CuGenDBv2

Gene ID	Lsi09G019140
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	MADS-box protein SOC1-like
Genome location	chr09:27979417..27992150
RNA-Seq Expression	Lsi09G019140
Synteny	Lsi09G019140
Gene Ontology terms	GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process) GO:0005634 - nucleus (cellular component) GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR002100 - Transcription factor, MADS-box IPR002487 - Transcription factor, K-box IPR033896 - MADS MEF2-like IPR036879 - Transcription factor, MADS-box superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6593700.1 MADS-box protein SOC1, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-81

68.42

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFA+S +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD
          +AT++RYRKHAKTKEALDPPSVN +QLEHLNHEEAA+LM KIE+LEVSKRKMLGEDLGSCS+DELQQ+E QLEKSV KIRARK+EVFEEQIKQL+ K+
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD

Query:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH
                   E+WESE +GGV   E ER   L+NYAESSSPSSEVETELFIGPPE RPR FLSL+
Subjt:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH

KAG7026039.1 MADS-box protein SOC1, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.3e-82

70.16

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFA+S +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD
          +AT++RYRKHAKTKEALDPPSVN +QLEHLNHEEAA+LM KIE+LEVSKRKMLGEDLGSCS+DELQQ+E QLEKSV KIRARK+EVFEEQIKQL+ K 
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD

Query:  FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH
             WESE +GGV   E ER   L+NYAESSSPSSEVETELFIGPPE RPR FLSL+
Subjt:  FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH

XP_008460142.1 PREDICTED: MADS-box protein SOC1-like [Cucumis melo]

2.2e-81

70.52

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSV-NIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQK
          +ATI+RYRK AKTKEALDPP V NIVQLEH NHEEAASL+ KIE+LEVSKRKMLGEDLGSCS+DELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQK
Subjt:  LSEATIDRYRKHAKTKEALDPPSV-NIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQK

Query:  DFYGEE--------WESE-GDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH
        +   ++        WESE GDGGVNN  GE   K+LNYAESSSPSSEVETEL IGP    PRRFLS+H
Subjt:  DFYGEE--------WESE-GDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH

XP_038877327.1 MADS-box protein SOC1 isoform X1 [Benincasa hispida]

1.9e-85

68.2

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVN-----------------IVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRA
          + TI+RYRKHAK KEALDPPSVN                 I +LEHLNHEEAASLM  IE+LEV+KRKMLGEDLGSCS+DELQQLEHQLEKSV KIRA
Subjt:  LSEATIDRYRKHAKTKEALDPPSVN-----------------IVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRA

Query:  RKIEVFEEQIKQLRQKDFYGEE--------WESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH
        RKIEVFEEQIKQLRQK+   ++        WESEGDGGV NNEGER  K+LNYAESSSPSSEVETELFIGPPEA+PRRFLSLH
Subjt:  RKIEVFEEQIKQLRQKDFYGEE--------WESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH

XP_038877328.1 MADS-box protein SOC1 isoform X2 [Benincasa hispida]

2.4e-88

73.03

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSV-NIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQK
          + TI+RYRKHAK KEALDPPSV NIVQLEHLNHEEAASLM  IE+LEV+KRKMLGEDLGSCS+DELQQLEHQLEKSV KIRARKIEVFEEQIKQLRQK
Subjt:  LSEATIDRYRKHAKTKEALDPPSV-NIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQK

Query:  DFYGEE--------WESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH
        +   ++        WESEGDGGV NNEGER  K+LNYAESSSPSSEVETELFIGPPEA+PRRFLSLH
Subjt:  DFYGEE--------WESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CD40 MADS-box protein SOC1-like

1.0e-81

70.52

Show/hide

Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASS +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSV-NIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQK
          +ATI+RYRK AKTKEALDPP V NIVQLEH NHEEAASL+ KIE+LEVSKRKMLGEDLGSCS+DELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQK
Subjt:  LSEATIDRYRKHAKTKEALDPPSV-NIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQK

Query:  DFYGEE--------WESE-GDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH
        +   ++        WESE GDGGVNN  GE   K+LNYAESSSPSSEVETEL IGP    PRRFLS+H
Subjt:  DFYGEE--------WESE-GDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH

A0A6J1HK51 MADS-box protein SOC1 isoform X1

3.4e-80

67.67

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFA+S +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD
          +AT++RYRKHAKTKEALDPPSVN +QLEHLNHEEAA+LM KIE+LEVSKRKMLGEDLGSCS+DELQQ+E QLEKSV KIRARK+EVFEEQIKQL+ K+
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD

Query:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH
                   E+WESE +G     E ER   L+NYAESSSPSSEVETELFIGPPE RPR FLSL+
Subjt:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH

A0A6J1HMG1 MADS-box protein SOC1 isoform X2

1.3e-76

66.54

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFA+S +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD
          +AT++RYRKHAKTKEALDPPS     LEHLNHEEAA+LM KIE+LEVSKRKMLGEDLGSCS+DELQQ+E QLEKSV KIRARK+EVFEEQIKQL+ K+
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD

Query:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH
                   E+WESE +G     E ER   L+NYAESSSPSSEVETELFIGPPE RPR FLSL+
Subjt:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH

A0A6J1KBW9 MADS-box protein SOC1 isoform X1

1.2e-80

66.92

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFA+S +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD
          +AT++RYRKHAKTKEAL+PPSV+ +QLEHLNHE AA+LM KIE+LEVSKRKMLGEDLGSCS+DELQ++EHQLEKSV KIRARK+EVFEEQIKQL+ K+
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD

Query:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH
                   E+WESE +GGV   E ER   L+NY ESSSPSSEVETELFIGPPE RPR FLSL+
Subjt:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH

A0A6J1KKV3 MADS-box protein SOC1 isoform X2

1.2e-77

66.17

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFA+S +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD
          +AT++RYRKHAKTKEAL+PPS     LEHLNHE AA+LM KIE+LEVSKRKMLGEDLGSCS+DELQ++EHQLEKSV KIRARK+EVFEEQIKQL+ K+
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD

Query:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH
                   E+WESE +GGV   E ER   L+NY ESSSPSSEVETELFIGPPE RPR FLSL+
Subjt:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH

SwissProt top hits

e value

%identity

Alignment

O64645 MADS-box protein SOC1

3.2e-51

51.37

Show/hide

Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQM+ IENATSRQVTFSKRRNGL+KKAFELSVLCDAEV+LIIFSP+GKLYEFASS +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQK-
          + TIDRY +H K + +  P  V+   ++HL + EAA++M KIE+LE SKRK+LGE +G+CS++ELQQ+E QLEKSV  IRARK +VF+EQI+QL+QK 
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQK-

Query:  -------DFYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPP
               +   E+W S      +N   E  G+     E SSPSSEVET+LFIG P
Subjt:  -------DFYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPP

O82743 Agamous-like MADS-box protein AGL19

8.6e-41

42.64

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKT+M+ IENATSRQVTFSKRRNGL+KKAFELSVLCDAEVAL+IFSPR KLYEF+SS ++                                     
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD
           ATI+RY++  K        + N  Q      +E + L  KIE+LE+SKRK+LGE + +CS++ELQQLE+QL++S+S+IRA+K ++  E+I++L+ ++
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD

Query:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEAR
                   E+W   G   + +++       +N  +    + EVET LFIGPPE R
Subjt:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEAR

Q38838 Agamous-like MADS-box protein AGL14

3.1e-38

43.02

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKT+M+ IENATSRQVTFSKRRNGL+KKAFELSVLCDAEVALIIFSPRGKLYEF+SS                                    SS+ 
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD
            T++RY+K  +   +    + N  Q    + +E   L  KIE LE+S RKM+GE L + S++ELQQLE+QL++S+ KIRA+K ++  E+ ++L++K+
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD

Query:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEAR
                   E+ E +G G +           L+  ++     EV T+LFIGPPE R
Subjt:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEAR

Q9FIS1 MADS-box protein AGL42

1.3e-36

40.4

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGK +M+ IENATSRQVTFSKRRNGL+KKA+ELSVLCDA+++LIIFS RG+LYEF+SS +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPS-VNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQL--R
          + TI+RYRK+ K  E  +  S +++ QL+    +EA+ ++ KIE LE  KRK+LG+ + SCS++ELQ+++ QL++S+ K+R RK ++F+EQ+++L  +
Subjt:  LSEATIDRYRKHAKTKEALDPPS-VNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQL--R

Query:  QKDFYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPP
        +K    E  +      +N   G    +     +    + EVET+LFIG P
Subjt:  QKDFYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPP

Q9XJ60 MADS-box transcription factor 50

4.9e-36

42.58

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQM+ IEN TSRQVTFSKRRNGL+KKAFELSVLCDAEVALI+FSPRGKLYEFAS+                                        
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD
         ++ TI+RYR + K          +I Q++     +A  L  K+E LE  KRK+LGE L  CS++EL  LE +LE+S+  IR RK ++ EEQ+ +LR+K+
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD

Query:  FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSP---------SSEVETELFIGPP
            + ++E       N+      L   AE  +P         + +VETELFIG P
Subjt:  FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSP---------SSEVETELFIGPP

Arabidopsis top hits

e value

%identity

Alignment

AT2G45660.1 AGAMOUS-like 20

2.2e-52

51.37

Show/hide

Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKTQM+ IENATSRQVTFSKRRNGL+KKAFELSVLCDAEV+LIIFSP+GKLYEFASS +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQK-
          + TIDRY +H K + +  P  V+   ++HL + EAA++M KIE+LE SKRK+LGE +G+CS++ELQQ+E QLEKSV  IRARK +VF+EQI+QL+QK 
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQK-

Query:  -------DFYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPP
               +   E+W S      +N   E  G+     E SSPSSEVET+LFIG P
Subjt:  -------DFYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPP

AT4G11880.1 AGAMOUS-like 14

2.2e-39

43.02

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKT+M+ IENATSRQVTFSKRRNGL+KKAFELSVLCDAEVALIIFSPRGKLYEF+SS                                    SS+ 
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD
            T++RY+K  +   +    + N  Q    + +E   L  KIE LE+S RKM+GE L + S++ELQQLE+QL++S+ KIRA+K ++  E+ ++L++K+
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD

Query:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEAR
                   E+ E +G G +           L+  ++     EV T+LFIGPPE R
Subjt:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEAR

AT4G22950.1 AGAMOUS-like 19

6.1e-42

42.64

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGKT+M+ IENATSRQVTFSKRRNGL+KKAFELSVLCDAEVAL+IFSPR KLYEF+SS ++                                     
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD
           ATI+RY++  K        + N  Q      +E + L  KIE+LE+SKRK+LGE + +CS++ELQQLE+QL++S+S+IRA+K ++  E+I++L+ ++
Subjt:  LSEATIDRYRKHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKD

Query:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEAR
                   E+W   G   + +++       +N  +    + EVET LFIGPPE R
Subjt:  --------FYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPPEAR

AT5G62165.1 AGAMOUS-like 42

9.2e-38

40.4

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGK +M+ IENATSRQVTFSKRRNGL+KKA+ELSVLCDA+++LIIFS RG+LYEF+SS +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPS-VNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQL--R
          + TI+RYRK+ K  E  +  S +++ QL+    +EA+ ++ KIE LE  KRK+LG+ + SCS++ELQ+++ QL++S+ K+R RK ++F+EQ+++L  +
Subjt:  LSEATIDRYRKHAKTKEALDPPS-VNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQL--R

Query:  QKDFYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPP
        +K    E  +      +N   G    +     +    + EVET+LFIG P
Subjt:  QKDFYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPP

AT5G62165.2 AGAMOUS-like 42

9.2e-38

40.4

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Query:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ
        MVRGK +M+ IENATSRQVTFSKRRNGL+KKA+ELSVLCDA+++LIIFS RG+LYEF+SS +                                      
Subjt:  MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQ

Query:  LSEATIDRYRKHAKTKEALDPPS-VNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQL--R
          + TI+RYRK+ K  E  +  S +++ QL+    +EA+ ++ KIE LE  KRK+LG+ + SCS++ELQ+++ QL++S+ K+R RK ++F+EQ+++L  +
Subjt:  LSEATIDRYRKHAKTKEALDPPS-VNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQL--R

Query:  QKDFYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPP
        +K    E  +      +N   G    +     +    + EVET+LFIG P
Subjt:  QKDFYGEEWESEGDGGVNNNEGEREGKLLNYAESSSPSSEVETELFIGPP

Sequences

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CDS sequence

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ATGGTGAGAGGAAAGACGCAGATGAGGCTAATAGAGAACGCTACAAGCCGGCAAGTCACCTTCTCCAAGAGGCGAAATGGTTTGATGAAAAAAGCTTTTGAGCTATCAGT
TCTCTGTGATGCTGAGGTTGCTCTTATCATCTTCTCCCCTAGAGGAAAGCTTTATGAATTTGCTAGCTCAAGGTTATCTTCCTATGATGAAGAAGATTGTTGCATGCATA
AAAAATCCTGCGAATCCCCTTATTATCACTGCTTCCAAAGTCGAAGGAACAGTCGATTGGACGAGACAAGCTCTGTCCAACTCTCCGAAGCAACTATAGATCGTTACCGA
AAGCATGCAAAAACAAAAGAAGCCCTGGATCCTCCATCTGTTAATATTGTACAGTTGGAGCATCTGAATCATGAAGAAGCAGCTAGCCTGATGAATAAGATAGAGAAACT
TGAAGTTTCAAAACGGAAAATGTTGGGAGAAGATCTGGGATCTTGCTCCATGGATGAACTTCAACAGCTTGAACATCAGTTGGAGAAAAGTGTTTCCAAAATTAGAGCCA
GAAAGATAGAAGTGTTTGAAGAACAGATTAAACAACTAAGGCAAAAGGATTTCTATGGGGAAGAATGGGAAAGTGAGGGAGATGGAGGAGTAAATAATAATGAAGGAGAA
AGAGAAGGGAAATTGTTAAACTATGCAGAAAGTAGCAGCCCAAGTTCAGAGGTGGAGACTGAATTGTTCATTGGGCCACCTGAAGCAAGGCCCCGACGATTTCTTTCCCT
TCACTGA

mRNA sequence

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AAACAAACACACAGTGTACGGACAAAACCCTCTCAATTCTAATGTTTCCATTTGTAAACAATATGAAAGCAAATTCCCCTATTTCACTTTCCTTTTCCAATCTGACTTTC
CCTCAAATTCCAATTCCCATTTTCCATTTCTTTCTCTGTTTGTTGTGATTGTGATTCTTCTCCCTCCCTCCCTTTCTCTTTATCTTTTTCTCTCTCTCTCTTTTTTTTTT
CCTAAACAAGAAACTTGCAATTTGGATGGATATCATCTCCCTTTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCTTAACTTTGTTTTTGGCTGCTACTACTTAACT
TTGTTTACTTCCCTTTGAATTTTCAAACTCTCCTTTTCTAAATATTCCCCATTCTTTCCCTTTTCTAGCTAATTTTCTAAACTGGGTTTCAAAGTAACAACCCAATCAAA
CCAATCCAATATTGCTTCTGTCTTCTCTCTGTGTTGTTGGTGTTTTAATTTCTTCTCATCATGTCTCCACTTCATCAACCACAACACCCCTCTTCCCTCTTCTTTTCAAC
TTTTTGTTTAGATTAGTTCTGCCTTTTGCTTCTATTTCAAGATTTTGCTTTTTTTTTTTCTTTTTTTTTTTTGGTTGGTTTTAGCAAAGGGGAGAGGGAGATTGGAGCTT
GTGGTCCTTACACTCCTTGCTTGTTAATTTCTTCATCTTGTGGCCTTGGATTTTTCTTCTCCTCTTTCCCAATTTCTCATCTCTTTTTCCTTCTTTTATAACTCTCACTC
TGGTTTCACTATGCTTCCCCATCTCCTTTTCTCTCTGTCTTGATCTATAAATTCATCACGCCTTTCTTTACCCATCTGGGTTTCTTGAGATCTATCGTCTCATATTCCTC
TACAACTCATTTTCTGTAATTACCACTCCAACTTTTCCCATCTCTGCGGGATTTCCAAAAATGGTGAGAGGAAAGACGCAGATGAGGCTAATAGAGAACGCTACAAGCCG
GCAAGTCACCTTCTCCAAGAGGCGAAATGGTTTGATGAAAAAAGCTTTTGAGCTATCAGTTCTCTGTGATGCTGAGGTTGCTCTTATCATCTTCTCCCCTAGAGGAAAGC
TTTATGAATTTGCTAGCTCAAGGTTATCTTCCTATGATGAAGAAGATTGTTGCATGCATAAAAAATCCTGCGAATCCCCTTATTATCACTGCTTCCAAAGTCGAAGGAAC
AGTCGATTGGACGAGACAAGCTCTGTCCAACTCTCCGAAGCAACTATAGATCGTTACCGAAAGCATGCAAAAACAAAAGAAGCCCTGGATCCTCCATCTGTTAATATTGT
ACAGTTGGAGCATCTGAATCATGAAGAAGCAGCTAGCCTGATGAATAAGATAGAGAAACTTGAAGTTTCAAAACGGAAAATGTTGGGAGAAGATCTGGGATCTTGCTCCA
TGGATGAACTTCAACAGCTTGAACATCAGTTGGAGAAAAGTGTTTCCAAAATTAGAGCCAGAAAGATAGAAGTGTTTGAAGAACAGATTAAACAACTAAGGCAAAAGGAT
TTCTATGGGGAAGAATGGGAAAGTGAGGGAGATGGAGGAGTAAATAATAATGAAGGAGAAAGAGAAGGGAAATTGTTAAACTATGCAGAAAGTAGCAGCCCAAGTTCAGA
GGTGGAGACTGAATTGTTCATTGGGCCACCTGAAGCAAGGCCCCGACGATTTCTTTCCCTTCACTGATTCATTTCCATTAATATACCCTTACCCTAAACCCTTAATTAGT
AATTACAATCTCTAATATTACTTTTTATAATCTTATGTTAACAATCAATAATAACTCCTTTTCTATTCCAACTGAGAGAATCATATGAAAATTCTCTTTTCATTTTTCTT
TCTCTTTTTCCAGGCCAAAAAATAAAAATAAAAAAAAAATGGTTGTAAATAATTCTCATTTTCCATCTCTCTCCAAATGCCACTTGGTCTTCAACAATGATTCCCAACAT
TTTTATGATTTGTGCTTTGTTGATTACCTATGGACATCTATATAGTCGGTTCATAGTACAAGTCGTTCTTGCTAGTCGAACTGTGTCTGTGTTCGTGGTTCCCATCTAAA
CTGTATTTTTCTTTCTTTCTTTCTTTCTTATTTATCAATAAAAAAGTATTTTTAAAGTTATTAA

Protein sequence

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MVRGKTQMRLIENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFASSRLSSYDEEDCCMHKKSCESPYYHCFQSRRNSRLDETSSVQLSEATIDRYR
KHAKTKEALDPPSVNIVQLEHLNHEEAASLMNKIEKLEVSKRKMLGEDLGSCSMDELQQLEHQLEKSVSKIRARKIEVFEEQIKQLRQKDFYGEEWESEGDGGVNNNEGE
REGKLLNYAESSSPSSEVETELFIGPPEARPRRFLSLH

Lsi09G019140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome