; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G017630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G017630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein LAX PANICLE 2-like
Genome locationchr09:26382311..26382958
RNA-Seq ExpressionLsi09G017630
SyntenyLsi09G017630
Gene Ontology termsGO:0007275 - multicellular organism development (biological process)
InterPro domainsIPR044171 - Protein LAX PANICLE 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039850.1 uncharacterized protein E6C27_scaffold122G001250 [Cucumis melo var. makuwa]2.3e-8983.03Show/hide
Query:  MSHFEGFH-NNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAA-ADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLL
        MSHFEGFH NNNTNNNSH H H   HLFPLQD  +TTTNQN STSKDLTLHDSAA ADKGWLRLS+GA TPDVVV+H  HHHHH Q PGFR GLTELDLL
Subjt:  MSHFEGFH-NNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAA-ADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLL

Query:  PSDSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPP-ELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAATAAAAGSSSDTVRVIDPP
        PSD    G   + ESSLGVVG+FS +PALVLPP PP ELNWTFRPISS+NSSSSNCSSSFIPFGPYFS PFQ HPGLDLVAATAAAAGSSSD VRVIDPP
Subjt:  PSDSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPP-ELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAATAAAAGSSSDTVRVIDPP

Query:  RRPHSGIWFSLQPLELNQ
        RRPHSGIWFSLQPLELNQ
Subjt:  RRPHSGIWFSLQPLELNQ

XP_004140650.1 protein LAX PANICLE 2 [Cucumis sativus]2.1e-8581.19Show/hide
Query:  MSHFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSA-AADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLP
        MSHFEGFHNNN N+     HHH  HLFPLQD   +TTNQN STSKDLTLHDSA  ADK WLRLSIGA TPDVVV HN HHHHH Q PGFRFGLTE+DLLP
Subjt:  MSHFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSA-AADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLP

Query:  SDSGVVGSKLNAESSLGVVGDFSTTPALVL-PPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAAT-AAAAGSSSDTVRVIDPP
        SD    G   + ESSLGVVG+FS TPALVL PP PPELNWTFRPISS+NSSSSNCSSSFIPFGPYFS PFQ HPGLDLVAAT AAAAGSSSD VRVIDPP
Subjt:  SDSGVVGSKLNAESSLGVVGDFSTTPALVL-PPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAAT-AAAAGSSSDTVRVIDPP

Query:  RRPHSGIWFSLQPLELNQ
        RRPHSGIWFSLQPLELNQ
Subjt:  RRPHSGIWFSLQPLELNQ

XP_008459904.1 PREDICTED: uncharacterized protein LOC103498884 [Cucumis melo]3.7e-8781.65Show/hide
Query:  MSHFEGFH-NNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAA-ADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLL
        MSHFEGFH NNNTNNNSH       HLFPLQD  +TTTNQN STSKDLTLHDSAA ADKGWLRLS+GA TPDVVV+H  HHHHH Q PGFR GLTELDLL
Subjt:  MSHFEGFH-NNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAA-ADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLL

Query:  PSDSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPP-ELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAATAAAAGSSSDTVRVIDPP
        PSD    G   + ESSLGVVG+FS +PALVLPP PP ELNWTFRPISS+NSSSSNCSSSFIPFGPYFS PFQ HPGLDLVAATAAAAGSSS  VRVIDPP
Subjt:  PSDSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPP-ELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAATAAAAGSSSDTVRVIDPP

Query:  RRPHSGIWFSLQPLELNQ
        RRPHSGIWFSLQPLELNQ
Subjt:  RRPHSGIWFSLQPLELNQ

XP_022953329.1 protein LAX PANICLE 2-like [Cucurbita moschata]3.1e-6568.81Show/hide
Query:  MSHFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLPS
        M+HF+ FH NN+NNNS DHHHHH HLFPLQ    TTTNQ PS SKD  LHD+   D+GWLRLSIGAATPDVVV     H H  Q PGFRFGLTELDLL S
Subjt:  MSHFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLPS

Query:  DSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAA--TAAAAGSSSD-TVRVIDPP
         +G +GSK +  SS+G      ++P +VL   PPELNWTFRPISS+N SSSNCSSS +P+GPYFS PFQ HPGLDLVAA  TAAAAG SSD  +RVIDPP
Subjt:  DSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAA--TAAAAGSSSD-TVRVIDPP

Query:  RRPHSGIWFSLQPLELNQ
        RRPHSGIWFSLQ  E NQ
Subjt:  RRPHSGIWFSLQPLELNQ

XP_038875677.1 protein LAX PANICLE 2-like [Benincasa hispida]2.3e-8984.72Show/hide
Query:  MSHFEGFH-NNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLP
        MSHFEGFH NNNTNNNSHDHHHH  HLFPLQ DS TTTNQNPSTSKDLTLHD  A DK WLRLSIGAATPDVVV      H+HHQ PGF FGLTELDLLP
Subjt:  MSHFEGFH-NNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLP

Query:  SDSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAATAAAAGSSSDTVRVIDPPRR
        SD G VGSK    SSLGVVGDFSTTPALVLPP PPELNWTFRPISSYNSSSSNCSSSFIPF PYFS PFQ H GLDLV A +AAAGSSSD VRVIDPPRR
Subjt:  SDSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAATAAAAGSSSDTVRVIDPPRR

Query:  PHSGIWFSLQPLELNQ
        PHSGIWFSLQPLELNQ
Subjt:  PHSGIWFSLQPLELNQ

TrEMBL top hitse value%identityAlignment
A0A0A0KC58 Uncharacterized protein1.0e-8581.19Show/hide
Query:  MSHFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSA-AADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLP
        MSHFEGFHNNN N+     HHH  HLFPLQD   +TTNQN STSKDLTLHDSA  ADK WLRLSIGA TPDVVV HN HHHHH Q PGFRFGLTE+DLLP
Subjt:  MSHFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSA-AADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLP

Query:  SDSGVVGSKLNAESSLGVVGDFSTTPALVL-PPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAAT-AAAAGSSSDTVRVIDPP
        SD    G   + ESSLGVVG+FS TPALVL PP PPELNWTFRPISS+NSSSSNCSSSFIPFGPYFS PFQ HPGLDLVAAT AAAAGSSSD VRVIDPP
Subjt:  SDSGVVGSKLNAESSLGVVGDFSTTPALVL-PPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAAT-AAAAGSSSDTVRVIDPP

Query:  RRPHSGIWFSLQPLELNQ
        RRPHSGIWFSLQPLELNQ
Subjt:  RRPHSGIWFSLQPLELNQ

A0A1S3CBC6 uncharacterized protein LOC1034988841.8e-8781.65Show/hide
Query:  MSHFEGFH-NNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAA-ADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLL
        MSHFEGFH NNNTNNNSH       HLFPLQD  +TTTNQN STSKDLTLHDSAA ADKGWLRLS+GA TPDVVV+H  HHHHH Q PGFR GLTELDLL
Subjt:  MSHFEGFH-NNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAA-ADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLL

Query:  PSDSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPP-ELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAATAAAAGSSSDTVRVIDPP
        PSD    G   + ESSLGVVG+FS +PALVLPP PP ELNWTFRPISS+NSSSSNCSSSFIPFGPYFS PFQ HPGLDLVAATAAAAGSSS  VRVIDPP
Subjt:  PSDSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPP-ELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAATAAAAGSSSDTVRVIDPP

Query:  RRPHSGIWFSLQPLELNQ
        RRPHSGIWFSLQPLELNQ
Subjt:  RRPHSGIWFSLQPLELNQ

A0A5D3DMZ8 Uncharacterized protein1.1e-8983.03Show/hide
Query:  MSHFEGFH-NNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAA-ADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLL
        MSHFEGFH NNNTNNNSH H H   HLFPLQD  +TTTNQN STSKDLTLHDSAA ADKGWLRLS+GA TPDVVV+H  HHHHH Q PGFR GLTELDLL
Subjt:  MSHFEGFH-NNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAA-ADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLL

Query:  PSDSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPP-ELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAATAAAAGSSSDTVRVIDPP
        PSD    G   + ESSLGVVG+FS +PALVLPP PP ELNWTFRPISS+NSSSSNCSSSFIPFGPYFS PFQ HPGLDLVAATAAAAGSSSD VRVIDPP
Subjt:  PSDSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPP-ELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAATAAAAGSSSDTVRVIDPP

Query:  RRPHSGIWFSLQPLELNQ
        RRPHSGIWFSLQPLELNQ
Subjt:  RRPHSGIWFSLQPLELNQ

A0A6J1GPC0 protein LAX PANICLE 2-like1.5e-6568.81Show/hide
Query:  MSHFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLPS
        M+HF+ FH NN+NNNS DHHHHH HLFPLQ    TTTNQ PS SKD  LHD+   D+GWLRLSIGAATPDVVV     H H  Q PGFRFGLTELDLL S
Subjt:  MSHFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLPS

Query:  DSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAA--TAAAAGSSSD-TVRVIDPP
         +G +GSK +  SS+G      ++P +VL   PPELNWTFRPISS+N SSSNCSSS +P+GPYFS PFQ HPGLDLVAA  TAAAAG SSD  +RVIDPP
Subjt:  DSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAA--TAAAAGSSSD-TVRVIDPP

Query:  RRPHSGIWFSLQPLELNQ
        RRPHSGIWFSLQ  E NQ
Subjt:  RRPHSGIWFSLQPLELNQ

A0A6J1JTN5 protein LAX PANICLE 2-like6.3e-6466.67Show/hide
Query:  MSHFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLPS
        M+HF+ FH NN+NNNS DHHHHH HLFPLQ    TTTNQ PS  KD  LHD+   D+GWLRLSIGAATPDVVV     HHH  Q PGFRFGLTELDLL  
Subjt:  MSHFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLPS

Query:  DSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAA---TAAAAGSSSD-TVRVIDP
          G + SK +  SS+G      ++P +VL   PPELNWTFRPISS+N SSSNCSSS +P+GPYFS PFQ HPGLDLVAA    AAAAG SSD  +RV+DP
Subjt:  DSGVVGSKLNAESSLGVVGDFSTTPALVLPPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAA---TAAAAGSSSD-TVRVIDP

Query:  PRRPHSGIWFSLQPLELNQ
        PR PHSGIWFSLQP E NQ
Subjt:  PRRPHSGIWFSLQPLELNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28080.1 RING finger protein1.5e-0426.57Show/hide
Query:  PLQDDSTTTTNQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLPSDSGVVGSKLNAESSLGVVGDFSTTPAL
        P++DD T      P      +++     DK WLRL IG    +      K      ++   R    EL L  S S  V S +          D   T  L
Subjt:  PLQDDSTTTTNQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLPSDSGVVGSKLNAESSLGVVGDFSTTPAL

Query:  VLPPQPPELNWTFRPISSYN------SSSSNCSSSF---IPFGPYFSPPFQ----------FHPGLDLVAATAAAAGSSSDTVRVIDPPRRPHSGIWFSL
         LP    +L     P   YN       +  N   SF    P+ P +  PF+           +  L             S   RV+DPPRRPHSG+WF L
Subjt:  VLPPQPPELNWTFRPISSYN------SSSSNCSSSF---IPFGPYFSPPFQ----------FHPGLDLVAATAAAAGSSSDTVRVIDPPRRPHSGIWFSL

Query:  QPLELNQ
        Q  +  +
Subjt:  QPLELNQ

AT5G13250.1 RING finger protein6.5e-0528.94Show/hide
Query:  HFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTT---------------NQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPG
        H    H+   +NN H            Q++  +TT               N N + + +    D     +GWLRLS+G    DV  + +    H      
Subjt:  HFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTT---------------NQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPG

Query:  FRFGLTELDLLPSDSG---VVGSKLNA-----ESSLGVVGD---FSTTPA-LVLPPQPPELNWTFRPISSYNSSSSNCSSSFIP-FGPYFSPPFQFHPGL
         R    EL+L    S     VG  L++       + G++ +   F T P  ++ P         F P +    SSS+  S  +P  G YF     F P L
Subjt:  FRFGLTELDLLPSDSG---VVGSKLNA-----ESSLGVVGD---FSTTPA-LVLPPQPPELNWTFRPISSYNSSSSNCSSSFIP-FGPYFSPPFQFHPGL

Query:  DLVAATAAAAGSSSDTVRVIDPPRRPHSGIWFSLQ
                 AG SS ++RVIDPPRRPHSGIWF LQ
Subjt:  DLVAATAAAAGSSSDTVRVIDPPRRPHSGIWFSLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCATTTTGAGGGTTTCCATAATAATAATACCAACAATAATTCTCATGATCATCATCATCATCATCCTCATCTCTTTCCTCTTCAAGATGATTCAACAACAACAAC
CAACCAAAACCCTTCTACTTCTAAGGATCTAACTCTTCATGATTCCGCTGCCGCCGATAAGGGTTGGCTTCGTCTTAGCATCGGTGCCGCTACGCCTGACGTTGTCGTCA
ACCACAACAAACACCACCATCACCACCATCAATCGCCAGGGTTTCGCTTTGGCTTAACCGAGCTCGACTTATTACCCTCCGACAGTGGCGTCGTTGGTTCGAAATTGAAC
GCCGAGTCGTCGTTGGGGGTCGTTGGAGATTTTTCTACGACTCCGGCGTTGGTTTTGCCTCCGCAGCCACCGGAGCTTAATTGGACGTTTAGACCTATCTCCTCTTATAA
CTCTTCCTCTTCTAATTGCTCTTCTTCTTTTATTCCATTTGGTCCTTACTTTTCACCCCCCTTTCAATTCCACCCTGGACTTGACTTAGTTGCTGCCACCGCCGCCGCCG
CCGGATCCAGCTCCGACACTGTTAGGGTTATCGACCCTCCTCGCCGCCCTCATTCCGGGATTTGGTTTTCTCTTCAACCTTTGGAATTAAACCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCATTTTGAGGGTTTCCATAATAATAATACCAACAATAATTCTCATGATCATCATCATCATCATCCTCATCTCTTTCCTCTTCAAGATGATTCAACAACAACAAC
CAACCAAAACCCTTCTACTTCTAAGGATCTAACTCTTCATGATTCCGCTGCCGCCGATAAGGGTTGGCTTCGTCTTAGCATCGGTGCCGCTACGCCTGACGTTGTCGTCA
ACCACAACAAACACCACCATCACCACCATCAATCGCCAGGGTTTCGCTTTGGCTTAACCGAGCTCGACTTATTACCCTCCGACAGTGGCGTCGTTGGTTCGAAATTGAAC
GCCGAGTCGTCGTTGGGGGTCGTTGGAGATTTTTCTACGACTCCGGCGTTGGTTTTGCCTCCGCAGCCACCGGAGCTTAATTGGACGTTTAGACCTATCTCCTCTTATAA
CTCTTCCTCTTCTAATTGCTCTTCTTCTTTTATTCCATTTGGTCCTTACTTTTCACCCCCCTTTCAATTCCACCCTGGACTTGACTTAGTTGCTGCCACCGCCGCCGCCG
CCGGATCCAGCTCCGACACTGTTAGGGTTATCGACCCTCCTCGCCGCCCTCATTCCGGGATTTGGTTTTCTCTTCAACCTTTGGAATTAAACCAGTAA
Protein sequenceShow/hide protein sequence
MSHFEGFHNNNTNNNSHDHHHHHPHLFPLQDDSTTTTNQNPSTSKDLTLHDSAAADKGWLRLSIGAATPDVVVNHNKHHHHHHQSPGFRFGLTELDLLPSDSGVVGSKLN
AESSLGVVGDFSTTPALVLPPQPPELNWTFRPISSYNSSSSNCSSSFIPFGPYFSPPFQFHPGLDLVAATAAAAGSSSDTVRVIDPPRRPHSGIWFSLQPLELNQ