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Lsi09G019360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G019360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:28146250..28150957
RNA-Seq ExpressionLsi09G019360
SyntenyLsi09G019360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA06793.1 hypothetical protein, partial [Cicer arietinum]4.8e-1045.83Show/hide
Query:  LTMDIISLIVIVTVDYDSRIWWHTFQPGRDSIVFIQIQFCNF------TNFFAPGVSISDSFFRYPIAPYDIISFLHFLLEESDPRHATAYFFAVF
        L + + ++I I+ + +D++   +TF        F+  +  NF       +F AP +SIS SF RYPIAPY+IISFLHFLLEE +PR  TAYFFA+F
Subjt:  LTMDIISLIVIVTVDYDSRIWWHTFQPGRDSIVFIQIQFCNF------TNFFAPGVSISDSFFRYPIAPYDIISFLHFLLEESDPRHATAYFFAVF

TrEMBL top hitse value%identityAlignment
A0A0A9I1C0 Uncharacterized protein9.0e-0755.22Show/hide
Query:  GMHSASPISFFISGELHTLQIAAAAACCAPSDPDLSTCTRRGRKPRDNRSSIETELTKFLNAPTTDS
        GM   SP + F+S E    QIAAA ACCAP DP LST T RG  P   R S ETE T+F +A T DS
Subjt:  GMHSASPISFFISGELHTLQIAAAAACCAPSDPDLSTCTRRGRKPRDNRSSIETELTKFLNAPTTDS

A0A7C9EJ66 Uncharacterized protein (Fragment)4.1e-1568.85Show/hide
Query:  NFFAPGVSISDSFFRYPIAPYDIISFLHFLLEESDPRHATAYFFAVFWGLGSSSWTRFGTL
        +F APG+SIS SFF+YPIAPY+ +SFLHFLL+E   RH TAYF AVF G GSS+WT+ GTL
Subjt:  NFFAPGVSISDSFFRYPIAPYDIISFLHFLLEESDPRHATAYFFAVFWGLGSSSWTRFGTL

A0A7C9ENX9 Uncharacterized protein (Fragment)4.1e-1568.85Show/hide
Query:  NFFAPGVSISDSFFRYPIAPYDIISFLHFLLEESDPRHATAYFFAVFWGLGSSSWTRFGTL
        +F APG+SIS SFF+YPIAPY+ +SFLHFLL+E   RH TAYF AVF G GSS+WT+ GTL
Subjt:  NFFAPGVSISDSFFRYPIAPYDIISFLHFLLEESDPRHATAYFFAVFWGLGSSSWTRFGTL

O65746 Uncharacterized protein (Fragment)2.3e-1045.83Show/hide
Query:  LTMDIISLIVIVTVDYDSRIWWHTFQPGRDSIVFIQIQFCNF------TNFFAPGVSISDSFFRYPIAPYDIISFLHFLLEESDPRHATAYFFAVF
        L + + ++I I+ + +D++   +TF        F+  +  NF       +F AP +SIS SF RYPIAPY+IISFLHFLLEE +PR  TAYFFA+F
Subjt:  LTMDIISLIVIVTVDYDSRIWWHTFQPGRDSIVFIQIQFCNF------TNFFAPGVSISDSFFRYPIAPYDIISFLHFLLEESDPRHATAYFFAVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAACAATGGACATAATTTCCTTAATCGTGATTGTGACCGTTGATTATGATAGCAGAATTTGGTGGCACACCTTCCAACCAGGTCGTGATTCAATCGTTTTTATCCA
AATCCAATTTTGTAATTTTACAAATTTCTTCGCGCCCGGTGTGTCCATCTCTGATAGCTTCTTCAGATACCCGATTGCCCCGTACGATATCATCAGCTTCTTGCATTTCC
TGCTCGAAGAGAGTGACCCGAGGCACGCAACGGCATACTTCTTCGCTGTGTTTTGGGGGCTTGGATCAAGCAGTTGGACAAGATTTGGGACACTCTTTTCATCCCTTTTG
ACTTCTCTGCAGTTCTGCGAGAGGGTCACAAGGCTTGAGATTGCCTGCGCTGCGACTTCTCGGACGCTGTTTGATTTGGCCTCGAGAAGTTTAATGAGGAGAGGTATGCA
CTCGGCTTCACCTATTAGCTTCTTCATCTCTGGTGAGCTGCATACCCTGCAGATTGCTGCTGCTGCTGCCTGCTGTGCACCAAGTGATCCCGACTTGAGCACGTGTACTA
GACGAGGGAGGAAGCCGAGAGACAACAGAAGTTCCATTGAAACTGAGCTGACTAAATTCCTCAATGCCCCGACCACGGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAACAATGGACATAATTTCCTTAATCGTGATTGTGACCGTTGATTATGATAGCAGAATTTGGTGGCACACCTTCCAACCAGGTCGTGATTCAATCGTTTTTATCCA
AATCCAATTTTGTAATTTTACAAATTTCTTCGCGCCCGGTGTGTCCATCTCTGATAGCTTCTTCAGATACCCGATTGCCCCGTACGATATCATCAGCTTCTTGCATTTCC
TGCTCGAAGAGAGTGACCCGAGGCACGCAACGGCATACTTCTTCGCTGTGTTTTGGGGGCTTGGATCAAGCAGTTGGACAAGATTTGGGACACTCTTTTCATCCCTTTTG
ACTTCTCTGCAGTTCTGCGAGAGGGTCACAAGGCTTGAGATTGCCTGCGCTGCGACTTCTCGGACGCTGTTTGATTTGGCCTCGAGAAGTTTAATGAGGAGAGGTATGCA
CTCGGCTTCACCTATTAGCTTCTTCATCTCTGGTGAGCTGCATACCCTGCAGATTGCTGCTGCTGCTGCCTGCTGTGCACCAAGTGATCCCGACTTGAGCACGTGTACTA
GACGAGGGAGGAAGCCGAGAGACAACAGAAGTTCCATTGAAACTGAGCTGACTAAATTCCTCAATGCCCCGACCACGGATTCTTGA
Protein sequenceShow/hide protein sequence
MLTMDIISLIVIVTVDYDSRIWWHTFQPGRDSIVFIQIQFCNFTNFFAPGVSISDSFFRYPIAPYDIISFLHFLLEESDPRHATAYFFAVFWGLGSSSWTRFGTLFSSLL
TSLQFCERVTRLEIACAATSRTLFDLASRSLMRRGMHSASPISFFISGELHTLQIAAAAACCAPSDPDLSTCTRRGRKPRDNRSSIETELTKFLNAPTTDS