; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G018060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G018060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRmlC-like cupins superfamily protein
Genome locationchr09:26835246..26836114
RNA-Seq ExpressionLsi09G018060
SyntenyLsi09G018060
Gene Ontology termsNA
InterPro domainsIPR008579 - (S)-ureidoglycine aminohydrolase, cupin-3 domain
IPR011051 - RmlC-like cupin domain superfamily
IPR014710 - RmlC-like jelly roll fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8014841.1 hypothetical protein BT93_H0587 [Corymbia citriodora subsp. variegata]5.8e-4271.3Show/hide
Query:  ADNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTWD
        +    S + N+L+I+VERNP ++KLS+LNI CWPKWGC  GK+QLKF+AEETCYLVKGKVK YP+G  SSS++SSS +++ EFGAGDLVIIPKGLSCTWD
Subjt:  ADNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTWD

Query:  VSVAVDKFYKFESQS
        VSVAVDK+YKFES S
Subjt:  VSVAVDKFYKFESQS

XP_004140583.1 uncharacterized protein LOC101208389 [Cucumis sativus]8.0e-5290.76Show/hide
Query:  MADNEESKTNNH--LKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSS-CEEYTEFGAGDLVIIPKGLS
        MA+ EE   NN+  LKIIVERNPSQAKLSQLNIH WPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSS CEEY EFGAGDLVIIPKGLS
Subjt:  MADNEESKTNNH--LKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSS-CEEYTEFGAGDLVIIPKGLS

Query:  CTWDVSVAVDKFYKFESQS
        CTWDVSVAVDKFYKFESQS
Subjt:  CTWDVSVAVDKFYKFESQS

XP_008459983.1 PREDICTED: uncharacterized protein LOC103498932 [Cucumis melo]2.3e-5191.3Show/hide
Query:  DNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSS-CEEYTEFGAGDLVIIPKGLSCTWD
        ++    TNN LKIIVERNPSQAKLSQLNIH WPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSS CEEY EFGAGDLVIIPKGLSCTWD
Subjt:  DNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSS-CEEYTEFGAGDLVIIPKGLSCTWD

Query:  VSVAVDKFYKFESQS
        VSVAVDKFYKFESQS
Subjt:  VSVAVDKFYKFESQS

XP_030454772.1 uncharacterized protein LOC115676055 [Syzygium oleosum]2.6e-4271.9Show/hide
Query:  ADNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSC------EEYTEFGAGDLVIIPKG
        A N  S + N+L+I+VERNP ++KLS+LNI CWPKWGC  GKYQLKF+AEETCYLVKGKVK YP+G  SSSSSSSS       +++ EFGAGDLVIIPKG
Subjt:  ADNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSC------EEYTEFGAGDLVIIPKG

Query:  LSCTWDVSVAVDKFYKFESQS
        LSCTWDVSVAVDK+YKFES S
Subjt:  LSCTWDVSVAVDKFYKFESQS

XP_038906875.1 uncharacterized protein LOC120092760 [Benincasa hispida]6.1e-5289.26Show/hide
Query:  MADNEES-----KTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKG
        MA+NEE       TNN+LKIIVERNPSQAKLSQLNIH WPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGID  SSSSSSCEEYTEFGAGDLV IPKG
Subjt:  MADNEES-----KTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKG

Query:  LSCTWDVSVAVDKFYKFESQS
        LSCTWDVSVAVDKFYKFESQS
Subjt:  LSCTWDVSVAVDKFYKFESQS

TrEMBL top hitse value%identityAlignment
A0A058ZV10 Cupin_3 domain-containing protein2.6e-4071.3Show/hide
Query:  NEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDS--SSSSSSSCEEYTEFGAGDLVIIPKGLSCTWD
        +  S + N L+I+VER+P ++KLS+LNI CWPKWGC  GKYQLKF+AEETCYLVKGKVK YP+G  S  SS+S+SS +++ EFGAGDLVIIPKGLSCTWD
Subjt:  NEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDS--SSSSSSSCEEYTEFGAGDLVIIPKGLSCTWD

Query:  VSVAVDKFYKFESQS
        VSVAVDK+YKFES S
Subjt:  VSVAVDKFYKFESQS

A0A1S3CBJ5 uncharacterized protein LOC1034989321.1e-5191.3Show/hide
Query:  DNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSS-CEEYTEFGAGDLVIIPKGLSCTWD
        ++    TNN LKIIVERNPSQAKLSQLNIH WPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSS CEEY EFGAGDLVIIPKGLSCTWD
Subjt:  DNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSS-CEEYTEFGAGDLVIIPKGLSCTWD

Query:  VSVAVDKFYKFESQS
        VSVAVDKFYKFESQS
Subjt:  VSVAVDKFYKFESQS

A0A6J1H6X6 uncharacterized protein LOC1114609985.3e-4177.78Show/hide
Query:  NEESKTN----NHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCT
        NEE  +N    N+L+IIVERNPSQAKLS LNI  WPKWGCSAGKYQLKFEAEETCYLVKGKVKAY KG        S+  EYTEFGAGDLV IPKGLSCT
Subjt:  NEESKTN----NHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCT

Query:  WDVSVAVDKFYKFESQS
        WDVSVAVDKFYKFES S
Subjt:  WDVSVAVDKFYKFESQS

A0A6J1KU03 uncharacterized protein LOC1114981881.2e-4076.92Show/hide
Query:  NEESKTN----NHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCT
        NEE  +N    N+L+IIVERNPS+AKLS LNI  WPKWGCSAGKYQLKFEAEETCYLVKGKVKAY KG        S+  EYTEFGAGDLV IPKGLSCT
Subjt:  NEESKTN----NHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCT

Query:  WDVSVAVDKFYKFESQS
        WDVSVAVDKFYKFES S
Subjt:  WDVSVAVDKFYKFESQS

A0A7J6GW53 Cupin_3 domain-containing protein3.4e-4074.34Show/hide
Query:  NEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTWDVS
        N  S  ++ L+IIVE NPS+AKLS+LNI CWPKWGCS GKYQLKF+AEETCYLV+GKVKAY KG  S S S S  E   EFGAGDLV+IPKGLSCTWDVS
Subjt:  NEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTWDVS

Query:  VAVDKFYKFESQS
        VAVDK+YKFES S
Subjt:  VAVDKFYKFESQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32650.1 RmlC-like cupins superfamily protein2.1e-0531.25Show/hide
Query:  VERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGL
        VER  SQ +L +L +  W  W     K    ++ ++  Y+ +G+V+  P+G           + Y +F AGDLV  PK L
Subjt:  VERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGL

AT3G04300.1 RmlC-like cupins superfamily protein1.7e-3159.41Show/hide
Query:  LKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFYKF
        + I++E NPS  +LS L +  WPKW C  GKY L FE  ETCYLVKGKVK YPKG            E+ EFGAGDLV IPKGLSCTWDVS+ +DK YKF
Subjt:  LKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFYKF

Query:  E
        +
Subjt:  E

AT4G10280.1 RmlC-like cupins superfamily protein1.6e-1335.71Show/hide
Query:  ADNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTWD
        +D+E     + +KI+  R  S  KL+QL +  WPKW  +  K+  +F+  ET Y ++GKVK    G D         EE  E G GD+V+ PK +   W+
Subjt:  ADNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTWD

Query:  VSVAVDKFYKFE
        ++ AV K Y  E
Subjt:  VSVAVDKFYKFE

AT4G10300.1 RmlC-like cupins superfamily protein8.6e-2849.56Show/hide
Query:  MADNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTW
        MA    +++   L I +E+NP ++KL+QL +  WPKWGC   K+   + A+ETCYL++GKVK YP G D          E  E  AGD V+ PKG+SCTW
Subjt:  MADNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTW

Query:  DVSVAVDKFYKFE
        DVSVAVDK Y+FE
Subjt:  DVSVAVDKFYKFE

AT4G28703.1 RmlC-like cupins superfamily protein5.2e-3364.36Show/hide
Query:  KIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFE
        +IIVE+NPSQA+L +L    WPKWGCS GKY LK+EAEE CY+++GKVK YPK    SSSS +  E   EFGAGD+V  PKGLSCTWDVS++VDK Y F 
Subjt:  KIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFE

Query:  S
        S
Subjt:  S


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATAATGAAGAAAGCAAAACAAACAACCACCTCAAAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTTTCACAGCTCAACATCCACTGTTGGCCAAAATG
GGGTTGTTCAGCAGGGAAATACCAGCTGAAATTTGAGGCAGAAGAGACTTGCTATTTAGTGAAAGGGAAAGTAAAGGCTTATCCTAAAGGAATTGATTCTTCTTCTTCTT
CTTCTTCTTCTTGTGAGGAATACACTGAATTTGGAGCTGGGGATTTGGTCATTATTCCTAAAGGCCTTAGCTGCACTTGGGATGTCTCTGTTGCTGTTGATAAGTTCTAC
AAGTTCGAATCTCAATCTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAGCCTCTTACTTGTCTATATATAAATCTCACACAACCTTCTTCTTCTTCAATTCTTCTAATTCTCTTCCATTCAAAATCAAAAGAGATTCATTTCCTTTCCTTTCAT
AATCCTCTCTATAAATTCCTCTACAATCCCACCCTTCTCTTTTTTCCTTACCCTTCTTGTAAGGCAAAAGTAAAAGAGAAAAAGAAAAAAAATAAAAGAAAAGAAAAATC
CATTCCCTCTTTCTTCTCATCTATCTTTAGTAATGGCAGATAATGAAGAAAGCAAAACAAACAACCACCTCAAAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTT
TCACAGCTCAACATCCACTGTTGGCCAAAATGGGGTTGTTCAGCAGGGAAATACCAGCTGAAATTTGAGGCAGAAGAGACTTGCTATTTAGTGAAAGGGAAAGTAAAGGC
TTATCCTAAAGGAATTGATTCTTCTTCTTCTTCTTCTTCTTCTTGTGAGGAATACACTGAATTTGGAGCTGGGGATTTGGTCATTATTCCTAAAGGCCTTAGCTGCACTT
GGGATGTCTCTGTTGCTGTTGATAAGTTCTACAAGTTCGAATCTCAATCTTAATTTTATTTTTATTTTAATTAATTAATTACCATTTCCCCATTCTTTCCTGCTTTGTAA
ATAAATATTTTTTCTCCTTCTTCTTAATTTTCTGCATAATTTCCTTTTTTCTTTTTTAGTATATGGGTGAGAAAGTCTGGATCTCTCGTTCTTTAGGTCAAAAC
Protein sequenceShow/hide protein sequence
MADNEESKTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFY
KFESQS