; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G019210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G019210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTCP family transcription factor family protein
Genome locationchr09:28061652..28062668
RNA-Seq ExpressionLsi09G019210
SyntenyLsi09G019210
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008361 - regulation of cell size (biological process)
GO:0048364 - root development (biological process)
GO:1900056 - negative regulation of leaf senescence (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040018.1 transcription factor TCP9 [Cucumis melo var. makuwa]2.7e-14889.19Show/hide
Query:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQELDDDDDS PTHLRIN+S+SSR+DLLPL+PKQEHP   DSNLP     LL F  DI KT+SSLPPKR STKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYVDVNDALSVS+SASN    AG
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG

Query:  TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS
        +PAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF+APA P+INTTARPIS FPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS
Subjt:  TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS

Query:  SSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSR
        SS+V  +GKTTTQMLRDFSLEIYDKEELQFM+R
Subjt:  SSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSR

XP_004145050.1 transcription factor TCP9 [Cucumis sativus]2.5e-14688.17Show/hide
Query:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQELDDDDDS PTHLRIN+S+SSR+DLLPL+PKQEHP   DSNLP     LL F  DI KT+SSLPPKR STKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYVDVNDALSVS+SASN    AG
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG

Query:  TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS
        + AVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF+ PA PLINTTARPIS FPSK +TSHIQSSPTNQSSSTSSSSASKSQSVMAPIS
Subjt:  TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS

Query:  SSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH
        SS    +GKTTTQMLRDFSLEIYDKEELQFMS SSSKH
Subjt:  SSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH

XP_008460149.1 PREDICTED: transcription factor TCP9 [Cucumis melo]5.8e-15189.35Show/hide
Query:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQELDDDDDS PTHLRIN+S+SSR+DLLPL+PKQEHP   DSNLP     LL F  DI KT+SSLPPKR STKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYVDVNDALSVS+SASN    AG
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG

Query:  TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS
        +PAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF+APA P+INTTARPIS FPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS
Subjt:  TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS

Query:  SSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH
        SS+V  +GKTTTQMLRDFSLEIYDKEELQFM+RSSSKH
Subjt:  SSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH

XP_023515272.1 transcription factor TCP9 [Cucurbita pepo subsp. pepo]6.0e-14084.01Show/hide
Query:  MADIQKQEL--DDDDDSSPTHLRINESESSRIDLLPLSPKQEHP-DSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC
        MADIQKQE   DDD+DS  T LR+N+S+SSR+DLL L+PKQE P DS DS+LPPS IQ++ F  +IAKTVS LPPKRASTKDRHTKVEGRGRRIRIPATC
Subjt:  MADIQKQEL--DDDDDSSPTHLRINESESSRIDLLPLSPKQEHP-DSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC

Query:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVV
        AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSNQDSAD S  KKRRKRPANSDYVDVNDA+SVSV  SNGVV
Subjt:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVV

Query:  HAG---TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQS
        H+G   T AVQQA PPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF AP  PL+NTTARPIST  SK DTSHIQSS TNQSSS+SS+S SKS+S
Subjt:  HAG---TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQS

Query:  VMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH
        VMAPISSSTVPT+ KTTT+MLRDFSLEIYDK+ELQFMSRS+SKH
Subjt:  VMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH

XP_038876433.1 transcription factor TCP9 [Benincasa hispida]1.4e-15791.23Show/hide
Query:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR
        MADIQKQELDDDDDS  THL IN S+SSR+DLLPL PKQEHPDS  SNLPPSG+QLL FT DIAKTVS+LPPKRASTKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSS QDSADPSAAKKRRKRPANSDYVDV+ ALSVSVSASNGV+ AG
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG

Query:  T----PAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
        T    PAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF AP  PLI+TTARPISTF SKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
Subjt:  T----PAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM

Query:  APISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH
        APISSST  TTGKTTTQMLRDFSLEIY+KEELQFMSRSSSKH
Subjt:  APISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH

TrEMBL top hitse value%identityAlignment
A0A0A0KCU1 TCP domain-containing protein1.2e-14688.17Show/hide
Query:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQELDDDDDS PTHLRIN+S+SSR+DLLPL+PKQEHP   DSNLP     LL F  DI KT+SSLPPKR STKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYVDVNDALSVS+SASN    AG
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG

Query:  TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS
        + AVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF+ PA PLINTTARPIS FPSK +TSHIQSSPTNQSSSTSSSSASKSQSVMAPIS
Subjt:  TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS

Query:  SSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH
        SS    +GKTTTQMLRDFSLEIYDKEELQFMS SSSKH
Subjt:  SSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH

A0A1S3CBF3 transcription factor TCP92.8e-15189.35Show/hide
Query:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQELDDDDDS PTHLRIN+S+SSR+DLLPL+PKQEHP   DSNLP     LL F  DI KT+SSLPPKR STKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYVDVNDALSVS+SASN    AG
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG

Query:  TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS
        +PAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF+APA P+INTTARPIS FPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS
Subjt:  TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS

Query:  SSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH
        SS+V  +GKTTTQMLRDFSLEIYDKEELQFM+RSSSKH
Subjt:  SSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH

A0A5A7TAM9 Transcription factor TCP91.3e-14889.19Show/hide
Query:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQELDDDDDS PTHLRIN+S+SSR+DLLPL+PKQEHP   DSNLP     LL F  DI KT+SSLPPKR STKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYVDVNDALSVS+SASN    AG
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAG

Query:  TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS
        +PAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF+APA P+INTTARPIS FPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS
Subjt:  TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPIS

Query:  SSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSR
        SS+V  +GKTTTQMLRDFSLEIYDKEELQFM+R
Subjt:  SSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSR

A0A6J1HL63 transcription factor TCP96.5e-14084.01Show/hide
Query:  MADIQKQEL--DDDDDSSPTHLRINESESSRIDLLPLSPKQEHP-DSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC
        MADIQKQE   DDD+DS  T LR+N+S+SSR+DLL L+PKQE P DS DS+ PPS IQ++ F  +IAKTVS LPPKRASTKDRHTKVEGRGRRIRIPATC
Subjt:  MADIQKQEL--DDDDDSSPTHLRINESESSRIDLLPLSPKQEHP-DSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC

Query:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVV
        AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSNQDSAD SA KKRRKRPANSDYVDVNDA+SVSV  SNGVV
Subjt:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVV

Query:  HAG---TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQS
        H+G   T AVQQA PPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF AP  PL+NTTARPIST  SK DTSHIQSS TNQSSS+SS+S SKS+S
Subjt:  HAG---TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQS

Query:  VMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH
        VMAPISSSTVPT+ KTTT+MLRDFSLEIYDK+ELQFMSRS+SKH
Subjt:  VMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH

A0A6J1KE73 transcription factor TCP96.5e-14084.01Show/hide
Query:  MADIQKQEL--DDDDDSSPTHLRINESESSRIDLLPLSPKQEHP-DSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC
        MADIQKQE   DDD+DS  T LR+N+S+SSR+DLL L+PKQE P DS DS+LPPS IQ++ F  +IAKTVS LPPKRASTKDRHTKVEGRGRRIRIPATC
Subjt:  MADIQKQEL--DDDDDSSPTHLRINESESSRIDLLPLSPKQEHP-DSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC

Query:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVV
        AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSNQDSAD SA KKRRKRPANSDYVDVNDA+SVSV  SNGVV
Subjt:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVV

Query:  HAG---TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQS
        H+G   T AVQQA PPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF AP  PL+NTTARPIST  SK DTSHIQSS TNQSSS+SS+  SKS+S
Subjt:  HAG---TPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQS

Query:  VMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH
        VMAPISSSTVPT+ KTTT+MLRDFSLEIYDK+ELQFMSRS+SKH
Subjt:  VMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFMSRSSSKH

SwissProt top hitse value%identityAlignment
A2YXQ1 Transcription factor PCF24.3e-3243.41Show/hide
Query:  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSA------DP
        PP R   +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIAATGTGT+PAIA +V+G L+IPT +SSS+  ++      + 
Subjt:  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSA------DP

Query:  SAAKKRRK----------------RPANSDYVDVNDALSVSVSASNGVVHAGTPAVQQAFPPGFVPVWAIPS---------NAIIP--GAVFMVP---SV
        S+AK+RRK                 PA    V  +  L  S  A+  V     P      P G VPV+A+P+         N +IP   AV+MVP     
Subjt:  SAAKKRRK----------------RPANSDYVDVNDALSVSVSASNGVVHAGTPAVQQAFPPGFVPVWAIPS---------NAIIP--GAVFMVP---SV

Query:  ACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKS
        A +  +P  F     A  L+N      + FP+  + +  Q     Q  ST+    S S
Subjt:  ACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKS

O64647 Transcription factor TCP92.0e-6656.25Show/hide
Query:  FTADIAKTVSSLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSS
        F+  +A   S+ PP KRASTKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT++ 
Subjt:  FTADIAKTVSSLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSS

Query:  NQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVH-------------AGTPAVQQAFPPGFVPVWAIPSNAIIP--GAVFMVPSVACSSTRPQ
        +      +  KK+RKRP+NS+Y+D++DA    VSAS+G+               A +   QQ  P G  P+WAIPSNA+IP  GA F++P +A  S +PQ
Subjt:  NQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVH-------------AGTPAVQQAFPPGFVPVWAIPSNAIIP--GAVFMVPSVACSSTRPQ

Query:  LFSF-AAPATPLINTTA-RPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTTGK------TTTQMLRDFSLEIYDKEEL-QFMSR
        L +F AA A+P     A +  ST    P    + SS     S  S S+ S++ SVMAP SSS V TTG       TTT  LRDFSLEIY+K+EL QFMS 
Subjt:  LFSF-AAPATPLINTTA-RPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTTGK------TTTQMLRDFSLEIYDKEEL-QFMSR

Query:  SSSK
        ++++
Subjt:  SSSK

Q6ZBH6 Transcription factor PCF24.3e-3243.41Show/hide
Query:  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSA------DP
        PP R   +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIAATGTGT+PAIA +V+G L+IPT +SSS+  ++      + 
Subjt:  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSA------DP

Query:  SAAKKRRK----------------RPANSDYVDVNDALSVSVSASNGVVHAGTPAVQQAFPPGFVPVWAIPS---------NAIIP--GAVFMVP---SV
        S+AK+RRK                 PA    V  +  L  S  A+  V     P      P G VPV+A+P+         N +IP   AV+MVP     
Subjt:  SAAKKRRK----------------RPANSDYVDVNDALSVSVSASNGVVHAGTPAVQQAFPPGFVPVWAIPS---------NAIIP--GAVFMVP---SV

Query:  ACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKS
        A +  +P  F     A  L+N      + FP+  + +  Q     Q  ST+    S S
Subjt:  ACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKS

Q9C9L2 Transcription factor TCP153.1e-3053.96Show/hide
Query:  PDSDDSNLPPSGIQLLKFTADIAKTVSSL--------------PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA
        PD D ++ P   +QLL  +   + T  ++              PPKR STKDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEPA
Subjt:  PDSDDSNLPPSGIQLLKFTADIAKTVSSL--------------PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA

Query:  IIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA
        +IAATGTGTIPA   S+N +L+   ++ S+      PS+
Subjt:  IIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA

Q9LT89 Transcription factor TCP191.3e-4945.25Show/hide
Query:  SDDSNLPPSGIQLLKFTADIAKTVSSLP-PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAM
        SD +     G+ L+K      + V + P PKR ++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+
Subjt:  SDDSNLPPSGIQLLKFTADIAKTVSSLP-PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAM

Query:  SVNGTLKIPTTTSSSNQD--SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAGTPAVQ--QAFPPGFVPVWAIPSNAII-------PGAVFMV
        SVNGTLKIPT++   N      D    KKRRKR   SD+VDVND+   SV++    + A    V        GFVP W +              G ++ +
Subjt:  SVNGTLKIPTTTSSSNQD--SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAGTPAVQ--QAFPPGFVPVWAIPSNAII-------PGAVFMV

Query:  PSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFM
        P+VA                P +N  ARP+S++                      S+AS +++ M         T+G  TTQ LRDFSLEIYDK ELQF+
Subjt:  PSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFM

Query:  SRSSS
          S +
Subjt:  SRSSS

Arabidopsis top hitse value%identityAlignment
AT1G69690.1 TCP family transcription factor2.2e-3153.96Show/hide
Query:  PDSDDSNLPPSGIQLLKFTADIAKTVSSL--------------PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA
        PD D ++ P   +QLL  +   + T  ++              PPKR STKDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEPA
Subjt:  PDSDDSNLPPSGIQLLKFTADIAKTVSSL--------------PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA

Query:  IIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA
        +IAATGTGTIPA   S+N +L+   ++ S+      PS+
Subjt:  IIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA

AT2G45680.1 TCP family transcription factor1.5e-6756.25Show/hide
Query:  FTADIAKTVSSLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSS
        F+  +A   S+ PP KRASTKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT++ 
Subjt:  FTADIAKTVSSLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSS

Query:  NQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVH-------------AGTPAVQQAFPPGFVPVWAIPSNAIIP--GAVFMVPSVACSSTRPQ
        +      +  KK+RKRP+NS+Y+D++DA    VSAS+G+               A +   QQ  P G  P+WAIPSNA+IP  GA F++P +A  S +PQ
Subjt:  NQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVH-------------AGTPAVQQAFPPGFVPVWAIPSNAIIP--GAVFMVPSVACSSTRPQ

Query:  LFSF-AAPATPLINTTA-RPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTTGK------TTTQMLRDFSLEIYDKEEL-QFMSR
        L +F AA A+P     A +  ST    P    + SS     S  S S+ S++ SVMAP SSS V TTG       TTT  LRDFSLEIY+K+EL QFMS 
Subjt:  LFSF-AAPATPLINTTA-RPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTTGK------TTTQMLRDFSLEIYDKEEL-QFMSR

Query:  SSSK
        ++++
Subjt:  SSSK

AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 143.5e-2951.2Show/hide
Query:  KQELDDDDDSSPTHLRINESESSRIDL---LPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPP-KRASTKDRHTKVEGRGRRIRIPATCAARI
        K + DD+    P+      S SS   L     LS  Q    S  S    +  +LL+   + A   +  PP KRASTKDRHTKV+GRGRRIR+PA CAAR+
Subjt:  KQELDDDDDSSPTHLRINESESSRIDL---LPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPP-KRASTKDRHTKVEGRGRRIRIPATCAARI

Query:  FQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAA
        FQLTRELGHKSDGETI WLL++AEP++IAATGTGTIPA   S+N +L+  ++ SS +  S   SAA
Subjt:  FQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAA

AT5G51910.1 TCP family transcription factor9.5e-5145.25Show/hide
Query:  SDDSNLPPSGIQLLKFTADIAKTVSSLP-PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAM
        SD +     G+ L+K      + V + P PKR ++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+
Subjt:  SDDSNLPPSGIQLLKFTADIAKTVSSLP-PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAM

Query:  SVNGTLKIPTTTSSSNQD--SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAGTPAVQ--QAFPPGFVPVWAIPSNAII-------PGAVFMV
        SVNGTLKIPT++   N      D    KKRRKR   SD+VDVND+   SV++    + A    V        GFVP W +              G ++ +
Subjt:  SVNGTLKIPTTTSSSNQD--SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAGTPAVQ--QAFPPGFVPVWAIPSNAII-------PGAVFMV

Query:  PSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFM
        P+VA                P +N  ARP+S++                      S+AS +++ M         T+G  TTQ LRDFSLEIYDK ELQF+
Subjt:  PSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFM

Query:  SRSSS
          S +
Subjt:  SRSSS

AT5G51910.2 TCP family transcription factor9.5e-5145.25Show/hide
Query:  SDDSNLPPSGIQLLKFTADIAKTVSSLP-PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAM
        SD +     G+ L+K      + V + P PKR ++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+
Subjt:  SDDSNLPPSGIQLLKFTADIAKTVSSLP-PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAM

Query:  SVNGTLKIPTTTSSSNQD--SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAGTPAVQ--QAFPPGFVPVWAIPSNAII-------PGAVFMV
        SVNGTLKIPT++   N      D    KKRRKR   SD+VDVND+   SV++    + A    V        GFVP W +              G ++ +
Subjt:  SVNGTLKIPTTTSSSNQD--SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAGTPAVQ--QAFPPGFVPVWAIPSNAII-------PGAVFMV

Query:  PSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFM
        P+VA                P +N  ARP+S++                      S+AS +++ M         T+G  TTQ LRDFSLEIYDK ELQF+
Subjt:  PSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQFM

Query:  SRSSS
          S +
Subjt:  SRSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATATTCAGAAACAAGAACTCGACGACGACGACGACTCTTCCCCCACCCATCTCCGCATCAATGAATCCGAATCCTCTCGAATCGACCTTCTTCCTCTTTCTCC
CAAGCAGGAGCATCCCGATTCCGACGACTCCAACCTCCCGCCCTCCGGAATTCAGCTCCTCAAGTTCACTGCAGACATTGCTAAAACCGTCTCATCTCTCCCGCCCAAGA
GAGCCTCCACCAAGGATCGCCACACCAAAGTCGAGGGCAGAGGCCGGAGAATCCGAATTCCGGCAACCTGTGCCGCCCGTATCTTCCAGTTGACTCGAGAGCTTGGCCAC
AAGTCCGACGGCGAAACTATCCGCTGGCTTCTCGAGCGGGCCGAGCCGGCCATCATCGCTGCTACTGGGACTGGTACAATTCCCGCCATCGCCATGTCTGTTAATGGCAC
TCTCAAAATCCCCACCACCACTTCCTCTTCTAATCAAGATTCCGCCGATCCTTCCGCCGCTAAGAAGCGCCGTAAGCGTCCCGCTAACAGTGACTACGTTGACGTAAACG
ACGCCCTCTCCGTCTCCGTTTCCGCCTCGAACGGCGTCGTTCATGCCGGTACCCCCGCCGTCCAACAGGCTTTTCCACCGGGGTTCGTTCCAGTGTGGGCCATCCCATCG
AACGCCATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGCATGTTCTTCCACCCGTCCACAGTTGTTCTCATTTGCAGCTCCCGCGACGCCGCTCATCAACACGAC
GGCGCGGCCCATTTCCACCTTCCCGTCGAAGCCAGACACGTCTCACATTCAATCCAGCCCCACCAATCAAAGCTCTAGCACTTCAAGCTCCTCCGCTTCCAAGTCTCAAT
CCGTCATGGCGCCGATCTCGAGCTCCACCGTCCCGACGACCGGAAAAACAACGACGCAGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGGAAGAGCTTCAATTC
ATGTCTCGCTCGTCCTCAAAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATATTCAGAAACAAGAACTCGACGACGACGACGACTCTTCCCCCACCCATCTCCGCATCAATGAATCCGAATCCTCTCGAATCGACCTTCTTCCTCTTTCTCC
CAAGCAGGAGCATCCCGATTCCGACGACTCCAACCTCCCGCCCTCCGGAATTCAGCTCCTCAAGTTCACTGCAGACATTGCTAAAACCGTCTCATCTCTCCCGCCCAAGA
GAGCCTCCACCAAGGATCGCCACACCAAAGTCGAGGGCAGAGGCCGGAGAATCCGAATTCCGGCAACCTGTGCCGCCCGTATCTTCCAGTTGACTCGAGAGCTTGGCCAC
AAGTCCGACGGCGAAACTATCCGCTGGCTTCTCGAGCGGGCCGAGCCGGCCATCATCGCTGCTACTGGGACTGGTACAATTCCCGCCATCGCCATGTCTGTTAATGGCAC
TCTCAAAATCCCCACCACCACTTCCTCTTCTAATCAAGATTCCGCCGATCCTTCCGCCGCTAAGAAGCGCCGTAAGCGTCCCGCTAACAGTGACTACGTTGACGTAAACG
ACGCCCTCTCCGTCTCCGTTTCCGCCTCGAACGGCGTCGTTCATGCCGGTACCCCCGCCGTCCAACAGGCTTTTCCACCGGGGTTCGTTCCAGTGTGGGCCATCCCATCG
AACGCCATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGCATGTTCTTCCACCCGTCCACAGTTGTTCTCATTTGCAGCTCCCGCGACGCCGCTCATCAACACGAC
GGCGCGGCCCATTTCCACCTTCCCGTCGAAGCCAGACACGTCTCACATTCAATCCAGCCCCACCAATCAAAGCTCTAGCACTTCAAGCTCCTCCGCTTCCAAGTCTCAAT
CCGTCATGGCGCCGATCTCGAGCTCCACCGTCCCGACGACCGGAAAAACAACGACGCAGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGGAAGAGCTTCAATTC
ATGTCTCGCTCGTCCTCAAAACATTGA
Protein sequenceShow/hide protein sequence
MADIQKQELDDDDDSSPTHLRINESESSRIDLLPLSPKQEHPDSDDSNLPPSGIQLLKFTADIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGH
KSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVHAGTPAVQQAFPPGFVPVWAIPS
NAIIPGAVFMVPSVACSSTRPQLFSFAAPATPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTTGKTTTQMLRDFSLEIYDKEELQF
MSRSSSKH