; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G018200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G018200
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBEST Arabidopsis thaliana protein match is: reduced male fertility .
Genome locationchr09:27009916..27014154
RNA-Seq ExpressionLsi09G018200
SyntenyLsi09G018200
Gene Ontology termsGO:0061458 - reproductive system development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575300.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]3.0e-15183.43Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSPNSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKS
        MGKKLSIASARDRVVTRSQSIAMER K+   SSPN VVA EPEG+VKRMRRDIKPIHSCSSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDG+S
Subjt:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSPNSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKS

Query:  LMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNT
        LMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV LLSERLGSQ+KIPKQDS DNT
Subjt:  LMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNT

Query:  LESGCCVLHNVKTGIWIAGTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS-------------------------
        LESGCC+L NVKTGIWIAGTMQTLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHLKDSSTS                         
Subjt:  LESGCCVLHNVKTGIWIAGTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS-------------------------

Query:  -----------GVHVKYQAMRAGAKGEVVSIRISQQLL
                   GVHVKYQAM+AGA GEVVSIRISQQLL
Subjt:  -----------GVHVKYQAMRAGAKGEVVSIRISQQLL

TYK24589.1 putative F-box protein [Cucumis melo var. makuwa]2.6e-15081.18Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSP--NSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDG
        M KKLSIASARDRVVTRSQSI+MERAKM KRSSP  N VVAAEPEG+VKRMRRDIKPIHSCSSP SAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDG
Subjt:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSP--NSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDG

Query:  KSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTD
        +SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVALLSERLGSQMK+PKQ ST 
Subjt:  KSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTD

Query:  NTLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS-------
        NTLESGCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL+DSSTS       
Subjt:  NTLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS-------

Query:  -----------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL
                                     GVHVKYQAMRAGA GEVVSIRISQQLL
Subjt:  -----------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL

XP_004140675.1 probable F-box protein At3g61730 [Cucumis sativus]5.5e-15382.54Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSP-NSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGK
        MGKKLSIASARDRVVTRSQSI+MERAKM KRSSP N VVAAEPEG+VKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDG+
Subjt:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSP-NSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGK

Query:  SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDN
        SLMMLAATSRWFYR VMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDN
Subjt:  SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDN

Query:  TLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS--------
        TLESGCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL+DSSTS        
Subjt:  TLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS--------

Query:  ----------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL
                                    GVHVKYQAMRAGA GEVVSIRISQQLL
Subjt:  ----------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL

XP_023548391.1 probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo]7.5e-15080.51Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSPNSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKS
        MGKKLSIASARDRVVTRSQSIAMER K+   SSPN VVA EPEG+VKRMRRDIKPIHSCSSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDG+S
Subjt:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSPNSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKS

Query:  LMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNT
        LMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV LLSERLGSQ+KIPKQDSTDNT
Subjt:  LMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNT

Query:  LESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS---------
        LESGCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHLKDSSTS         
Subjt:  LESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS---------

Query:  ---------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL
                                   GVHVKYQAM+AGA GEVVSIRISQQLL
Subjt:  ---------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL

XP_038875515.1 probable F-box protein At3g61730 [Benincasa hispida]7.7e-15583.33Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSPNSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKS
        MGKKLSIASARDRVVTRS SIAMERAKM KRSSPNSVVAAEPEG VKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDG+S
Subjt:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSPNSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKS

Query:  LMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNT
        LMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTD T
Subjt:  LMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNT

Query:  LESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS---------
        LESGCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS         
Subjt:  LESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS---------

Query:  ---------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL
                                   GVHVKYQAM+AGA GEVVSIRISQQLL
Subjt:  ---------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL

TrEMBL top hitse value%identityAlignment
A0A0A0KD88 Uncharacterized protein2.7e-15382.54Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSP-NSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGK
        MGKKLSIASARDRVVTRSQSI+MERAKM KRSSP N VVAAEPEG+VKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDG+
Subjt:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSP-NSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGK

Query:  SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDN
        SLMMLAATSRWFYR VMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDN
Subjt:  SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDN

Query:  TLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS--------
        TLESGCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL+DSSTS        
Subjt:  TLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS--------

Query:  ----------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL
                                    GVHVKYQAMRAGA GEVVSIRISQQLL
Subjt:  ----------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL

A0A1S3CBL0 probable F-box protein At3g617301.2e-14080.54Show/hide
Query:  MERAKMLKRSSP--NSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSI
        MERAKM KRSSP  N VVAAEPEG+VKRMRRDIKPIHSCSSP SAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDG+SLMMLAATSRWFYRLVMEDSI
Subjt:  MERAKMLKRSSP--NSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSI

Query:  WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA--
        WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVALLSERLGSQMK+PKQ ST NTLESGCCVLHNVKTGIWIA  
Subjt:  WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA--

Query:  --------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS-----------------------------
                      GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL+DSSTS                             
Subjt:  --------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS-----------------------------

Query:  -------GVHVKYQAMRAGAKGEVVSIRISQQLL
               GVHVKYQAMRAGA GEVVSIRISQQLL
Subjt:  -------GVHVKYQAMRAGAKGEVVSIRISQQLL

A0A5D3DMQ8 Putative F-box protein1.2e-15081.18Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSP--NSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDG
        M KKLSIASARDRVVTRSQSI+MERAKM KRSSP  N VVAAEPEG+VKRMRRDIKPIHSCSSP SAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDG
Subjt:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSP--NSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDG

Query:  KSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTD
        +SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVALLSERLGSQMK+PKQ ST 
Subjt:  KSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTD

Query:  NTLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS-------
        NTLESGCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL+DSSTS       
Subjt:  NTLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS-------

Query:  -----------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL
                                     GVHVKYQAMRAGA GEVVSIRISQQLL
Subjt:  -----------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL

A0A6J1DCT6 probable F-box protein At3g617302.6e-13273.67Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSPNSVVAAEPEG-LVKRMRRDIKP--IHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLD
        MGKKLSI+SARDRVVTRSQS AMER ++ KRS    + AAEPEG + KR+RRD+K   IH CSSPRSAFLT        ASSSSCWYDADVWTEVAKFLD
Subjt:  MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSPNSVVAAEPEG-LVKRMRRDIKP--IHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLD

Query:  GKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDST
        G+SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF +DSSVALLSERLGSQ+KIPKQDS 
Subjt:  GKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDST

Query:  DNTLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS------
        DN LESGCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHL+DSSTS      
Subjt:  DNTLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTS------

Query:  ------------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL
                                      GVHVKYQAMR GA GEVVSIRISQQLL
Subjt:  ------------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL

A0A6J1EVC3 probable F-box protein At3g617302.5e-11177.86Show/hide
Query:  YDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSE
        YDADVWTEVAKFLDG+SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV LLSE
Subjt:  YDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSE

Query:  RLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVK
        RLGSQ+KIPKQDS DNTLESGCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVK
Subjt:  RLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVK

Query:  HLKDSSTS------------------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL
        HLKDSSTS                                    GVHVKYQAM+AGA GEVVSIRISQQLL
Subjt:  HLKDSSTS------------------------------------GVHVKYQAMRAGAKGEVVSIRISQQLL

SwissProt top hitse value%identityAlignment
Q9FGB8 Probable F-box protein At5g360003.1e-7446.53Show/hide
Query:  IKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGS
        ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDGKSL+ L AT++WFY++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGS
Subjt:  IKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGS

Query:  HSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLE-SGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNE
        HSY+F Q+EKH+DWMR+GAF LDS  + L+E L  ++K+P + + +  L+ SG C+++++K+GIWIA                GTMQTLD RHIELFL+E
Subjt:  HSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLE-SGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNE

Query:  GYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSG--------------------------VH----------VKYQAMRAGAKGEVVSIRISQ
        GY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+SG                          VH          VKY  M+AG  G++VSIRISQ
Subjt:  GYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSG--------------------------VH----------VKYQAMRAGAKGEVVSIRISQ

Query:  QLL
        QLL
Subjt:  QLL

Q9M365 Probable F-box protein At3g617301.9e-7644.12Show/hide
Query:  RAKMLKRSSPNSVVAAEPEGLVKRM---------RRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLV
        + K+++ +   + +  E +G  KR           + ++ I  C SPR +  T  S  S        WY+ D+WT +++FLDGKSL+ L AT++WFY++ 
Subjt:  RAKMLKRSSPNSVVAAEPEGLVKRM---------RRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLV

Query:  MEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLE-SGCCVLHNVKTG
        MED++W++ CLRDLQVP P   +  WIK+Y SAFDGSHSY+FRQ+EKH+DWMRIGAF LDS  +LL+E L  ++K P++ + +  L+ SG C+++++K+G
Subjt:  MEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLE-SGCCVLHNVKTG

Query:  IWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSG----------------------
        IWIA                GTMQTLDARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SG                      
Subjt:  IWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSG----------------------

Query:  ----VH----------VKYQAMRAGAKGEVVSIRISQQLL
            VH          VKY  M+AG  G++VSIRISQQLL
Subjt:  ----VH----------VKYQAMRAGAKGEVVSIRISQQLL

Arabidopsis top hitse value%identityAlignment
AT3G61730.1 reduced male fertility2.3e-7242.94Show/hide
Query:  RAKMLKRSSPNSVVAAEPEGLVKRM---------RRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLV
        + K+++ +   + +  E +G  KR           + ++ I  C SPR +  T  S  S        WY+ D+WT +++FLDGKSL+ L AT++WFY++ 
Subjt:  RAKMLKRSSPNSVVAAEPEGLVKRM---------RRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLV

Query:  MEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLE-SGCCVLHNVKTG
        MED++W++ CLRDLQVP P   +  WIK+Y SAFDGSHSY+FRQ+EKH     IGAF LDS  +LL+E L  ++K P++ + +  L+ SG C+++++K+G
Subjt:  MEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLE-SGCCVLHNVKTG

Query:  IWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSG----------------------
        IWIA                GTMQTLDARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SG                      
Subjt:  IWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSG----------------------

Query:  ----VH----------VKYQAMRAGAKGEVVSIRISQQLL
            VH          VKY  M+AG  G++VSIRISQQLL
Subjt:  ----VH----------VKYQAMRAGAKGEVVSIRISQQLL

AT3G62500.1 BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1)5.9e-2851.33Show/hide
Query:  DWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIAGTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIF
        DWM IGAF LDS  +LL+E L  ++K+PK+ + +  L+    ++  V        TMQTLDARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIF
Subjt:  DWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIAGTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIF

Query:  DVKHLKDSSTSGV
        D+KH K+SS+SG+
Subjt:  DVKHLKDSSTSGV

AT5G36000.1 BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1)2.2e-7546.53Show/hide
Query:  IKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGS
        ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDGKSL+ L AT++WFY++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGS
Subjt:  IKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGS

Query:  HSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLE-SGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNE
        HSY+F Q+EKH+DWMR+GAF LDS  + L+E L  ++K+P + + +  L+ SG C+++++K+GIWIA                GTMQTLD RHIELFL+E
Subjt:  HSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLE-SGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNE

Query:  GYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSG--------------------------VH----------VKYQAMRAGAKGEVVSIRISQ
        GY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+SG                          VH          VKY  M+AG  G++VSIRISQ
Subjt:  GYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSG--------------------------VH----------VKYQAMRAGAKGEVVSIRISQ

Query:  QLL
        QLL
Subjt:  QLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGAAACTGAGCATTGCCTCAGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGCAAAAATGTTGAAGCGATCATCGCCAAATTCAGT
TGTTGCTGCAGAGCCGGAAGGATTGGTAAAGCGAATGCGAAGGGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGCGCATTCTTCTGCTT
CATCCTCTGCATCTTCGTCTTCCTGCTGGTACGACGCGGACGTTTGGACAGAGGTTGCGAAGTTTCTGGATGGAAAATCTTTGATGATGCTTGCGGCGACTAGCCGGTGG
TTTTATCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTCCAGGTCCCTGCCCCTCAACATACGGCCTTCAAATGGATCAAACTTTACGTTTC
TGCCTTCGACGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATCGGGGCATTTTTCCTAGATTCTTCAGTAGCACTCCTGTCAGAAA
GGCTAGGCTCCCAAATGAAAATCCCAAAACAGGATTCAACGGATAACACATTGGAGTCTGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCTGGAACA
ATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAATGAAGGTTACCAAGATGGTAGTTGGGAGTATCAGATTGTAGGTTCTCATGATATCAGGAAGCCTACAGA
GTCGGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGAAAGACTCTTCAACCTCAGGAGTTCACGTGAAATACCAGGCCATGAGAGCCGGAGCAAAGGGAGAGGTGGTTT
CTATCAGAATTTCTCAGCAGCTTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGAAACTGAGCATTGCCTCAGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGCAAAAATGTTGAAGCGATCATCGCCAAATTCAGT
TGTTGCTGCAGAGCCGGAAGGATTGGTAAAGCGAATGCGAAGGGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGCGCATTCTTCTGCTT
CATCCTCTGCATCTTCGTCTTCCTGCTGGTACGACGCGGACGTTTGGACAGAGGTTGCGAAGTTTCTGGATGGAAAATCTTTGATGATGCTTGCGGCGACTAGCCGGTGG
TTTTATCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTCCAGGTCCCTGCCCCTCAACATACGGCCTTCAAATGGATCAAACTTTACGTTTC
TGCCTTCGACGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATCGGGGCATTTTTCCTAGATTCTTCAGTAGCACTCCTGTCAGAAA
GGCTAGGCTCCCAAATGAAAATCCCAAAACAGGATTCAACGGATAACACATTGGAGTCTGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCTGGAACA
ATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAATGAAGGTTACCAAGATGGTAGTTGGGAGTATCAGATTGTAGGTTCTCATGATATCAGGAAGCCTACAGA
GTCGGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGAAAGACTCTTCAACCTCAGGAGTTCACGTGAAATACCAGGCCATGAGAGCCGGAGCAAAGGGAGAGGTGGTTT
CTATCAGAATTTCTCAGCAGCTTCTTTAGTTCCTTCTTTTATTATTCCTTCTTCTTCAACCCCAAACAAAACTAAACTCACTATACTTTGAGCCAAATAAGTATAAATAC
CAACCAAAAACAAAACCAAATAACCATTTTTCAAATTAATACTTTTACTTTGTAACCTTTCTCATTAACAAGTTATGTTTCAAATCA
Protein sequenceShow/hide protein sequence
MGKKLSIASARDRVVTRSQSIAMERAKMLKRSSPNSVVAAEPEGLVKRMRRDIKPIHSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGKSLMMLAATSRW
FYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIAGT
MQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGVHVKYQAMRAGAKGEVVSIRISQQLL