence
TGCAAATTTAACCTAAGAAGAAAATGCCTATGCCGAGTACATACAGTGCAGTATGCTAAAATAGTCGTATATATAAAAGTAAAACTAGCCCTTTCTGTTCTAGCTCTCCT
TCTCCATCGCCTTGTATTGCTTCTCTATGGTATCATCAACTATCAACATTTCTCTTCTGCATTCTCGTCTTCGCACTCCCACCCTGCTACGGCCATCTTCAATTCCTCAC
TGCCCTGAAGATTCCTCCTAATATGCAACCAGATGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCCCTTCCTGTTTCTATGCCCTTACCTGGGACTCTATTGG
TTTCCGAGCCCGGACATTCCGTCACCGGGAAACGCCGACGAGAGGACGACCCGATCGTTCCCAATTCGGAAGCCTCAGATGTATCGGCTCCCAAGAGACAGGCGAAGGCT
CATGACGTGCTTTTCAGAATCGTTGTGCCCTCCAAGCAGATCGGGAAGGTTATTGGTAAAGTTGGTTGCCGAATCCAGAAGGTTCGTGAGGAGACCAAAGCTACAATTAA
GATTGCGGATGCAGTCGCGCGGTATGAAGAACGTGTTATCATTATAAGTTCCAAGGACAATGAGAATTCGGTTACTGATGCGGAGAAAGCACTTCAGCAAATTGCAGCAC
TGATATTGAAGGAAGATGGTACAAGCATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCCAATACTATAAGGCTCCTAATAGCAGGATCTCAAGCAGGTTCCTTG
ATTGGTGCCTCAGGTCAAAATATTGAGAAATTGAGGAATTCTTCTGGTGCATCAATTACGATTCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCTGA
CCGAGTGGTGCAAATATCAGGGGATATTCCGGCAGTTTTGAAGGCTCTTGAGGAGATTGGCAATCAGCTAAGGAAAACCAATCTTGCAGTTAATTATGTAACCTTCGAGA
TGTTGATATCGGAGACGTTGGTGGGTGGGTTGATCGGTATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGGGCTACTATCAAGGTAGCATTGGCAAAGCAA
AGGGTTGATGAATATATTTATTCTCAGGTGATTCGACAAGCTGGTGTTCAACAGACAGCGTAGGTTTTCCTTCATAACTTCTGCAGATGTGGTAATCTCAAACAAAAAGA
GTGGTTAGTTGTAATGGCAACATCTGCATGGGAAGCTCTGAAGGACAGCTCCTACAAACTTCATTCTCATGACTGGGTGGATATGATGAGTAATACAGTTAATGAAGTGC
TGCAGGATTTTGGAATAATGGCTTCTTTTTTTTTTTTAATTTTAATTTTTTTTTAAATGTGACATATTGTAATTGTGGCAAATAGTTGTCTGAATATTTTCTATATTAAC
TACTTAAAGAGTTTCTATATAGCTATTAAAGGCTGCTAGGAAAAGTTTGGCTTTGAGCTCTGAGTCTTGAACTGAACTTTGATTTCTAATTTGGTCAGTATCTTATTGCT
TTTAGTTATGACCATTTAACGTACAAATGTAACTTCTTTTGGGTATGAAAATGCCAGGTTAAGTCATTTCTCTATAGCCATACAAGTTGCTGAAGCCAAATTTATTGAAC
AATTTTGTGGAGAAGAGTTCTAAAAAGTTTGGAAAATAAATCATTTTATTTGTTACTTTTAACTT
Protein sequenceShow/hide protein sequence
MQPDDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHSVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVAR
YEERVIIISSKDNENSVTDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISG
DIPAVLKALEEIGNQLRKTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVALAKQRVDEYIYSQVIRQAGVQQTA