; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G016830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G016830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLeucine carboxyl methyltransferase 1 homolog
Genome locationchr09:25267634..25269580
RNA-Seq ExpressionLsi09G016830
SyntenyLsi09G016830
Gene Ontology termsGO:0032259 - methylation (biological process)
GO:1900458 - negative regulation of brassinosteroid mediated signaling pathway (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016020 - membrane (cellular component)
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity (molecular function)
InterPro domainsIPR007213 - Methyltransferase Ppm1/Ppm2/Tcmp
IPR016651 - Leucine carboxyl methyltransferase 1
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013821.1 tRNA wybutosine-synthesizing protein 4 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-5294.83Show/hide
Query:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ
        MAKA PDSQSN AAVQATNDDASASKLSCVRKGYMKDD+IHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNV SNTEEHTKKQILSLGAGFDTTYFQ
Subjt:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ

Query:  LQASCLIRSRATTSLA
        LQASCL RSRA TSLA
Subjt:  LQASCLIRSRATTSLA

KAG7025343.1 tRNA wybutosine-synthesizing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4795.19Show/hide
Query:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ
        MAKA PDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIH FVRRP+KRSPIINRGYFARWAALR LLFQFLNVG+NTEEHTKKQILSLGAGFDTTYFQ
Subjt:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ

Query:  LQAS
        LQAS
Subjt:  LQAS

XP_004140513.1 leucine carboxyl methyltransferase 1 homolog [Cucumis sativus]3.0e-4797.06Show/hide
Query:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ
        MAKA PDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVR+PVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDT YFQ
Subjt:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ

Query:  LQ
        LQ
Subjt:  LQ

XP_008459781.1 PREDICTED: tRNA wybutosine-synthesizing protein 4 [Cucumis melo]1.3e-4797.06Show/hide
Query:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ
        MAKA PDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVR+PVKRSPIINRGYF+RWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ
Subjt:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ

Query:  LQ
        LQ
Subjt:  LQ

XP_022153192.1 tRNA wybutosine-synthesizing protein 4 [Momordica charantia]1.9e-4986.67Show/hide
Query:  PNLSFTIALTSKLSGDSKMAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEH
        PNL  +I+L +KLSG+ KMA A PDSQSNRAAVQATNDDASASKLSCVR+GYMKDDYIH FVR+PVKRSPIINRGYFARWAALRKLLFQFLNVGSN EE 
Subjt:  PNLSFTIALTSKLSGDSKMAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEH

Query:  TKKQILSLGAGFDTTYFQLQ
        TKKQILSLGAGFDT YFQLQ
Subjt:  TKKQILSLGAGFDTTYFQLQ

TrEMBL top hitse value%identityAlignment
A0A0A0KCH5 Leucine carboxyl methyltransferase 1 homolog1.4e-4797.06Show/hide
Query:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ
        MAKA PDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVR+PVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDT YFQ
Subjt:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ

Query:  LQ
        LQ
Subjt:  LQ

A0A1S3CAZ1 Leucine carboxyl methyltransferase 1 homolog6.4e-4897.06Show/hide
Query:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ
        MAKA PDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVR+PVKRSPIINRGYF+RWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ
Subjt:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ

Query:  LQ
        LQ
Subjt:  LQ

A0A6J1DI95 Leucine carboxyl methyltransferase 1 homolog9.0e-5086.67Show/hide
Query:  PNLSFTIALTSKLSGDSKMAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEH
        PNL  +I+L +KLSG+ KMA A PDSQSNRAAVQATNDDASASKLSCVR+GYMKDDYIH FVR+PVKRSPIINRGYFARWAALRKLLFQFLNVGSN EE 
Subjt:  PNLSFTIALTSKLSGDSKMAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEH

Query:  TKKQILSLGAGFDTTYFQLQ
        TKKQILSLGAGFDT YFQLQ
Subjt:  TKKQILSLGAGFDTTYFQLQ

A0A6J1H6Q7 Leucine carboxyl methyltransferase 1 homolog4.2e-4795.1Show/hide
Query:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ
        MAKA PDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIH FVRRP+KRSPIINRGYFARWAALR LLFQFLNVG+NTEEHTKKQILSLGAGFDTTYFQ
Subjt:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ

Query:  LQ
        LQ
Subjt:  LQ

A0A6J1L149 Leucine carboxyl methyltransferase 1 homolog4.2e-4795.1Show/hide
Query:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ
        MAKA PDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIH FVRRP+KRSPIINRGYFARWAALR LLFQFLNVG+NTEEHTKKQILSLGAGFDTTYFQ
Subjt:  MAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQ

Query:  LQ
        LQ
Subjt:  LQ

SwissProt top hitse value%identityAlignment
O60294 tRNA wybutosine-synthesizing protein 48.5e-1342Show/hide
Query:  PDSQSNRA-AVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQLQAS
        P S+  RA AVQ TND ++ SK S   +GY++D +  L V    +R+P+I+RGY+ R  A+R  +  FL      +   + QILSLGAGFD+ YF+L+ +
Subjt:  PDSQSNRA-AVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQLQAS

Q4ICG8 Leucine carboxyl methyltransferase 11.9e-1245.1Show/hide
Query:  SQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRR----PVKRSPIINRGYFARWAALRKLLFQFLNVGSNT-EEHTKKQILSLGAGFDTTYFQLQ
        S ++ + +Q T+ DAS S+LS V  GY+ D Y   FVR       +R PIINRG +AR  +L  L+  FL+   +T  + T KQI+SLGAG DT  F+L 
Subjt:  SQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRR----PVKRSPIINRGYFARWAALRKLLFQFLNVGSNT-EEHTKKQILSLGAGFDTTYFQLQ

Query:  AS
        AS
Subjt:  AS

Q5XIA3 tRNA wybutosine-synthesizing protein 41.0e-1340.19Show/hide
Query:  PPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQLQAS
        P   Q     VQ+TND +S SK S   +GY+ D +  L V   V+R+P+I+RGY+ R  A+R  +  FL++       T+ QILSLG+G D+ YF+L+A+
Subjt:  PPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQLQAS

Query:  CLIRSRA
         L+   A
Subjt:  CLIRSRA

Q8BYR1 tRNA wybutosine-synthesizing protein 42.4e-1542.06Show/hide
Query:  PPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQLQAS
        P   Q     VQ+TND +S SK S    GY++D +  L V  PV+R+P+I+RGY+ R  A+R  +  FL + S     T+ QILSLG+G D+ YF+L+A+
Subjt:  PPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQLQAS

Query:  CLIRSRA
         L+   A
Subjt:  CLIRSRA

Q8VY08 Leucine carboxyl methyltransferase 1 homolog3.2e-3680Show/hide
Query:  DSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQL
        +S+SNRAAVQATNDDASASKLSCV+KGYMKDDY+HLFV+RPV+RSPIINRGYF+RWAA RKL+ QFL  G++    +KKQILSLGAGFDTTYFQL
Subjt:  DSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQL

Arabidopsis top hitse value%identityAlignment
AT1G02100.1 Leucine carboxyl methyltransferase2.3e-3780Show/hide
Query:  DSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQL
        +S+SNRAAVQATNDDASASKLSCV+KGYMKDDY+HLFV+RPV+RSPIINRGYF+RWAA RKL+ QFL  G++    +KKQILSLGAGFDTTYFQL
Subjt:  DSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQL

AT1G02100.2 Leucine carboxyl methyltransferase2.3e-3780Show/hide
Query:  DSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQL
        +S+SNRAAVQATNDDASASKLSCV+KGYMKDDY+HLFV+RPV+RSPIINRGYF+RWAA RKL+ QFL  G++    +KKQILSLGAGFDTTYFQL
Subjt:  DSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQL

AT1G02100.3 Leucine carboxyl methyltransferase2.3e-3780Show/hide
Query:  DSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQL
        +S+SNRAAVQATNDDASASKLSCV+KGYMKDDY+HLFV+RPV+RSPIINRGYF+RWAA RKL+ QFL  G++    +KKQILSLGAGFDTTYFQL
Subjt:  DSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGYFARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTAATTCGAAACAGAGGGCAAGGGTTTTGTTCAATTCAGTTCCTATGCGATTCATCGCTGAAGTGAAAAGTGACCAAAGCTATTTTAGCATCCTTCCCCTCCCCAACTT
GTCTTTCACTATTGCGTTAACCTCGAAGCTCTCTGGCGATTCGAAAATGGCGAAGGCCCCTCCCGATTCGCAGAGCAACAGAGCAGCGGTGCAGGCCACCAACGACGACG
CCTCTGCCAGTAAACTATCATGTGTTAGAAAGGGATACATGAAAGACGACTACATACACCTTTTTGTACGAAGGCCTGTCAAGAGATCTCCAATTATCAATCGAGGTTAT
TTTGCCCGGTGGGCCGCACTGAGGAAGCTCCTCTTTCAATTCCTCAATGTTGGAAGTAATACAGAGGAACATACAAAGAAGCAGATATTATCGCTTGGAGCTGGCTTTGA
CACAACGTACTTCCAATTGCAGGCAAGCTGCTTAATTAGGTCACGGGCTACAACATCTTTAGCCTAG
mRNA sequenceShow/hide mRNA sequence
CCTAATTCGAAACAGAGGGCAAGGGTTTTGTTCAATTCAGTTCCTATGCGATTCATCGCTGAAGTGAAAAGTGACCAAAGCTATTTTAGCATCCTTCCCCTCCCCAACTT
GTCTTTCACTATTGCGTTAACCTCGAAGCTCTCTGGCGATTCGAAAATGGCGAAGGCCCCTCCCGATTCGCAGAGCAACAGAGCAGCGGTGCAGGCCACCAACGACGACG
CCTCTGCCAGTAAACTATCATGTGTTAGAAAGGGATACATGAAAGACGACTACATACACCTTTTTGTACGAAGGCCTGTCAAGAGATCTCCAATTATCAATCGAGGTTAT
TTTGCCCGGTGGGCCGCACTGAGGAAGCTCCTCTTTCAATTCCTCAATGTTGGAAGTAATACAGAGGAACATACAAAGAAGCAGATATTATCGCTTGGAGCTGGCTTTGA
CACAACGTACTTCCAATTGCAGGCAAGCTGCTTAATTAGGTCACGGGCTACAACATCTTTAGCCTAG
Protein sequenceShow/hide protein sequence
PNSKQRARVLFNSVPMRFIAEVKSDQSYFSILPLPNLSFTIALTSKLSGDSKMAKAPPDSQSNRAAVQATNDDASASKLSCVRKGYMKDDYIHLFVRRPVKRSPIINRGY
FARWAALRKLLFQFLNVGSNTEEHTKKQILSLGAGFDTTYFQLQASCLIRSRATTSLA