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Lsi09G019340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G019340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationchr09:28141131..28141559
RNA-Seq ExpressionLsi09G019340
SyntenyLsi09G019340
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsIPR000757 - Glycoside hydrolase family 16
IPR008264 - Beta-glucanase
IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1214450.1 putative xyloglucan endotransglucosylase/hydrolase protein 27 [Morella rubra]1.8e-6175.35Show/hide
Query:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIP
        I+CPAGNTSGLNFN+YLSS+EG+K QDEIDFEFLGKDR+IVQTN YT G GNRE IH+LGFDC DGFH+Y +KWGP+ +EW+I+GKVVRREE    E+ P
Subjt:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIP

Query:  RKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP
         K MFLYAS+WDAS IDEGRWAGKYVGC+ PYVC+YKD++VP
Subjt:  RKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP

XP_010092731.1 probable xyloglucan endotransglucosylase/hydrolase protein 27 [Morus notabilis]3.0e-6174.65Show/hide
Query:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIP
        I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKDR++VQTN+YT G GNRE+IH LGFDC DGFH+Y +KWGPDL+EW I+GKVVRREE    E  P
Subjt:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIP

Query:  RKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP
         K MFLYAS+WDAS IDEGRW GKYVGC+ PYVC+YKD+ VP
Subjt:  RKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP

XP_015900194.1 uncharacterized protein LOC107433420 isoform X1 [Ziziphus jujuba]2.2e-5972.73Show/hide
Query:  MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDI
        +I+CP GNTSGLNFN+YLSSMEG+K QDEIDFEFLG+DR++VQTN YT G GNRE+IH+LGFDC DGFH+Y +KWGPDL+EW I+GKVVR+EE    E  
Subjt:  MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDI

Query:  PRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP
        P K M+LYAS+WDAS IDEGRW GKY GC+ PYVC+YKDV VP
Subjt:  PRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP

XP_018807447.1 probable xyloglucan endotransglucosylase/hydrolase protein 27 [Juglans regia]2.9e-5973.43Show/hide
Query:  MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDI
        +I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKDR+IVQTN YT G GNRE IH+LGFDC DGFH+Y +KWGP+ +EW I+GK VRREE    E  
Subjt:  MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDI

Query:  PRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP
        P K MFLYAS+WDAS IDEGRW GKYVGC+ PYVCVYKD++VP
Subjt:  PRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP

XP_038876437.1 beta-glucanase-like [Benincasa hispida]1.0e-6986.33Show/hide
Query:  MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKA
        MIRCP GNTSGLNFNLYLSS+EGEKGQDEIDFEFLGKDRS+VQTN YTGG GNRE+IHELGFDCGDGFHKYSVKW  DL+EW ++G VVRR  EDIPRKA
Subjt:  MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKA

Query:  MFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP
        M+LYASMWDAS+IDEGRWAGKYVGC+QPYVCVYKD+QVP
Subjt:  MFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP

TrEMBL top hitse value%identityAlignment
A0A2I4DJZ1 probable xyloglucan endotransglucosylase/hydrolase protein 271.4e-5973.43Show/hide
Query:  MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDI
        +I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKDR+IVQTN YT G GNRE IH+LGFDC DGFH+Y +KWGP+ +EW I+GK VRREE    E  
Subjt:  MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDI

Query:  PRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP
        P K MFLYAS+WDAS IDEGRW GKYVGC+ PYVCVYKD++VP
Subjt:  PRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP

A0A2N9JA18 GH16 domain-containing protein2.6e-5872.03Show/hide
Query:  MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVV----RREEEDI
        +I+CP GNT+GLNFNLYLSS+EG+K QDEIDFEFLGKD++IVQTN YT G GNRE IH+LGFDC DGFH+Y +KWG D + W I+GKVV    R+E ED 
Subjt:  MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVV----RREEEDI

Query:  PRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP
        P K MFLYAS+WDAS IDEGRW GKYVGC+ PYVCVYKD+ VP
Subjt:  PRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP

A0A6A1VUX7 Putative xyloglucan endotransglucosylase/hydrolase protein 278.6e-6275.35Show/hide
Query:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIP
        I+CPAGNTSGLNFN+YLSS+EG+K QDEIDFEFLGKDR+IVQTN YT G GNRE IH+LGFDC DGFH+Y +KWGP+ +EW+I+GKVVRREE    E+ P
Subjt:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIP

Query:  RKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP
         K MFLYAS+WDAS IDEGRWAGKYVGC+ PYVC+YKD++VP
Subjt:  RKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP

A0A6P4AWE8 uncharacterized protein LOC107433420 isoform X11.1e-5972.73Show/hide
Query:  MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDI
        +I+CP GNTSGLNFN+YLSSMEG+K QDEIDFEFLG+DR++VQTN YT G GNRE+IH+LGFDC DGFH+Y +KWGPDL+EW I+GKVVR+EE    E  
Subjt:  MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDI

Query:  PRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP
        P K M+LYAS+WDAS IDEGRW GKY GC+ PYVC+YKDV VP
Subjt:  PRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP

W9RDT3 Putative xyloglucan endotransglucosylase/hydrolase protein 271.5e-6174.65Show/hide
Query:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIP
        I+CP GNTSGLNFN+YLSS+EG+K QDEIDFEFLGKDR++VQTN+YT G GNRE+IH LGFDC DGFH+Y +KWGPDL+EW I+GKVVRREE    E  P
Subjt:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREE----EDIP

Query:  RKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP
         K MFLYAS+WDAS IDEGRW GKYVGC+ PYVC+YKD+ VP
Subjt:  RKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQVP

SwissProt top hitse value%identityAlignment
P04957 Beta-glucanase2.7e-2038.89Show/hide
Query:  PAGNTSGL-NFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFL
        PA NT  + +F  Y    +G    DEID EFLGKD + VQ N YT GAGN E+I +LGFD  + +H Y+  W P+ ++W ++G++       IP     +
Subjt:  PAGNTSGL-NFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFL

Query:  YASMWDASNIDEGRWAGKYVGCNQPY
          ++W+ + +DE  W G Y G N  Y
Subjt:  YASMWDASNIDEGRWAGKYVGCNQPY

P07980 Beta-glucanase7.9e-2038.1Show/hide
Query:  PAGNTSGL-NFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFL
        PA NT  + +F  Y    EG    DEID EFLGKD + VQ N YT GAGN E+  +LGFD  + +H Y+  W P+ ++W ++G++       IP     +
Subjt:  PAGNTSGL-NFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFL

Query:  YASMWDASNIDEGRWAGKYVGCNQPY
          ++W+ + +D+  W G Y G N  Y
Subjt:  YASMWDASNIDEGRWAGKYVGCNQPY

P23904 Beta-glucanase6.7e-1937.3Show/hide
Query:  PAGNTSGL-NFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFL
        PA NT  + +F  Y     G +  DEID EFLGKD + VQ N YT G G  E++  LGFD   GFH Y+  W P  ++W ++G +      +IP     +
Subjt:  PAGNTSGL-NFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFL

Query:  YASMWDASNIDEGRWAGKYVGCNQPY
          ++W+ + +D+  W G Y G N  Y
Subjt:  YASMWDASNIDEGRWAGKYVGCNQPY

P27051 Beta-glucanase3.3e-1840.21Show/hide
Query:  DEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFLYASMWDASNIDEGRWAGKYVG
        DEID EFLGKD + VQ N YT G GN E+I  LGFD  + +H Y+  W P+ ++W ++G++       IP+    +  ++W+ + +DE  W G Y G
Subjt:  DEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFLYASMWDASNIDEGRWAGKYVG

P45797 Beta-glucanase4.3e-1837.3Show/hide
Query:  PAGNTSGL-NFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFL
        PA NT  + +F  Y     G +  DEID EFLGKD + VQ N YT G G  E+I  LGFD    FH Y+  W P  ++W ++G +      +IP     +
Subjt:  PAGNTSGL-NFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFL

Query:  YASMWDASNIDEGRWAGKYVGCNQPY
          ++W+ + +D   W G Y G N  Y
Subjt:  YASMWDASNIDEGRWAGKYVGCNQPY

Arabidopsis top hitse value%identityAlignment
AT1G11545.1 xyloglucan endotransglucosylase/hydrolase 81.0e-1431.33Show/hide
Query:  IRCPAGNTSGLNFNLYLSSMEGE-KGQDEIDFEFLGKDRS---IVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVR--REEED
        ++   G+++G+    Y+ S  G    +DEIDFEFLG       I+QTN+Y  G GNRE  H L FD    +H YS+ W    + + ++   +R  +  + 
Subjt:  IRCPAGNTSGLNFNLYLSSMEGE-KGQDEIDFEFLGKDRS---IVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVR--REEED

Query:  IP-------RKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQV
        +P       +K M+L++S+W+A +        K      P+V  YKD  V
Subjt:  IP-------RKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQV

AT2G06850.1 xyloglucan endotransglucosylase/hydrolase 41.7e-1734.64Show/hide
Query:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGK---DRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVR--REEEDI
        I+ PAG+T+G+    YLSS   E   DEIDFEFLG      +I+QTN++TGG GNRE+   L FD    +H YS+ W    + + ++   +R  +  +D+
Subjt:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGK---DRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVR--REEEDI

Query:  P-----RKAMFLYASMWDASN------IDEGRWAGKYVGCNQPYVCVYKDVQV
               + M LY+S+W+A +      +++  WA      N P+V  YK   +
Subjt:  P-----RKAMFLYASMWDASN------IDEGRWAGKYVGCNQPYVCVYKDVQV

AT2G18800.1 xyloglucan endotransglucosylase/hydrolase 212.7e-1533.33Show/hide
Query:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGK---DRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEE----
        I+   GN++G     YL S       DEIDFEFLG    D  IV TN+YT G G+RE+   L FD    FH YS+ W P  + + I+GK +R  +     
Subjt:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGK---DRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEE----

Query:  --DIPR-KAMFLYASMWDA-----------SNIDEGRWAGKYVGCNQPYVCVYKDV
            P+ + M +Y S+W+A           +N  +G +   ++  N    CV+  V
Subjt:  --DIPR-KAMFLYASMWDA-----------SNIDEGRWAGKYVGCNQPYVCVYKDV

AT3G25050.1 xyloglucan endotransglucosylase/hydrolase 31.0e-1432.62Show/hide
Query:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRS---IVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVR--REEEDI
        I+ P+GNT G+    YL+S  G  G DEIDFEFLG +      +QTNL+  G GNRE    L F+    +H Y + W P  + + ++   +R  + E  +
Subjt:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRS---IVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVR--REEEDI

Query:  --PRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKD
          P K M + AS+W+  +        K      P++  ++D
Subjt:  --PRKAMFLYASMWDASNIDEGRWAGKYVGCNQPYVCVYKD

AT5G13870.1 xyloglucan endotransglucosylase/hydrolase 52.7e-1534.69Show/hide
Query:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRS---IVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVR--REEEDI
        I+  AG+++G     YLSS   E   DEIDFEFLG       I+QTN++TGGAGNRE+   L FD    +H YSV W    + + ++   +R  +  +D+
Subjt:  IRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRS---IVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVR--REEEDI

Query:  PRKAMF-----LYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQV
          K  F     +Y+S+W+A +        K      P+V  Y+   V
Subjt:  PRKAMF-----LYASMWDASNIDEGRWAGKYVGCNQPYVCVYKDVQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCGATGCCCCGCCGGGAACACCTCCGGCCTCAATTTCAACCTCTACCTGTCGTCCATGGAAGGAGAGAAAGGGCAAGACGAAATCGACTTCGAATTCCTGGGAAA
GGACCGAAGCATCGTTCAGACGAATTTGTACACCGGGGGGGCCGGGAACAGAGAGCGAATCCACGAGCTTGGGTTCGATTGCGGAGATGGGTTCCATAAGTATTCGGTGA
AATGGGGGCCGGATTTGGTCGAGTGGGAGATCGAGGGGAAGGTGGTGCGACGGGAGGAGGAGGATATTCCGAGGAAGGCGATGTTTTTGTATGCGTCGATGTGGGATGCT
AGTAATATAGATGAAGGGAGGTGGGCAGGGAAGTATGTGGGATGTAATCAGCCATATGTTTGTGTTTATAAGGACGTTCAGGTTCCTCACCCTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCCGATGCCCCGCCGGGAACACCTCCGGCCTCAATTTCAACCTCTACCTGTCGTCCATGGAAGGAGAGAAAGGGCAAGACGAAATCGACTTCGAATTCCTGGGAAA
GGACCGAAGCATCGTTCAGACGAATTTGTACACCGGGGGGGCCGGGAACAGAGAGCGAATCCACGAGCTTGGGTTCGATTGCGGAGATGGGTTCCATAAGTATTCGGTGA
AATGGGGGCCGGATTTGGTCGAGTGGGAGATCGAGGGGAAGGTGGTGCGACGGGAGGAGGAGGATATTCCGAGGAAGGCGATGTTTTTGTATGCGTCGATGTGGGATGCT
AGTAATATAGATGAAGGGAGGTGGGCAGGGAAGTATGTGGGATGTAATCAGCCATATGTTTGTGTTTATAAGGACGTTCAGGTTCCTCACCCTCATTAA
Protein sequenceShow/hide protein sequence
MIRCPAGNTSGLNFNLYLSSMEGEKGQDEIDFEFLGKDRSIVQTNLYTGGAGNRERIHELGFDCGDGFHKYSVKWGPDLVEWEIEGKVVRREEEDIPRKAMFLYASMWDA
SNIDEGRWAGKYVGCNQPYVCVYKDVQVPHPH