; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G017980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G017980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTPR_REGION domain-containing protein
Genome locationchr09:26733460..26735348
RNA-Seq ExpressionLsi09G017980
SyntenyLsi09G017980
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0009833 - plant-type primary cell wall biogenesis (biological process)
GO:0030244 - cellulose biosynthetic process (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016759 - cellulose synthase activity (molecular function)
InterPro domainsIPR003107 - HAT (Half-A-TPR) repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039891.1 TPR_11 domain-containing protein [Cucumis melo var. makuwa]6.2e-14174.74Show/hide
Query:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFS-TTASLHSSPSFSDHHRA-APTGFRRTHSEGNLNTLSHASDVIDVHEDS
        MLLKS+STPLLGSLLPPDHHHHH+D +GKH    SPS F FH N K LSFS TTASL+SSPSFSDHHRA AP+GFRRT+SEGNLNT+SHAS+VIDVHED 
Subjt:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFS-TTASLHSSPSFSDHHRA-APTGFRRTHSEGNLNTLSHASDVIDVHEDS

Query:  FSFDSFNFKPSYNLCHS-KRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGA-GDGMG
        FS DS NFK S       KRSILQTIPSFSFYGSRV+TEED+++++D +    D EE ED LGNFG+      +AA++TPEVRAMEQAW+RVGA GDGMG
Subjt:  FSFDSFNFKPSYNLCHS-KRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGA-GDGMG

Query:  FVGDLQKEMYTARGLGI-GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKG
        F GDL+KEMY ARGLGI GGPGDG GGGGR  SGGG GGGGE++GMEEYYKKMVVENPGNALVLSNYAEFLY+AS+                +T+   KG
Subjt:  FVGDLQKEMYTARGLGI-GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKG

Query:  DLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA
        DL  AEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKA+SYFQRALQASPHDSHVQAAYANFLWETEE+EDE S+GKE AT+TYTAAATA
Subjt:  DLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA

KAG7014598.1 hypothetical protein SDJN02_24777, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-13674.15Show/hide
Query:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFSTTASLHSSPSFSDHHRAAPTGFRRTHSEGNLNTLSHASDVIDVHEDSFS
        MLL+S+STPLL SLLPPDH HHHHD +GKHSPSPS S FAF  N K L            SFSDHHRAAPTGFRRTHSEGNL TLSHASDVIDVHED FS
Subjt:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFSTTASLHSSPSFSDHHRAAPTGFRRTHSEGNLNTLSHASDVIDVHEDSFS

Query:  FDSFNFKPSYNLCH-SKRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGAGDGMGFVG
        FDSFNFKPS  L H   RS+L+TIPSFSFYGSR +TEE+DD+DDD    H DPEE E  L NFGVH+  RMDAAIVTP VRAMEQAWTR+ +GDG+GFVG
Subjt:  FDSFNFKPSYNLCH-SKRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGAGDGMGFVG

Query:  DLQKEMYTARGLGIGGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKGDLRG
        DLQKEM+ AR  G GG G G GGGGR+ SGG  GGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQA SK                     KGD+RG
Subjt:  DLQKEMYTARGLGIGGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKGDLRG

Query:  AEEYYSRAILMD-SQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTY
        AEEYYSRAILMD SQDGEILSKYAKLVWELH DQQKA SYFQRALQASPHDSHVQAAYANFLWETEE ED  SLGKEMAT  +
Subjt:  AEEYYSRAILMD-SQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTY

XP_004140576.2 uncharacterized protein LOC101206684 [Cucumis sativus]1.8e-13574.23Show/hide
Query:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFS-TTASLHSSPSFSDHHR-AAPTGFRRTHSEGNLNTLSHASDVIDVHEDS
        MLLKS+STPLLGSLLPPD  HHHHD  GKH    SPS F FH N K LSFS TTASL SSP+FSDHHR AAP+GFRRT+SEGNLNT+SHASDVIDVHED 
Subjt:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFS-TTASLHSSPSFSDHHR-AAPTGFRRTHSEGNLNTLSHASDVIDVHEDS

Query:  FSFDSFNFKPSYNLCHS-KRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGA-GDGMG
        FSFDS NFK S   CH  KRSILQTIPSFSFYGSR +TEE+++++D +     D +E EDGLGNF +      DAAIVTPEVRAMEQAW+RVGA GDGMG
Subjt:  FSFDSFNFKPSYNLCHS-KRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGA-GDGMG

Query:  FVGDLQKEMYTARGLGI-GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKG
        FVGDL+KEMY ARGLGI GGPGDG GGG  QG GGG GGGGE++GMEEYYKKMVVENP NALVLSNYAEFLY                        QRKG
Subjt:  FVGDLQKEMYTARGLGI-GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKG

Query:  DLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA
        DL  AEEYYSRAILMDS DGE LSKYAKLVWELHHDQQKALSYFQRALQASP DSHVQAAYANFLWETEE+EDE SL KE AT+TYTAAATA
Subjt:  DLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA

XP_008459965.1 PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo]9.0e-14073.98Show/hide
Query:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFS-TTASLHSSPSFSDHHRA-APTGFRRTHSEGNLNTLSHASDVIDVHEDS
        MLLKS+STPLLGSLLPPDHHHHH+D +GKH    SPS F FH N K LSFS TTASL+SSPSFSDHHRA AP+GFRRT+SEGNLNT+SHAS+VIDVHED 
Subjt:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFS-TTASLHSSPSFSDHHRA-APTGFRRTHSEGNLNTLSHASDVIDVHEDS

Query:  FSFDSFNFKPSYNLCHS-KRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGA-GDGMG
        FS DS NFK S       KRS+LQTIPSFSFYGSRV+TEED+++++D +    D EE ED LGNFG+      +AA++TPEVRAMEQAW+RVGA GDG+G
Subjt:  FSFDSFNFKPSYNLCHS-KRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGA-GDGMG

Query:  FVGDLQKEMYTARGLGI-GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKG
        FVGDL+KEMY ARGLGI GGPGDG GGGGR  +GGG GGGGE++GMEEYYKKMVVENPGNALVLSNYAEFLY                        +RKG
Subjt:  FVGDLQKEMYTARGLGI-GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKG

Query:  DLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA
        DLR AEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKA+SYFQRALQASPHDSHVQAAYANFLWETEE+EDE S+GKE AT+TYTAAATA
Subjt:  DLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA

XP_038874350.1 uncharacterized protein LOC120067050 isoform X1 [Benincasa hispida]1.4e-14576.49Show/hide
Query:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFSTTASLHSSPSFSDHHRAAPTGFRRTHSEGNLNTLSHASDVIDVHEDSFS
        MLLKS+STPLL SLLPPD   HHHDT+ KHS SPSP PFAFH N KTLSFST ASL+SSPSFS    A PTGFRRTHSEGNLNTLSHA DVIDVHED FS
Subjt:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFSTTASLHSSPSFSDHHRAAPTGFRRTHSEGNLNTLSHASDVIDVHEDSFS

Query:  FDSFNFKPSYNLCHSKRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGAGDGMGFVGD
        FDSFNFKPS N    KRS+LQTIPSFSFY SR +TEEDDDDDD     HTDPEE EDGLG+FG+ +R+  DAAIVTPEV+AME AWT     DG+GFVGD
Subjt:  FDSFNFKPSYNLCHSKRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGAGDGMGFVGD

Query:  LQKEMYTARGLGIGGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKGDLRGA
         QKEMY    LGIGG GDG GGGGR+ SGGG GGGGEQHGMEEYYKKMV+ENPGNALVLSNYAEFLY                        QR+GDLRGA
Subjt:  LQKEMYTARGLGIGGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKGDLRGA

Query:  EEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA
        EEYYSRAILMD+QDGEILSKYAKLVWELHHDQQKAL+YFQRALQASPHDS+VQAAYANFLWETEEDEDEHSLGK MATQTYTAAAT+
Subjt:  EEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA

TrEMBL top hitse value%identityAlignment
A0A061DPH6 Tetratricopeptide repeat-like superfamily protein, putative isoform 14.2e-5844.39Show/hide
Query:  MLLKSASTPLLGSLL------PPDHHHHHHDTIGKHSPSPS----PSPFAFHPNKKTLSFSTTASLHSSP-------SFSDHHRAAPTGFRRTHSEGNLN
        MLL+S+STPLLGSLL      P +++H+   T  +H PS S     +  +FHP+  +L  STT S  SSP        FSD  R    GFRR  SEGNL 
Subjt:  MLLKSASTPLLGSLL------PPDHHHHHHDTIGKHSPSPS----PSPFAFHPNKKTLSFSTTASLHSSP-------SFSDHHRAAPTGFRRTHSEGNLN

Query:  TLSHASDVIDVHEDSFSFDSFNFKPSYNLCHSKRSILQTIPSFSFYGSRVKTEEDDDDDD--DDDGGHTDPEE----GEDGL----GNFGVHSRIRMDAA
         L HA+   D +ED ++ +    +P       +R +LQTIPSFSFY S  + EE++D+ D  +++    + EE    GE+ +    GN   ++  RM+  
Subjt:  TLSHASDVIDVHEDSFSFDSFNFKPSYNLCHSKRSILQTIPSFSFYGSRVKTEEDDDDDD--DDDGGHTDPEE----GEDGL----GNFGVHSRIRMDAA

Query:  IVTPEVRAMEQAWTRVGAGDGMGFVGDLQKEMYTARGLGIGG-------PGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFL
        ++  EV+   ++W  VG  D  G VG+   +M+ ARGL   G        G G GGGG     G  G G   HG+EE+Y++MV ENPGN L L NYA+FL
Subjt:  IVTPEVRAMEQAWTRVGAGDGMGFVGDLQKEMYTARGLGIGG-------PGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFL

Query:  YQASSKFQTRIRTAIPFQVITTTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEED
        YQ+                        K DL  AEEYYSRAIL D +DGE LS+YAKLVWELHHDQ++A SYF+RA+QASP DSHV AAYA+FLWETEED
Subjt:  YQASSKFQTRIRTAIPFQVITTTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEED

Query:  E
        E
Subjt:  E

A0A061DWD9 Tetratricopeptide repeat-like superfamily protein, putative isoform 24.2e-5844.39Show/hide
Query:  MLLKSASTPLLGSLL------PPDHHHHHHDTIGKHSPSPS----PSPFAFHPNKKTLSFSTTASLHSSP-------SFSDHHRAAPTGFRRTHSEGNLN
        MLL+S+STPLLGSLL      P +++H+   T  +H PS S     +  +FHP+  +L  STT S  SSP        FSD  R    GFRR  SEGNL 
Subjt:  MLLKSASTPLLGSLL------PPDHHHHHHDTIGKHSPSPS----PSPFAFHPNKKTLSFSTTASLHSSP-------SFSDHHRAAPTGFRRTHSEGNLN

Query:  TLSHASDVIDVHEDSFSFDSFNFKPSYNLCHSKRSILQTIPSFSFYGSRVKTEEDDDDDD--DDDGGHTDPEE----GEDGL----GNFGVHSRIRMDAA
         L HA+   D +ED ++ +    +P       +R +LQTIPSFSFY S  + EE++D+ D  +++    + EE    GE+ +    GN   ++  RM+  
Subjt:  TLSHASDVIDVHEDSFSFDSFNFKPSYNLCHSKRSILQTIPSFSFYGSRVKTEEDDDDDD--DDDGGHTDPEE----GEDGL----GNFGVHSRIRMDAA

Query:  IVTPEVRAMEQAWTRVGAGDGMGFVGDLQKEMYTARGLGIGG-------PGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFL
        ++  EV+   ++W  VG  D  G VG+   +M+ ARGL   G        G G GGGG     G  G G   HG+EE+Y++MV ENPGN L L NYA+FL
Subjt:  IVTPEVRAMEQAWTRVGAGDGMGFVGDLQKEMYTARGLGIGG-------PGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFL

Query:  YQASSKFQTRIRTAIPFQVITTTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEED
        YQ+                        K DL  AEEYYSRAIL D +DGE LS+YAKLVWELHHDQ++A SYF+RA+QASP DSHV AAYA+FLWETEED
Subjt:  YQASSKFQTRIRTAIPFQVITTTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEED

Query:  E
        E
Subjt:  E

A0A0A0KA70 TPR_REGION domain-containing protein1.4e-11772.47Show/hide
Query:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFS-TTASLHSSPSFSDHHR-AAPTGFRRTHSEGNLNTLSHASDVIDVHEDS
        MLLKS+STPLLGSLLPPD  HHHHD  GKH    SPS F FH N K LSFS TTASL SSP+FSDHHR AAP+GFRRT+SEGNLNT+SHASDVIDVHED 
Subjt:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFS-TTASLHSSPSFSDHHR-AAPTGFRRTHSEGNLNTLSHASDVIDVHEDS

Query:  FSFDSFNFKPSYNLCHS-KRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGA-GDGMG
        FSFDS NFK S   CH  KRSILQTIPSFSFYGSR +TEE+++++D +     D +E EDGLGNF +      DAAIVTPEVRAMEQAW+RVGA GDGMG
Subjt:  FSFDSFNFKPSYNLCHS-KRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGA-GDGMG

Query:  FVGDLQKEMYTARGLGI-GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKG
        FVGDL+KEMY ARGLGI GGPGDG GGG  QG GGG GGGGE++GMEEYYKKMVVENP NALVLSNYAEFLY                        QRKG
Subjt:  FVGDLQKEMYTARGLGI-GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKG

Query:  DLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSH
        DL  AEEYYSRAILMDS DGE LSKYAKLVWELHHDQQKALSYFQRALQASP D +
Subjt:  DLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSH

A0A1S3CCM7 uncharacterized protein LOC1034989234.3e-14073.98Show/hide
Query:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFS-TTASLHSSPSFSDHHRA-APTGFRRTHSEGNLNTLSHASDVIDVHEDS
        MLLKS+STPLLGSLLPPDHHHHH+D +GKH    SPS F FH N K LSFS TTASL+SSPSFSDHHRA AP+GFRRT+SEGNLNT+SHAS+VIDVHED 
Subjt:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFS-TTASLHSSPSFSDHHRA-APTGFRRTHSEGNLNTLSHASDVIDVHEDS

Query:  FSFDSFNFKPSYNLCHS-KRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGA-GDGMG
        FS DS NFK S       KRS+LQTIPSFSFYGSRV+TEED+++++D +    D EE ED LGNFG+      +AA++TPEVRAMEQAW+RVGA GDG+G
Subjt:  FSFDSFNFKPSYNLCHS-KRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGA-GDGMG

Query:  FVGDLQKEMYTARGLGI-GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKG
        FVGDL+KEMY ARGLGI GGPGDG GGGGR  +GGG GGGGE++GMEEYYKKMVVENPGNALVLSNYAEFLY                        +RKG
Subjt:  FVGDLQKEMYTARGLGI-GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKG

Query:  DLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA
        DLR AEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKA+SYFQRALQASPHDSHVQAAYANFLWETEE+EDE S+GKE AT+TYTAAATA
Subjt:  DLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA

A0A5A7TE10 TPR_11 domain-containing protein3.0e-14174.74Show/hide
Query:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFS-TTASLHSSPSFSDHHRA-APTGFRRTHSEGNLNTLSHASDVIDVHEDS
        MLLKS+STPLLGSLLPPDHHHHH+D +GKH    SPS F FH N K LSFS TTASL+SSPSFSDHHRA AP+GFRRT+SEGNLNT+SHAS+VIDVHED 
Subjt:  MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFS-TTASLHSSPSFSDHHRA-APTGFRRTHSEGNLNTLSHASDVIDVHEDS

Query:  FSFDSFNFKPSYNLCHS-KRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGA-GDGMG
        FS DS NFK S       KRSILQTIPSFSFYGSRV+TEED+++++D +    D EE ED LGNFG+      +AA++TPEVRAMEQAW+RVGA GDGMG
Subjt:  FSFDSFNFKPSYNLCHS-KRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGA-GDGMG

Query:  FVGDLQKEMYTARGLGI-GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKG
        F GDL+KEMY ARGLGI GGPGDG GGGGR  SGGG GGGGE++GMEEYYKKMVVENPGNALVLSNYAEFLY+AS+                +T+   KG
Subjt:  FVGDLQKEMYTARGLGI-GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKG

Query:  DLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA
        DL  AEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKA+SYFQRALQASPHDSHVQAAYANFLWETEE+EDE S+GKE AT+TYTAAATA
Subjt:  DLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04530.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-2142.22Show/hide
Query:  GGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQK
        G +     +YYK M+ E P + L+L NYA+FL                         + KGDL GAEEYY +  +++  DG  L+ Y +LV +LH D+ K
Subjt:  GGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQK

Query:  ALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE
        A+SYF+RA+QASP DS V AAYA+FLWE   D+D+
Subjt:  ALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE

AT1G80130.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.0e-2436.6Show/hide
Query:  MEQAWTRVGAGDGMGFVGDLQKEMYTARGLGIGGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAI
        +E+ ++  G GD      D  + + +  G G+GG G     GG    G G  GG  +   + YY++M+  NPGN+L+  NYA+FL +             
Subjt:  MEQAWTRVGAGDGMGFVGDLQKEMYTARGLGIGGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAI

Query:  PFQVITTTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKE
                    KGD++ AEEY  RAIL ++ DG +LS YA L+   H D+Q+A SY+++A++ SP D +VQA+YA FLW+ +EDE++ +LG+E
Subjt:  PFQVITTTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKE

AT4G17940.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.6e-2339.01Show/hide
Query:  RVGAGDGMGFVGDLQKEMYTARGLGIGGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVIT
        R   G G    G L  E     G G+GG   GSG  G  G+GGG GG  ++  + +YY++M+  NP N+L+L NY +FLY+                   
Subjt:  RVGAGDGMGFVGDLQKEMYTARGLGIGGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVIT

Query:  TTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE
                D  GAEEYY RAIL +  DGE LS Y +L+WE   D+++A  YF +A+ ASP+D  V  +YA F+WE E+D+D+
Subjt:  TTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE

AT4G32340.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.4e-2142.68Show/hide
Query:  GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKGDLRGAEEYYSRAILMDS-
        GG   G GG G  G+GGG GGGG    ++ YY++M+   PG+ L+LSNYA FL +                         KGD R AEEY  RA+L +S 
Subjt:  GGPGDGSGGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKGDLRGAEEYYSRAILMDS-

Query:  QDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE
        +DGE+LS Y  L+W+ H D  +A SY+ +A+Q+SP D +V A+YA FLW+ EE+ +E
Subjt:  QDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE

AT5G20190.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.6e-2338.04Show/hide
Query:  RVGAGDGMGFVGDLQKEMYTARGLGIGGPGDGSGGGGRQGSGGGR--GGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQV
        R  + DG+ +  D   E+        GG G G   GG +G  GGR  GG G     + +Y+KM+  NPGN + LSNYA+FL +                 
Subjt:  RVGAGDGMGFVGDLQKEMYTARGLGIGGPGDGSGGGGRQGSGGGR--GGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQV

Query:  ITTTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE
                + D   AEEY  RAIL+   DG +L+ YA+LVW++H D  +A +YF +A+ A+P D +VQA+YA FLW+ EE+E+E
Subjt:  ITTTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTTAAAAGCGCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCACCGGACCACCACCACCACCACCACGACACTATTGGAAAACACTCCCCCTCCCCTTCCCCTTC
CCCCTTCGCCTTCCACCCCAACAAAAAAACGCTTTCTTTCTCCACCACTGCTTCTCTACACTCCTCGCCTTCTTTCTCCGATCACCACCGCGCCGCTCCCACTGGCTTCC
GGAGAACCCACTCCGAAGGAAATTTGAATACCCTTTCCCATGCTTCTGATGTAATCGATGTCCATGAAGACTCATTTTCCTTTGATTCCTTCAATTTCAAACCCTCTTAT
AATCTTTGCCATAGCAAACGCTCCATTCTCCAGACTATACCATCGTTTTCCTTCTACGGTTCTAGAGTCAAGACTGAGGAAGATGATGATGACGACGACGACGACGACGG
AGGACATACTGATCCGGAGGAAGGTGAAGATGGCTTGGGGAATTTTGGTGTTCACAGCAGGATTAGGATGGACGCTGCCATTGTAACTCCGGAGGTTAGGGCCATGGAAC
AAGCTTGGACTAGAGTGGGTGCTGGTGATGGGATGGGGTTTGTGGGTGATTTACAGAAAGAGATGTATACGGCTAGAGGGCTCGGCATTGGAGGACCGGGTGATGGCAGC
GGTGGTGGTGGTCGACAGGGGAGTGGTGGAGGCCGTGGTGGAGGGGGTGAGCAACATGGCATGGAGGAGTATTACAAGAAAATGGTGGTGGAAAATCCAGGGAATGCTCT
GGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGGCAAGTTCTAAGTTTCAAACGAGAATTAGGACTGCCATACCATTTCAAGTCATCACAACTACAGTGTTTCAAAGGA
AAGGAGACCTACGAGGAGCGGAAGAGTATTACAGCAGAGCCATTTTGATGGATTCCCAAGATGGAGAAATTTTGTCAAAATATGCTAAGTTAGTGTGGGAGTTGCATCAT
GACCAACAAAAAGCTTTATCATATTTCCAACGGGCTCTCCAAGCTTCCCCACATGACAGCCACGTGCAAGCAGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGGATGA
AGATGAACACAGCTTAGGAAAAGAGATGGCAACACAGACTTACACGGCAGCTGCAACTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCTTAAAAGCGCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCACCGGACCACCACCACCACCACCACGACACTATTGGAAAACACTCCCCCTCCCCTTCCCCTTC
CCCCTTCGCCTTCCACCCCAACAAAAAAACGCTTTCTTTCTCCACCACTGCTTCTCTACACTCCTCGCCTTCTTTCTCCGATCACCACCGCGCCGCTCCCACTGGCTTCC
GGAGAACCCACTCCGAAGGAAATTTGAATACCCTTTCCCATGCTTCTGATGTAATCGATGTCCATGAAGACTCATTTTCCTTTGATTCCTTCAATTTCAAACCCTCTTAT
AATCTTTGCCATAGCAAACGCTCCATTCTCCAGACTATACCATCGTTTTCCTTCTACGGTTCTAGAGTCAAGACTGAGGAAGATGATGATGACGACGACGACGACGACGG
AGGACATACTGATCCGGAGGAAGGTGAAGATGGCTTGGGGAATTTTGGTGTTCACAGCAGGATTAGGATGGACGCTGCCATTGTAACTCCGGAGGTTAGGGCCATGGAAC
AAGCTTGGACTAGAGTGGGTGCTGGTGATGGGATGGGGTTTGTGGGTGATTTACAGAAAGAGATGTATACGGCTAGAGGGCTCGGCATTGGAGGACCGGGTGATGGCAGC
GGTGGTGGTGGTCGACAGGGGAGTGGTGGAGGCCGTGGTGGAGGGGGTGAGCAACATGGCATGGAGGAGTATTACAAGAAAATGGTGGTGGAAAATCCAGGGAATGCTCT
GGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGGCAAGTTCTAAGTTTCAAACGAGAATTAGGACTGCCATACCATTTCAAGTCATCACAACTACAGTGTTTCAAAGGA
AAGGAGACCTACGAGGAGCGGAAGAGTATTACAGCAGAGCCATTTTGATGGATTCCCAAGATGGAGAAATTTTGTCAAAATATGCTAAGTTAGTGTGGGAGTTGCATCAT
GACCAACAAAAAGCTTTATCATATTTCCAACGGGCTCTCCAAGCTTCCCCACATGACAGCCACGTGCAAGCAGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGGATGA
AGATGAACACAGCTTAGGAAAAGAGATGGCAACACAGACTTACACGGCAGCTGCAACTGCTTGAGATGAAACATTTTCAAAGTTGTTCCATGTTTCTGCAATGCAATGGA
AGTGAAGAAACAAACAAGAATAACAGAGGTAGTAGGGG
Protein sequenceShow/hide protein sequence
MLLKSASTPLLGSLLPPDHHHHHHDTIGKHSPSPSPSPFAFHPNKKTLSFSTTASLHSSPSFSDHHRAAPTGFRRTHSEGNLNTLSHASDVIDVHEDSFSFDSFNFKPSY
NLCHSKRSILQTIPSFSFYGSRVKTEEDDDDDDDDDGGHTDPEEGEDGLGNFGVHSRIRMDAAIVTPEVRAMEQAWTRVGAGDGMGFVGDLQKEMYTARGLGIGGPGDGS
GGGGRQGSGGGRGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSKFQTRIRTAIPFQVITTTVFQRKGDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHH
DQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKEMATQTYTAAATA