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Lsi09G017420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G017420
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF4408 domain-containing protein
Genome locationchr09:26061903..26062301
RNA-Seq ExpressionLsi09G017420
SyntenyLsi09G017420
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant
IPR025520 - Domain of unknown function DUF4408


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV86324.1 DUF4408 domain-containing protein [Cephalotus follicularis]1.6e-1145.07Show/hide
Query:  SFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYY----------------IESTMEMNMNPSENMKQLVEKVVEEKEEEEISSVEGDNSVDVS
        SFF P CLFIVVN IVV+++GE KL G+ SS  +++Y+EY                  E  +EMN+   E+ K +VE    +K++     VEG N V+V 
Subjt:  SFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYY----------------IESTMEMNMNPSENMKQLVEKVVEEKEEEEISSVEGDNSVDVS

Query:  E---KESEGDCE-----LANEELNKRAEAFIARVNKQRKLEA
        E   KE E D E     + +EELNKR E FIARVNKQR LEA
Subjt:  E---KESEGDCE-----LANEELNKRAEAFIARVNKQRKLEA

KAA0039829.1 DUF4408 domain-containing protein [Cucumis melo var. makuwa]4.1e-4476.34Show/hide
Query:  MIKMVVTPPSFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMN--MNPSENMKQLVEKVVEEKEEEEISSVEGDNSVDVSEKESE
        +IK+V+TPPSFF+PSCLF++VNFIVVYI+GEQKL  AKS+SMN MYDEYYIE TMEM   +NP ENMKQLVEK VEEKEEE I S++ DN VD  +KE+E
Subjt:  MIKMVVTPPSFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMN--MNPSENMKQLVEKVVEEKEEEEISSVEGDNSVDVSEKESE

Query:  GDCELANEELNKRAEAFIARVNKQRKLEALD
        GDC+ ANEELNKRAEAFIARVNKQRKLEA+D
Subjt:  GDCELANEELNKRAEAFIARVNKQRKLEALD

KAE8646757.1 hypothetical protein Csa_004884 [Cucumis sativus]1.6e-4376.52Show/hide
Query:  MIKMVVTPPSFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMN-MNPSENMKQL-VEKVVEEKEEEEISSVEGDNSVDVSEKESE
        +IKMV TPPSFF+PSCLF++VNFIVVYI+GEQKL GAKS+ MN MYDEYYIE T+EM  +NP ENMK+L VEK VEEKEEE IS +E DN +  SEKE+E
Subjt:  MIKMVVTPPSFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMN-MNPSENMKQL-VEKVVEEKEEEEISSVEGDNSVDVSEKESE

Query:  GDCELANEELNKRAEAFIARVNKQRKLEALDY
        GDC+LANEELNKRAEAFIARVNKQRKLEA+D+
Subjt:  GDCELANEELNKRAEAFIARVNKQRKLEALDY

XP_007221609.1 zinc finger E-box-binding homeobox 1 [Prunus persica]2.1e-1138.85Show/hide
Query:  FFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMNMNPS-------------------ENMKQLVEKVVEE----------------
        FF P CLFIVVNFIVV+++GE +L+G +SS  N+MY+E Y+E T  +    S                   +N K L EK V+E                
Subjt:  FFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMNMNPS-------------------ENMKQLVEKVVEE----------------

Query:  -----KEEEEISSVEGDNSVDVSEKESEGDCELANEELNKRAEAFIARVNKQRKLEA
             +EE+E    + +  ++  +KE E    +  EELNKR EAFIARVNKQR LEA
Subjt:  -----KEEEEISSVEGDNSVDVSEKESEGDCELANEELNKRAEAFIARVNKQRKLEA

XP_038875115.1 uncharacterized protein LOC120067646 [Benincasa hispida]3.4e-4682.96Show/hide
Query:  MIKMVVTPPSFFTPSCLFIVVNFIVVYILGEQKLAGAKSSS-MNKMYDEYYIESTMEMNMNPSENMKQLVEKVVEEKEEEEISSVEGDN-SVDVSEK-ES
        MI MVV PPSFF+PSC F++VNFIV+YI+GEQKLAGA+SSS MNKMYDEYYI  TMEMNMN  ENMKQLVEKVVEEKEEEE+  VEGDN  VDVSEK E+
Subjt:  MIKMVVTPPSFFTPSCLFIVVNFIVVYILGEQKLAGAKSSS-MNKMYDEYYIESTMEMNMNPSENMKQLVEKVVEEKEEEEISSVEGDN-SVDVSEK-ES

Query:  EGDCELANEELNKRAEAFIARVNKQRKLEALDYCL
        EGDCELANEELNKRAEAFIARVNKQRKLEA+D CL
Subjt:  EGDCELANEELNKRAEAFIARVNKQRKLEALDYCL

TrEMBL top hitse value%identityAlignment
A0A0A0K9L0 DUF4408 domain-containing protein1.7e-4377.1Show/hide
Query:  MIKMVVTPPSFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMN-MNPSENMKQL-VEKVVEEKEEEEISSVEGDNSVDVSEKESE
        +IKMV TPPSFF+PSCLF++VNFIVVYI+GEQKL GAKS+ MN MYDEYYIE T+EM  +NP ENMK+L VEK VEEKEEE IS +E DN +  SEKE+E
Subjt:  MIKMVVTPPSFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMN-MNPSENMKQL-VEKVVEEKEEEEISSVEGDNSVDVSEKESE

Query:  GDCELANEELNKRAEAFIARVNKQRKLEALD
        GDC+LANEELNKRAEAFIARVNKQRKLEA+D
Subjt:  GDCELANEELNKRAEAFIARVNKQRKLEALD

A0A1Q3D1K6 DUF4408 domain-containing protein7.6e-1245.07Show/hide
Query:  SFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYY----------------IESTMEMNMNPSENMKQLVEKVVEEKEEEEISSVEGDNSVDVS
        SFF P CLFIVVN IVV+++GE KL G+ SS  +++Y+EY                  E  +EMN+   E+ K +VE    +K++     VEG N V+V 
Subjt:  SFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYY----------------IESTMEMNMNPSENMKQLVEKVVEEKEEEEISSVEGDNSVDVS

Query:  E---KESEGDCE-----LANEELNKRAEAFIARVNKQRKLEA
        E   KE E D E     + +EELNKR E FIARVNKQR LEA
Subjt:  E---KESEGDCE-----LANEELNKRAEAFIARVNKQRKLEA

A0A5D3DN17 DUF4408 domain-containing protein2.0e-4476.34Show/hide
Query:  MIKMVVTPPSFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMN--MNPSENMKQLVEKVVEEKEEEEISSVEGDNSVDVSEKESE
        +IK+V+TPPSFF+PSCLF++VNFIVVYI+GEQKL  AKS+SMN MYDEYYIE TMEM   +NP ENMKQLVEK VEEKEEE I S++ DN VD  +KE+E
Subjt:  MIKMVVTPPSFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMN--MNPSENMKQLVEKVVEEKEEEEISSVEGDNSVDVSEKESE

Query:  GDCELANEELNKRAEAFIARVNKQRKLEALD
        GDC+ ANEELNKRAEAFIARVNKQRKLEA+D
Subjt:  GDCELANEELNKRAEAFIARVNKQRKLEALD

A0A5E4EWE0 PREDICTED: L484_0101332.2e-1139.26Show/hide
Query:  FFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMNMNPS-------------------ENMKQLVEKVV------------------
        FF P CLFIVVNFIVV+++GE +L+G +SS  N+MY+E Y+E T  +    S                   +N K L EK V                  
Subjt:  FFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMNMNPS-------------------ENMKQLVEKVV------------------

Query:  -----EEKEEEEI----SSVEGDNSVDVSEKESEGDCELANEELNKRAEAFIARVNKQRKLEA
             EE++EEEI      +E +   +  E+E E    +  EELNKR EAFIARVNKQR LEA
Subjt:  -----EEKEEEEI----SSVEGDNSVDVSEKESEGDCELANEELNKRAEAFIARVNKQRKLEA

M5XMS0 DUF4408 domain-containing protein1.0e-1138.85Show/hide
Query:  FFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMNMNPS-------------------ENMKQLVEKVVEE----------------
        FF P CLFIVVNFIVV+++GE +L+G +SS  N+MY+E Y+E T  +    S                   +N K L EK V+E                
Subjt:  FFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMNMNPS-------------------ENMKQLVEKVVEE----------------

Query:  -----KEEEEISSVEGDNSVDVSEKESEGDCELANEELNKRAEAFIARVNKQRKLEA
             +EE+E    + +  ++  +KE E    +  EELNKR EAFIARVNKQR LEA
Subjt:  -----KEEEEISSVEGDNSVDVSEKESEGDCELANEELNKRAEAFIARVNKQRKLEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAAATGGTCGTTACGCCACCCTCGTTCTTCACCCCGAGTTGCTTGTTCATTGTCGTTAATTTCATTGTCGTCTACATCCTCGGGGAACAAAAGCTTGCCGGTGC
AAAATCGTCTTCGATGAACAAAATGTATGATGAATACTACATTGAGAGTACTATGGAGATGAACATGAATCCTAGTGAAAATATGAAACAATTGGTTGAGAAAGTGGTGG
AAGAAAAAGAAGAGGAAGAGATCAGCTCCGTCGAGGGCGACAACAGTGTCGATGTGAGTGAAAAAGAGAGCGAAGGCGATTGCGAGTTGGCCAATGAAGAGTTGAACAAA
AGAGCAGAAGCCTTCATTGCAAGAGTTAACAAGCAAAGGAAGCTTGAAGCTTTGGATTATTGTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCAAAATGGTCGTTACGCCACCCTCGTTCTTCACCCCGAGTTGCTTGTTCATTGTCGTTAATTTCATTGTCGTCTACATCCTCGGGGAACAAAAGCTTGCCGGTGC
AAAATCGTCTTCGATGAACAAAATGTATGATGAATACTACATTGAGAGTACTATGGAGATGAACATGAATCCTAGTGAAAATATGAAACAATTGGTTGAGAAAGTGGTGG
AAGAAAAAGAAGAGGAAGAGATCAGCTCCGTCGAGGGCGACAACAGTGTCGATGTGAGTGAAAAAGAGAGCGAAGGCGATTGCGAGTTGGCCAATGAAGAGTTGAACAAA
AGAGCAGAAGCCTTCATTGCAAGAGTTAACAAGCAAAGGAAGCTTGAAGCTTTGGATTATTGTTTGTAG
Protein sequenceShow/hide protein sequence
MIKMVVTPPSFFTPSCLFIVVNFIVVYILGEQKLAGAKSSSMNKMYDEYYIESTMEMNMNPSENMKQLVEKVVEEKEEEEISSVEGDNSVDVSEKESEGDCELANEELNK
RAEAFIARVNKQRKLEALDYCL