; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G017390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G017390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:26038450..26039483
RNA-Seq ExpressionLsi09G017390
SyntenyLsi09G017390
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576125.1 hypothetical protein SDJN03_26764, partial [Cucurbita argyrosperma subsp. sororia]1.3e-8386.49Show/hide
Query:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP
        GSKLFR+YVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP+LYT+RRIFVI+DWMKDVWLNKTLPANAP
Subjt:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP

Query:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD
        I             DIAWFWFGRTLAVANFAYFCINLFGFL+PRF+PRAF+RYFKDRDDETHAK QED LSSA  KSHPSDKK+D
Subjt:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD

KAG7014643.1 hypothetical protein SDJN02_24822, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-8486.1Show/hide
Query:  MDGSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPAN
        ++GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP+LYT+RRIFVI+DWMKDVWLNKTLPAN
Subjt:  MDGSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPAN

Query:  APIKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD
        API             DIAWFWFGRTLAVANFAYFCINLFGFL+PRF+PRAF+RYFKDRDDETHAK QED LSSA  KSHPSDKK+D
Subjt:  APIKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD

XP_022954375.1 uncharacterized protein LOC111456631 [Cucurbita moschata]4.4e-8487.03Show/hide
Query:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP
        GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP+LYT+RRIFVI+DWMKDVWLNKTLPANAP
Subjt:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP

Query:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD
        I             DIAWFWFGRTLAVANFAYFCINLFGFL+PRF+PRAF+RYFKDRDDETHAK QED LSSA  KSHPSDKK+D
Subjt:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD

XP_023550142.1 uncharacterized protein LOC111808420 [Cucurbita pepo subsp. pepo]2.0e-8487.57Show/hide
Query:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP
        GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP+LYT+RRIFVI+DWMKDVWLNKTLPANAP
Subjt:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP

Query:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD
        I             DIAWFWFGRTLAVANFAYFCINLFGFL+PRF+PRAFERYFKDRDDETHAK QED LSSA  KSHPSDKK+D
Subjt:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD

XP_038875679.1 uncharacterized protein LOC120068074 [Benincasa hispida]1.1e-8287.03Show/hide
Query:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP
        GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYT RRIFVI+DWMKDVWLNKTLPANA 
Subjt:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP

Query:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD
         K            DIAWFWFGRTLAVANFAYFC+N++GFLVP FLPRAFERYFKDRDDETHAK  EDKLS+AAAKS PSDKKSD
Subjt:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD

TrEMBL top hitse value%identityAlignment
A0A0A0KAF1 Uncharacterized protein9.9e-8286.49Show/hide
Query:  SKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAPI
        S LFRMYVVVGTTIGLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYT+RRIFVI+DWMKDVWLNK+LPANAPI
Subjt:  SKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAPI

Query:  KVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSS-AAAKSHPSDKKSD
        K            DI WFWFGRTLAVANFAYFCINLFGFL+PRFLPRAFE+YFK+RDDE+HAKF EDKLSS AAAKS PSDKKSD
Subjt:  KVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSS-AAAKSHPSDKKSD

A0A1S3CB68 uncharacterized protein LOC1034988619.9e-8285.56Show/hide
Query:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP
        GS LFRMYVVVGTT+GLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYT+RRIFVI+DW KDVWLNK LPANAP
Subjt:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP

Query:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSS--AAAKSHPSDKKSD
        IK            DI WFWFGRTLAVANFAYFCINLFGFL+PRFLPRAFE+YFK+R DETHAKFQEDKLSS  AAAKS PSDKKSD
Subjt:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSS--AAAKSHPSDKKSD

A0A5D3DMD1 Uncharacterized protein9.9e-8285.56Show/hide
Query:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP
        GS LFRMYVVVGTT+GLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYT+RRIFVI+DW KDVWLNK LPANAP
Subjt:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP

Query:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSS--AAAKSHPSDKKSD
        IK            DI WFWFGRTLAVANFAYFCINLFGFL+PRFLPRAFE+YFK+R DETHAKFQEDKLSS  AAAKS PSDKKSD
Subjt:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSS--AAAKSHPSDKKSD

A0A6J1GS90 uncharacterized protein LOC1114566312.1e-8487.03Show/hide
Query:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP
        GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP+LYT+RRIFVI+DWMKDVWLNKTLPANAP
Subjt:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP

Query:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD
        I             DIAWFWFGRTLAVANFAYFCINLFGFL+PRF+PRAF+RYFKDRDDETHAK QED LSSA  KSHPSDKK+D
Subjt:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD

A0A6J1JUQ0 uncharacterized protein LOC1114880275.8e-8286.02Show/hide
Query:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP
        GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP+LYT+RRIFVI+DWMKDVWLNKTL ANAP
Subjt:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP

Query:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRD-DETHAKFQEDKLSSAAAKSHPSDKKSD
        I             DIAWFWFGRTLAVANFAYFCINLFGFL+PRF+PRAFERYFKDRD DETHAK +ED LSSA  KSHPSDKK+D
Subjt:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRD-DETHAKFQEDKLSSAAAKSHPSDKKSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27990.1 unknown protein2.7e-6369.19Show/hide
Query:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP
        GSKLFR+YV+ GTTIGLFLPLAYVLGGFAR D+HAVRSATPHLFLLS QILTENVISGLSLFSPPVRALVPLLYT+ RIFVI+ W KDVW NK+LP NA 
Subjt:  GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP

Query:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD
          V            + WFWFGR LA+AN  YF +NL  FL+PRFLPRAFE+YF++R DE  AK QEDK      +S PS+ KSD
Subjt:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD

AT5G23920.1 unknown protein2.4e-1937.27Show/hide
Query:  SKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLS-LFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP
        +KLF+ Y +    IGL  PL Y+  G  R D H   +A PHLFLLS Q  TE +  G S  +S P+  L P+ Y  RRIF ++DW+K  + +   P   P
Subjt:  SKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLS-LFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAP

Query:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFK--DRDD
        +++                + GR +A  N   +  NLFG L+P FLPR+ E YF   ++DD
Subjt:  IKVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFK--DRDD

AT5G52420.1 unknown protein1.3e-2234.59Show/hide
Query:  SKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAPI
        +K+FR+YV     +GL +P+ Y+  G    D++ V +A PH+FLL+ QI  E + +    FS P R LVP++Y  RR+  +V+W+   +  + +      
Subjt:  SKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAPI

Query:  KVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYF-KDRDD
        + RM              + G+ LA AN   +  NLFG L+P +LPRAF+RY+  D++D
Subjt:  KVRMREQHENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYF-KDRDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGCAGCAAGTTGTTTAGAATGTATGTGGTGGTGGGAACGACGATAGGGTTGTTCTTGCCATTGGCATATGTGTTGGGTGGGTTTGCGAGAAGCGACGAGCATGC
GGTTCGGTCAGCGACACCGCATTTGTTCTTGTTGTCATTTCAGATTTTAACAGAGAATGTGATAAGCGGATTGTCGTTGTTCTCGCCACCGGTGAGAGCGTTGGTGCCGC
TACTTTACACAATAAGGAGGATCTTCGTCATTGTGGATTGGATGAAAGATGTTTGGCTTAACAAAACCTTGCCGGCAAATGCACCGATCAAGGTACGAATGAGGGAACAA
CATGAAAATAAGGTAACGGACATAGCATGGTTTTGGTTCGGAAGGACATTAGCAGTGGCTAATTTTGCATATTTCTGCATAAATCTATTTGGATTTTTAGTCCCAAGATT
CCTTCCAAGGGCATTCGAAAGGTATTTTAAGGACAGAGATGATGAAACACATGCCAAATTTCAGGAAGATAAGCTCTCTTCCGCCGCCGCTAAATCTCACCCCTCCGATA
AGAAGTCCGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGCAGCAAGTTGTTTAGAATGTATGTGGTGGTGGGAACGACGATAGGGTTGTTCTTGCCATTGGCATATGTGTTGGGTGGGTTTGCGAGAAGCGACGAGCATGC
GGTTCGGTCAGCGACACCGCATTTGTTCTTGTTGTCATTTCAGATTTTAACAGAGAATGTGATAAGCGGATTGTCGTTGTTCTCGCCACCGGTGAGAGCGTTGGTGCCGC
TACTTTACACAATAAGGAGGATCTTCGTCATTGTGGATTGGATGAAAGATGTTTGGCTTAACAAAACCTTGCCGGCAAATGCACCGATCAAGGTACGAATGAGGGAACAA
CATGAAAATAAGGTAACGGACATAGCATGGTTTTGGTTCGGAAGGACATTAGCAGTGGCTAATTTTGCATATTTCTGCATAAATCTATTTGGATTTTTAGTCCCAAGATT
CCTTCCAAGGGCATTCGAAAGGTATTTTAAGGACAGAGATGATGAAACACATGCCAAATTTCAGGAAGATAAGCTCTCTTCCGCCGCCGCTAAATCTCACCCCTCCGATA
AGAAGTCCGACTGA
Protein sequenceShow/hide protein sequence
MDGSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTIRRIFVIVDWMKDVWLNKTLPANAPIKVRMREQ
HENKVTDIAWFWFGRTLAVANFAYFCINLFGFLVPRFLPRAFERYFKDRDDETHAKFQEDKLSSAAAKSHPSDKKSD