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Lsi09G017620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G017620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTify domain-containing protein
Genome locationchr09:26350855..26353267
RNA-Seq ExpressionLsi09G017620
SyntenyLsi09G017620
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR010399 - Tify domain
IPR018467 - CO/COL/TOC1, conserved site
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039849.1 protein TIFY 9 [Cucumis melo var. makuwa]7.4e-3658.24Show/hide
Query:  MARATVELDFFGLEKEASS----------------------------------------------------------------KPTTPESLQHTSPMTIF
        MARATVELDFFGLEKEASS                                                                KPT  E LQHTS MTIF
Subjt:  MARATVELDFFGLEKEASS----------------------------------------------------------------KPTTPESLQHTSPMTIF

Query:  YNGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        YNGTVAVFDVPRDKAE+ILKLVAEGKAEANPTVAIPSTDHQQQLL SL+GDLPIARKKSLQRFLEKRKER
Subjt:  YNGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

XP_008459903.1 PREDICTED: protein TIFY 9 [Cucumis melo]7.4e-3658.24Show/hide
Query:  MARATVELDFFGLEKEASS----------------------------------------------------------------KPTTPESLQHTSPMTIF
        MARATVELDFFGLEKEASS                                                                KPT  E LQHTS MTIF
Subjt:  MARATVELDFFGLEKEASS----------------------------------------------------------------KPTTPESLQHTSPMTIF

Query:  YNGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        YNGTVAVFDVPRDKAE+ILKLVAEGKAEANPTVAIPSTDHQQQLL SL+GDLPIARKKSLQRFLEKRKER
Subjt:  YNGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

XP_022953183.1 protein TIFY 9-like isoform X2 [Cucurbita moschata]3.3e-3659.88Show/hide
Query:  MARATVELDFFGLEKEASSK---------------------------------------PTTP----------------------ESLQHTSPMTIFYNG
        MARATVELDFFGLEK+ASS+                                       P TP                      ESLQHTSPMTIFYNG
Subjt:  MARATVELDFFGLEKEASSK---------------------------------------PTTP----------------------ESLQHTSPMTIFYNG

Query:  TVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        TVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTD QQQLL SL+GDLPIARKKSLQRFLEKRKER
Subjt:  TVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

XP_031742393.1 protein TIFY 9 [Cucumis sativus]7.4e-3657.99Show/hide
Query:  MARATVELDFFGLEKEASSK---------------------------------------------------------------PTTPESLQHTSPMTIFY
        MARATVELDFFGLEKEASSK                                                               PT  ESLQHTS MTIFY
Subjt:  MARATVELDFFGLEKEASSK---------------------------------------------------------------PTTPESLQHTSPMTIFY

Query:  NGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        NGTVAVFDVPRDKAE+ILKLVAEGKAE NPTVAIPSTDHQQ LL SL+GDLPIARKKSLQRFLEKRKER
Subjt:  NGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

XP_038906955.1 protein TIFY 9 [Benincasa hispida]5.1e-3758.93Show/hide
Query:  MARATVELDFFGLEKEASSK--------------------------------------------------------------PTTPESLQHTSPMTIFYN
        MARATVELDFFGLEK+ SSK                                                              PT+ ESLQHTSPMTIFYN
Subjt:  MARATVELDFFGLEKEASSK--------------------------------------------------------------PTTPESLQHTSPMTIFYN

Query:  GTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        GTVAVFDVPRDKAE+ILKLVAEGKAEANPTVA PSTDHQQQLL SLNGDLPIARKKSLQRFLEKRKER
Subjt:  GTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

TrEMBL top hitse value%identityAlignment
A0A0A0K9H7 Tify domain-containing protein3.6e-3657.99Show/hide
Query:  MARATVELDFFGLEKEASSK---------------------------------------------------------------PTTPESLQHTSPMTIFY
        MARATVELDFFGLEKEASSK                                                               PT  ESLQHTS MTIFY
Subjt:  MARATVELDFFGLEKEASSK---------------------------------------------------------------PTTPESLQHTSPMTIFY

Query:  NGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        NGTVAVFDVPRDKAE+ILKLVAEGKAE NPTVAIPSTDHQQ LL SL+GDLPIARKKSLQRFLEKRKER
Subjt:  NGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

A0A1S3CAS3 protein TIFY 93.6e-3658.24Show/hide
Query:  MARATVELDFFGLEKEASS----------------------------------------------------------------KPTTPESLQHTSPMTIF
        MARATVELDFFGLEKEASS                                                                KPT  E LQHTS MTIF
Subjt:  MARATVELDFFGLEKEASS----------------------------------------------------------------KPTTPESLQHTSPMTIF

Query:  YNGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        YNGTVAVFDVPRDKAE+ILKLVAEGKAEANPTVAIPSTDHQQQLL SL+GDLPIARKKSLQRFLEKRKER
Subjt:  YNGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

A0A5A7TF20 Protein TIFY 93.6e-3658.24Show/hide
Query:  MARATVELDFFGLEKEASS----------------------------------------------------------------KPTTPESLQHTSPMTIF
        MARATVELDFFGLEKEASS                                                                KPT  E LQHTS MTIF
Subjt:  MARATVELDFFGLEKEASS----------------------------------------------------------------KPTTPESLQHTSPMTIF

Query:  YNGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        YNGTVAVFDVPRDKAE+ILKLVAEGKAEANPTVAIPSTDHQQQLL SL+GDLPIARKKSLQRFLEKRKER
Subjt:  YNGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

A0A6J1GMQ1 protein TIFY 9-like isoform X21.6e-3659.88Show/hide
Query:  MARATVELDFFGLEKEASSK---------------------------------------PTTP----------------------ESLQHTSPMTIFYNG
        MARATVELDFFGLEK+ASS+                                       P TP                      ESLQHTSPMTIFYNG
Subjt:  MARATVELDFFGLEKEASSK---------------------------------------PTTP----------------------ESLQHTSPMTIFYNG

Query:  TVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        TVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTD QQQLL SL+GDLPIARKKSLQRFLEKRKER
Subjt:  TVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

A0A6J1JVY1 protein TIFY 9-like isoform X24.7e-3659.28Show/hide
Query:  MARATVELDFFGLEKEASSK---------------------------------------PTTP----------------------ESLQHTSPMTIFYNG
        MARATVELDFFGLEK+ASS+                                       P TP                      ESLQHTSPMTIFYNG
Subjt:  MARATVELDFFGLEKEASSK---------------------------------------PTTP----------------------ESLQHTSPMTIFYNG

Query:  TVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        TVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTD QQ+LL SL+GDLPIARKKSLQRFLEKRKER
Subjt:  TVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

SwissProt top hitse value%identityAlignment
A2XD79 Protein TIFY 11c7.5e-0740.19Show/hide
Query:  RATVELDFFGLEKEASSKPTTPESLQHT--SPMTIFYNGTVAVF-DVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRF
        R T+EL      ++A +   T E  + T  + +TIFY G+V VF D P +KA  ++KL     + A   V+       Q  L     D+PIARK SLQRF
Subjt:  RATVELDFFGLEKEASSKPTTPESLQHT--SPMTIFYNGTVAVF-DVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRF

Query:  LEKRKER
        LEKRK R
Subjt:  LEKRKER

A2XSX6 Protein TIFY 98.0e-0943.18Show/hide
Query:  PESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLV-----AEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        P +    +PMT+FYNG+VAVFDV  DKAE+I+++      A+G A  N  V   + +             P+ R KSLQRFL KRKER
Subjt:  PESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLV-----AEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

Q7XV97 Protein TIFY 98.0e-0943.18Show/hide
Query:  PESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLV-----AEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        P +    +PMT+FYNG+VAVFDV  DKAE+I+++      A+G A  N  V   + +             P+ R KSLQRFL KRKER
Subjt:  PESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLV-----AEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

Q8GRS2 Protein TIFY 11c7.5e-0740.19Show/hide
Query:  RATVELDFFGLEKEASSKPTTPESLQHT--SPMTIFYNGTVAVF-DVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRF
        R T+EL      ++A +   T E  + T  + +TIFY G+V VF D P +KA  ++KL     + A   V+       Q  L     D+PIARK SLQRF
Subjt:  RATVELDFFGLEKEASSKPTTPESLQHT--SPMTIFYNGTVAVF-DVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRF

Query:  LEKRKER
        LEKRK R
Subjt:  LEKRKER

Q93ZM9 Protein TIFY 91.7e-1448.45Show/hide
Query:  ASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKA-------EANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        AS   ++ E +  T PMTIFYNG+V+VF V R+KA  I+K+  E  +       E + +V +P+T   +   ++L GDLPIAR+KSLQRFLEKRKER
Subjt:  ASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKA-------EANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

Arabidopsis top hitse value%identityAlignment
AT3G43440.1 jasmonate-zim-domain protein 111.2e-0738.2Show/hide
Query:  SKPTTPESLQHTSPMTIFYNGTVAVFD-VPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        ++ T P++   ++ +TI + G+  VF+ VP  K + I+++   GK   N T   P+ +  + L  S   DLPIAR++SLQRFLEKR++R
Subjt:  SKPTTPESLQHTSPMTIFYNGTVAVFD-VPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

AT5G13220.1 jasmonate-zim-domain protein 101.2e-1548.45Show/hide
Query:  ASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKA-------EANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        AS   ++ E +  T PMTIFYNG+V+VF V R+KA  I+K+  E  +       E + +V +P+T   +   ++L GDLPIAR+KSLQRFLEKRKER
Subjt:  ASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKA-------EANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

AT5G13220.2 jasmonate-zim-domain protein 101.2e-1548.45Show/hide
Query:  ASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKA-------EANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        AS   ++ E +  T PMTIFYNG+V+VF V R+KA  I+K+  E  +       E + +V +P+T   +   ++L GDLPIAR+KSLQRFLEKRKER
Subjt:  ASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKA-------EANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

AT5G13220.3 jasmonate-zim-domain protein 101.2e-1548.45Show/hide
Query:  ASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKA-------EANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER
        AS   ++ E +  T PMTIFYNG+V+VF V R+KA  I+K+  E  +       E + +V +P+T   +   ++L GDLPIAR+KSLQRFLEKRKER
Subjt:  ASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKA-------EANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

AT5G20900.1 jasmonate-zim-domain protein 127.7e-0732.46Show/hide
Query:  SSKPTTPESLQHTSPMTIFYNGTVAVFD-VPRDKAESILKLVAEGKAEANPT----VAIPSTDHQQQLLESLN--------------------GDLPIAR
        +++PT P      + +TIF+ G+V VFD +P +K + IL++ A+     N T    V+ P+ +       + N                     DLPIAR
Subjt:  SSKPTTPESLQHTSPMTIFYNGTVAVFD-VPRDKAESILKLVAEGKAEANPT----VAIPSTDHQQQLLESLN--------------------GDLPIAR

Query:  KKSLQRFLEKRKER
        + SLQRFLEKR++R
Subjt:  KKSLQRFLEKRKER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGGGCTACAGTCGAGCTTGATTTCTTCGGCCTTGAGAAGGAGGCTTCCTCCAAGCCGACTACTCCTGAATCGCTTCAACATACATCTCCGATGACTATCTTCTA
CAACGGAACCGTCGCCGTTTTTGACGTTCCTCGTGATAAGGCTGAGAGCATTCTGAAACTTGTTGCGGAAGGAAAAGCTGAAGCGAATCCTACGGTTGCAATTCCATCCA
CCGACCACCAGCAACAGTTGCTTGAATCTCTTAACGGAGATCTTCCAATTGCAAGGAAGAAATCGCTTCAAAGATTCTTGGAGAAGCGTAAGGAGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGGGCTACAGTCGAGCTTGATTTCTTCGGCCTTGAGAAGGAGGCTTCCTCCAAGCCGACTACTCCTGAATCGCTTCAACATACATCTCCGATGACTATCTTCTA
CAACGGAACCGTCGCCGTTTTTGACGTTCCTCGTGATAAGGCTGAGAGCATTCTGAAACTTGTTGCGGAAGGAAAAGCTGAAGCGAATCCTACGGTTGCAATTCCATCCA
CCGACCACCAGCAACAGTTGCTTGAATCTCTTAACGGAGATCTTCCAATTGCAAGGAAGAAATCGCTTCAAAGATTCTTGGAGAAGCGTAAGGAGAGGTAACGATTCATA
TTCCCTGAAATTTAAATTCATATTCCAATTTATTTATTTATCCGTTTTTTTTTGTACCTTTGAAATTTCGAAAAGCTTTTCCGTTTGTGTATTCTTATTCTTTGGTAGCT
TAGGCCGCTATATTGAAAATGACGATGGCCGATGGGTGGATGCTTTCGATTTGAAATAATTATAAAATTTTCTCTCCAAAAAATAATAATAATAATAATAATAGTAAAAG
AAAAGAAAAAGGATTGTTGTTATTGTATTGATTTGCGCCTATATTTGTGCAACTATCCCATGGTTGAAACTTTCTTTTATTTTTCTTGAGCAATATTTTTTACCTTTTTA
GTGGGATTTACCAAGGATTGTCTCATAGGGAAATTCCATTCATGACTTTTGAGTGAATAATGACATAAAATTCATTAAAATTTGAAGATTGAATTTTGACATTTCAACAG
GTTAGACTTAGTTTGGTTGGCAATTAAATTTTTAAAATTAAAATATGTATTATAAATTATAAATTATATAATATTACAAAAAATATATAATTTTTTATCATAAAATATGA
TTTATAAATATAGTATAAAACACATTTTAAATAATTGTTTAACTTGAAATTCAATTTCTGAATTTACTATCAAATACATATATAAAAATATAAAATATAACTGTGTTTTC
ATTAAATCCCTCGTACCAAACCGGCCTTTAATGTCTTCTCATTTTGTTCTTTTTTTTCTTCTTTCTATTCCTGACAACAAGTAATTTATAGTTTTTTAATATCCAATTTA
TCCTAAAGATGTTCTTATAGTTAGTTTATGATTTGACTTCTTCCGAAAAAAAAAGTTTCCACGGCTTAAAGAAGAATAACATTGTATGGAGATGGAAATTATTATATTAT
TATTTTATCAAAAATTAACTTCTAAACGACAAGAAGTAAATTTATGCATTGAAAATTAGGGGACCAATAAGAAACATTGTATTTTACTTTATTTTTTAATTTATAAAAAT
TTAATATTGAATTAAAACCCTACTTTTTATAGAAAATATTAAAATGTTGAAATAATACTGAAATAAGGTGTATGTATTATGGAAGAAGATAATGTGGAGGATAGAAAAAA
TAAATAGTGGCAAAAGTTAGGCGTGTTTGTAATATTCTTATTTTTATTTATCATTTTTTCAGTTTTCTTTTCTTTAAATTGATACAATATTTTCCTTTTGAAAATTGAAA
ATTCAGTTAAGCATTTAAAAAACGTTTGGAAATAAAGTAATTTAAGAGAAGAAATAAATAGTCACAAGAGAAGTTCAAATTTTGAAAAGAATAGAAAAGACTTTCTAGGC
GAGTGGGTGGGTCGGTGGAGTTTAGGAGGGTCAGGAAAGAAAGCTTCCCCTTTTTAACATGCG
Protein sequenceShow/hide protein sequence
MARATVELDFFGLEKEASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER