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Lsi09G017290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G017290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:25934105..25934491
RNA-Seq ExpressionLsi09G017290
SyntenyLsi09G017290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039815.1 hypothetical protein E6C27_scaffold122G00900 [Cucumis melo var. makuwa]2.1e-3774.62Show/hide
Query:  MEKNQKRKGFMRRLYRAAKSAGKAKVKQSNPPTASTSLNNNDGGGDSFALSNEMRSASNPKRSV--ATVQKQTSSAHGGFRDGIGEMRGAYGGYGGGDEN
        MEKNQKRKGF+RRLYRAA+SAGKAKVKQ+NPPT STS N+ D G DSFA S+E  SASNP RSV  ATVQKQ SSAH           GAYGGYGGGDEN
Subjt:  MEKNQKRKGFMRRLYRAAKSAGKAKVKQSNPPTASTSLNNNDGGGDSFALSNEMRSASNPKRSV--ATVQKQTSSAHGGFRDGIGEMRGAYGGYGGGDEN

Query:  VDVKAATYILLVRERLKMERSMDRKVYSAN
        VDVKAATYILLV+ERLKMERSMDR+V+  N
Subjt:  VDVKAATYILLVRERLKMERSMDRKVYSAN

KAG6592959.1 hypothetical protein SDJN03_12435, partial [Cucurbita argyrosperma subsp. sororia]4.6e-2466.67Show/hide
Query:  MRRLYRAAKSAGKAKV--KQSNPPTASTSLNN--NDGGGDSFALSNEMRSASNPKRSVATV---QKQTSSAHGGFRDGIGEMRGAYGGYGGGDENVDVKA
        MRRLYRAA+SAGKAK   KQSNPP +          GG   F   +EMRS S P +S A     QKQ SSAHGGFRDG GEMRG YGGY GGDENVDVKA
Subjt:  MRRLYRAAKSAGKAKV--KQSNPPTASTSLNN--NDGGGDSFALSNEMRSASNPKRSVATV---QKQTSSAHGGFRDGIGEMRGAYGGYGGGDENVDVKA

Query:  ATYILLVRERLKMERSM
         TYIL VRERLKMERSM
Subjt:  ATYILLVRERLKMERSM

KGN46459.1 hypothetical protein Csa_005040 [Cucumis sativus]4.9e-3473.02Show/hide
Query:  MEKNQKRKGFMRRLYRAAKSAGKAKVKQSNPPTASTSLNNNDGGGDSFALSNEMRSASNPKRSVA--TVQKQTSSAHGGFRDGIGEMRGAYGGYGGGDEN
        ME  QKRKGF+RRLYRAA+SAGKAKVKQSNPPT STS N+ D G D FA S+E +SASNP R VA  TVQKQ SS H           GAYGGYGGGDEN
Subjt:  MEKNQKRKGFMRRLYRAAKSAGKAKVKQSNPPTASTSLNNNDGGGDSFALSNEMRSASNPKRSVA--TVQKQTSSAHGGFRDGIGEMRGAYGGYGGGDEN

Query:  VDVKAATYILLVRERLKMERSMDRKV
        VDVKAATYILLV+ERLKMERSMDR+V
Subjt:  VDVKAATYILLVRERLKMERSMDRKV

TrEMBL top hitse value%identityAlignment
A0A0A0KCA4 Uncharacterized protein2.4e-3473.02Show/hide
Query:  MEKNQKRKGFMRRLYRAAKSAGKAKVKQSNPPTASTSLNNNDGGGDSFALSNEMRSASNPKRSVA--TVQKQTSSAHGGFRDGIGEMRGAYGGYGGGDEN
        ME  QKRKGF+RRLYRAA+SAGKAKVKQSNPPT STS N+ D G D FA S+E +SASNP R VA  TVQKQ SS H           GAYGGYGGGDEN
Subjt:  MEKNQKRKGFMRRLYRAAKSAGKAKVKQSNPPTASTSLNNNDGGGDSFALSNEMRSASNPKRSVA--TVQKQTSSAHGGFRDGIGEMRGAYGGYGGGDEN

Query:  VDVKAATYILLVRERLKMERSMDRKV
        VDVKAATYILLV+ERLKMERSMDR+V
Subjt:  VDVKAATYILLVRERLKMERSMDRKV

A0A5A7TED2 Uncharacterized protein1.0e-3774.62Show/hide
Query:  MEKNQKRKGFMRRLYRAAKSAGKAKVKQSNPPTASTSLNNNDGGGDSFALSNEMRSASNPKRSV--ATVQKQTSSAHGGFRDGIGEMRGAYGGYGGGDEN
        MEKNQKRKGF+RRLYRAA+SAGKAKVKQ+NPPT STS N+ D G DSFA S+E  SASNP RSV  ATVQKQ SSAH           GAYGGYGGGDEN
Subjt:  MEKNQKRKGFMRRLYRAAKSAGKAKVKQSNPPTASTSLNNNDGGGDSFALSNEMRSASNPKRSV--ATVQKQTSSAHGGFRDGIGEMRGAYGGYGGGDEN

Query:  VDVKAATYILLVRERLKMERSMDRKVYSAN
        VDVKAATYILLV+ERLKMERSMDR+V+  N
Subjt:  VDVKAATYILLVRERLKMERSMDRKVYSAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAACCAGAAGCGAAAAGGCTTCATGAGGCGATTATATCGAGCCGCAAAATCCGCCGGCAAGGCTAAAGTGAAGCAAAGCAACCCGCCGACGGCGTCTACATC
GCTGAATAATAACGACGGCGGCGGCGACTCTTTTGCGTTGTCGAACGAGATGAGATCTGCAAGTAATCCGAAAAGATCGGTGGCGACGGTGCAGAAGCAGACCTCGTCGG
CGCACGGCGGATTTCGCGACGGAATCGGTGAAATGCGGGGAGCGTACGGTGGTTATGGTGGCGGCGACGAGAATGTTGACGTAAAGGCGGCGACGTACATTTTGTTGGTA
AGAGAGCGTTTGAAGATGGAGAGGTCCATGGATCGAAAAGTGTACTCAGCAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAAACCAGAAGCGAAAAGGCTTCATGAGGCGATTATATCGAGCCGCAAAATCCGCCGGCAAGGCTAAAGTGAAGCAAAGCAACCCGCCGACGGCGTCTACATC
GCTGAATAATAACGACGGCGGCGGCGACTCTTTTGCGTTGTCGAACGAGATGAGATCTGCAAGTAATCCGAAAAGATCGGTGGCGACGGTGCAGAAGCAGACCTCGTCGG
CGCACGGCGGATTTCGCGACGGAATCGGTGAAATGCGGGGAGCGTACGGTGGTTATGGTGGCGGCGACGAGAATGTTGACGTAAAGGCGGCGACGTACATTTTGTTGGTA
AGAGAGCGTTTGAAGATGGAGAGGTCCATGGATCGAAAAGTGTACTCAGCAAATTGA
Protein sequenceShow/hide protein sequence
MEKNQKRKGFMRRLYRAAKSAGKAKVKQSNPPTASTSLNNNDGGGDSFALSNEMRSASNPKRSVATVQKQTSSAHGGFRDGIGEMRGAYGGYGGGDENVDVKAATYILLV
RERLKMERSMDRKVYSAN