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Lsi09G017000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G017000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmajor pollen allergen Ole e 6-like
Genome locationchr09:25514369..25515547
RNA-Seq ExpressionLsi09G017000
SyntenyLsi09G017000
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0010223 - secondary shoot formation (biological process)
GO:0016121 - carotene catabolic process (biological process)
GO:1901601 - strigolactone biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR015333 - Pollen allergen ole e 6
IPR036466 - Pollen allergen ole e 6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146471.1 major pollen allergen Ole e 6 [Cucumis sativus]2.4e-2176.71Show/hide
Query:  HKMIAVVLMCIVVVAALQFTTANAEDI---EAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA
        +KMIA+ LMCIVVVAALQF  AN ED+   EAKFDAK+KSC+ETCEKECL  G+GQS+CEVKCDEDCDEKE A
Subjt:  HKMIAVVLMCIVVVAALQFTTANAEDI---EAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA

XP_038875643.1 major pollen allergen Ole e 6-like [Benincasa hispida]3.1e-2180.28Show/hide
Query:  KMIAVVLMCIVVVAALQFTTANAE--DIEAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA
        KMIAV  MCIVV+AALQF TAN E    EAKFDAK+KSCYETCEKECLE+G+GQ+FCEVKCDEDCDEKE A
Subjt:  KMIAVVLMCIVVVAALQFTTANAE--DIEAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA

XP_038891517.1 major pollen allergen Ole e 6-like [Benincasa hispida]2.2e-2280.56Show/hide
Query:  KMIAVVLMCIVVVAALQFTTANAEDI---EAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA
        KM+AV LMCIVVVAALQF TAN +++   EAKFDAK+KSCYETCEKECL +G+GQSFCEVKCDEDCDEKEVA
Subjt:  KMIAVVLMCIVVVAALQFTTANAEDI---EAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA

XP_038906677.1 major pollen allergen Ole e 6-like [Benincasa hispida]5.3e-2178.87Show/hide
Query:  KMIAVVLMCIVVVAALQFTTAN--AEDIEAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA
        K+IAV  MCIVV+AA QF TAN   E  EAKF+AK+KSCYETCEKECLE GNGQSFCEVKCDEDCDEKE A
Subjt:  KMIAVVLMCIVVVAALQFTTAN--AEDIEAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA

XP_038906682.1 major pollen allergen Ole e 6-like [Benincasa hispida]2.5e-2385.92Show/hide
Query:  KMIAVVLMCIVVVAALQFTTANAE--DIEAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA
        KMIAV LMCIVV+AALQFTTAN E    EAKFDAK+KSCYETCEKECLE GNGQSFCEVKCDEDCDEKE A
Subjt:  KMIAVVLMCIVVVAALQFTTANAE--DIEAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA

TrEMBL top hitse value%identityAlignment
A0A0A0KPA7 Uncharacterized protein1.2e-2176.71Show/hide
Query:  HKMIAVVLMCIVVVAALQFTTANAEDI---EAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA
        +KMIA+ LMCIVVVAALQF  AN ED+   EAKFDAK+KSC+ETCEKECL  G+GQS+CEVKCDEDCDEKE A
Subjt:  HKMIAVVLMCIVVVAALQFTTANAEDI---EAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA

A0A1S3C530 major pollen allergen Ole e 6-like2.6e-2176.71Show/hide
Query:  KMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA
        KMIA+ LMCIVVVAALQF +AN ED     EAKFDAK+KSC++TCEKECLE+G+GQS+CEVKCDEDC+EKEVA
Subjt:  KMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA

A0A1S4E2K0 carotenoid cleavage dioxygenase 7, chloroplastic isoform X11.4e-1967.5Show/hide
Query:  RLVEVHKMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVA
        R +   KM+ V+L+CIVV+AAL+F+ AN E+     E+KFDAK+KSCYE+CEKECL++G NGQSFCEVKCDEDCDEKEVA
Subjt:  RLVEVHKMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVA

A0A5D3BCS2 Major pollen allergen Ole e 6-like2.6e-2176.71Show/hide
Query:  KMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA
        KMIA+ LMCIVVVAALQF +AN ED     EAKFDAK+KSC++TCEKECLE+G+GQS+CEVKCDEDC+EKEVA
Subjt:  KMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA

A0A5D3DM52 Carotenoid cleavage dioxygenase 72.4e-1971.62Show/hide
Query:  KMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVA
        KM+ V+L+CIVV+AAL+F+ AN E+     E+KFDAK+KSCYE+CEKECL++G NGQSFCEVKCDEDCDEKEVA
Subjt:  KMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVA

SwissProt top hitse value%identityAlignment
O24172 Major pollen allergen Ole e 65.4e-0860.53Show/hide
Query:  DAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEV
        +A+FK CY+TC KEC + GNG +FCE+KCD DC  K+V
Subjt:  DAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGTCAGGCAGGTTATCCCGTAAGATTAGTCGAGGTGCATAAAATGATTGCAGTGGTTTTGATGTGCATTGTGGTGGTGGCTGCTTTGCAGTTTACCACTGCCAA
TGCTGAAGACATAGAGGCCAAATTTGATGCTAAATTCAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAGTGGCAATGGCCAAAGCTTTTGTGAAGTTAAAT
GTGATGAAGATTGTGATGAAAAGGAAGTTGCT
mRNA sequenceShow/hide mRNA sequence
ATGGACGGTCAGGCAGGTTATCCCGTAAGATTAGTCGAGGTGCATAAAATGATTGCAGTGGTTTTGATGTGCATTGTGGTGGTGGCTGCTTTGCAGTTTACCACTGCCAA
TGCTGAAGACATAGAGGCCAAATTTGATGCTAAATTCAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAGTGGCAATGGCCAAAGCTTTTGTGAAGTTAAAT
GTGATGAAGATTGTGATGAAAAGGAAGTTGCT
Protein sequenceShow/hide protein sequence
MDGQAGYPVRLVEVHKMIAVVLMCIVVVAALQFTTANAEDIEAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVA