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Lsi09G019230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G019230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLOW protein: cytochrome C biogenesis ccmF-like protein
Genome locationchr09:28073232..28073631
RNA-Seq ExpressionLsi09G019230
SyntenyLsi09G019230
Gene Ontology termsGO:0017004 - cytochrome complex assembly (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABF59341.1 unknown protein [Arabidopsis thaliana]2.2e-1052.33Show/hide
Query:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT
        GSGIDWFRADS SCCLDYRRIRG V   LG + T                        Q      RLPTRARSSIGG+  WSGGKT
Subjt:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT

ABK28030.1 unknown, partial [Arabidopsis thaliana]2.2e-1052.33Show/hide
Query:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT
        GSGIDWFRADS SCCLDYRRIRG V   LG + T                        Q      RLPTRARSSIGG+  WSGGKT
Subjt:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT

CAA0413853.1 unnamed protein product [Arabidopsis thaliana]2.2e-1052.33Show/hide
Query:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT
        GSGIDWFRADS SCCLDYRRIRG V   LG + T                        Q      RLPTRARSSIGG+  WSGGKT
Subjt:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT

KJB09784.1 hypothetical protein B456_001G165700 [Gossypium raimondii]4.3e-1453.06Show/hide
Query:  WLANANREGRTNGSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSR--------LPTRARSSIGGR
        WLANANREGRTNG G+DWFRADSWSCCLDYRRIRG   L  G   T       R +H         +  ++P L  +R        LPTRARSSIGG+
Subjt:  WLANANREGRTNGSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSR--------LPTRARSSIGGR

NP_001118286.2 LOW protein: cytochrome C biogenesis ccmF-like protein [Arabidopsis thaliana]2.2e-1052.33Show/hide
Query:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT
        GSGIDWFRADS SCCLDYRRIRG V   LG + T                        Q      RLPTRARSSIGG+  WSGGKT
Subjt:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT

TrEMBL top hitse value%identityAlignment
A0A0D2PSG0 Uncharacterized protein2.1e-1453.06Show/hide
Query:  WLANANREGRTNGSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSR--------LPTRARSSIGGR
        WLANANREGRTNG G+DWFRADSWSCCLDYRRIRG   L  G   T       R +H         +  ++P L  +R        LPTRARSSIGG+
Subjt:  WLANANREGRTNGSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSR--------LPTRARSSIGGR

A0A654GFA0 Uncharacterized protein1.1e-1052.33Show/hide
Query:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT
        GSGIDWFRADS SCCLDYRRIRG V   LG + T                        Q      RLPTRARSSIGG+  WSGGKT
Subjt:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT

A0A654GFS6 Uncharacterized protein1.1e-1052.33Show/hide
Query:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT
        GSGIDWFRADS SCCLDYRRIRG V   LG + T                        Q      RLPTRARSSIGG+  WSGGKT
Subjt:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT

A0MDQ3 Uncharacterized protein (Fragment)1.1e-1052.33Show/hide
Query:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT
        GSGIDWFRADS SCCLDYRRIRG V   LG + T                        Q      RLPTRARSSIGG+  WSGGKT
Subjt:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT

F4IMD2 LOW protein: cytochrome C biogenesis ccmF-like protein1.1e-1052.33Show/hide
Query:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT
        GSGIDWFRADS SCCLDYRRIRG V   LG + T                        Q      RLPTRARSSIGG+  WSGGKT
Subjt:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G07815.1 BEST Arabidopsis thaliana protein match is: cytochrome C biogenesis 452 (TAIR:ATMG00180.1)2.1e-1452.33Show/hide
Query:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT
        GSGIDWFRADS SCCLDYRRIRG V   LG + T                        Q      RLPTRARSSIGG+  WSGGKT
Subjt:  GSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGCTGGCAAACGCCAACCGAGAGGGGAGAACGAATGGCTCAGGAATCGACTGGTTCCGAGCGGACTCATGGAGCTGCTGCTTGGATTATCGTAGAATAAGAGGATTTGT
CTTTCTTAGCTTAGGAAATGACTTCACTTTAAAGACCGCCGCTGGGAGGCGAGGGAGTCACTTGTCTGGGGGCGGCCGGAGATTGATTGAAAAGGCAGCCCAGCCGCCCC
TCCCCCCTAGCCGCCTACCTACTCGTGCTCGTAGCTCGATCGGAGGTCGACGAGTGTGGTCCGGCGGAAAAACATAA
mRNA sequenceShow/hide mRNA sequence
TGGCTGGCAAACGCCAACCGAGAGGGGAGAACGAATGGCTCAGGAATCGACTGGTTCCGAGCGGACTCATGGAGCTGCTGCTTGGATTATCGTAGAATAAGAGGATTTGT
CTTTCTTAGCTTAGGAAATGACTTCACTTTAAAGACCGCCGCTGGGAGGCGAGGGAGTCACTTGTCTGGGGGCGGCCGGAGATTGATTGAAAAGGCAGCCCAGCCGCCCC
TCCCCCCTAGCCGCCTACCTACTCGTGCTCGTAGCTCGATCGGAGGTCGACGAGTGTGGTCCGGCGGAAAAACATAA
Protein sequenceShow/hide protein sequence
WLANANREGRTNGSGIDWFRADSWSCCLDYRRIRGFVFLSLGNDFTLKTAAGRRGSHLSGGGRRLIEKAAQPPLPPSRLPTRARSSIGGRRVWSGGKT