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Lsi10G000100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G000100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr10:200072..200970
RNA-Seq ExpressionLsi10G000100
SyntenyLsi10G000100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.9e-0550Show/hide
Query:  MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISI
        MG +  +H +E    ++ ++ AE++    + AV S E QLLICRKAREV TDDY QL E+YQE+SI
Subjt:  MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISI
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]8.4e-0550Show/hide
Query:  MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISI
        MG +  +H +E    ++ ++ AE++    + AV S E QLLICRKAREV TDDY QL E+YQE+SI
Subjt:  MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISI
KAA0034967.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.7e-0537.04Show/hide
Query:  LERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISILSTSNDSPARHHTYTAQQQRVVSF
        + R++   H    + +      AVAS E QLLICR A+EV T+D+ +LK E++E+S+ + S   P RH T+T   + +  F
Subjt:  LERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISILSTSNDSPARHHTYTAQQQRVVSF
TYK21322.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.7e-0537.04Show/hide
Query:  LERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISILSTSNDSPARHHTYTAQQQRVVSF
        + R++   H    + +      AVAS E QLLICR A+EV T+D+ +LK E++E+S+ + S   P RH T+T   + +  F
Subjt:  LERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISILSTSNDSPARHHTYTAQQQRVVSF
XP_008464352.1 PREDICTED: glial fibrillary acidic protein-like, partial [Cucumis melo]4.9e-0550Show/hide
Query:  MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISI
        MG +  +H +E    ++ ++ AE++    + AV S E QLLICRKAREV TDDY QL E+YQE+SI
Subjt:  MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISI
TrEMBL top hitse value%identityAlignment
A0A1S3CLQ1 glial fibrillary acidic protein-like2.4e-0550Show/hide
Query:  MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISI
        MG +  +H +E    ++ ++ AE++    + AV S E QLLICRKAREV TDDY QL E+YQE+SI
Subjt:  MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISI
A0A5A7SM49 Glial fibrillary acidic protein-like2.4e-0550Show/hide
Query:  MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISI
        MG +  +H +E    ++ ++ AE++    + AV S E QLLICRKAREV TDDY QL E+YQE+SI
Subjt:  MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISI
A0A5A7SUT0 Reverse transcriptase4.1e-0550Show/hide
Query:  MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISI
        MG +  +H +E    ++ ++ AE++    + AV S E QLLICRKAREV TDDY QL E+YQE+SI
Subjt:  MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISI
A0A5A7T064 Glial fibrillary acidic protein-like8.2e-0637.04Show/hide
Query:  LERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISILSTSNDSPARHHTYTAQQQRVVSF
        + R++   H    + +      AVAS E QLLICR A+EV T+D+ +LK E++E+S+ + S   P RH T+T   + +  F
Subjt:  LERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISILSTSNDSPARHHTYTAQQQRVVSF
A0A5D3DCM3 Glial fibrillary acidic protein-like8.2e-0637.04Show/hide
Query:  LERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISILSTSNDSPARHHTYTAQQQRVVSF
        + R++   H    + +      AVAS E QLLICR A+EV T+D+ +LK E++E+S+ + S   P RH T+T   + +  F
Subjt:  LERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISILSTSNDSPARHHTYTAQQQRVVSF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAGAAAAGTCAAGAACATGATTTGGAACGATTAAGAGACAGGAATCACGTCCTAGTAGCAGAAAATGAAGGATTGAGAGAAGAGGATGCTGTTGCAAGTTTTGA
AGGCCAGTTGCTGATATGTCGTAAGGCGCGAGAGGTCGCAACAGATGACTATACTCAGTTGAAGGAAGAGTATCAAGAAATATCAATTCTTAGCACAAGCAATGACTCTC
CAGCAAGGCATCATACCTACACAGCACAACAGCAAAGAGTTGTCTCGTTTCCTAGGGGTTATAGGGCAATACCTCGGGCGTTTTGGGTGCTACCATTAGATTTTAGAGTC
ATAGTTTTCCAAAAGCATGTATTTCATTTTGTAGGATCTCGTATTAAGATCCTGGAGTTTGTCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGACAGAAAAGTCAAGAACATGATTTGGAACGATTAAGAGACAGGAATCACGTCCTAGTAGCAGAAAATGAAGGATTGAGAGAAGAGGATGCTGTTGCAAGTTTTGA
AGGCCAGTTGCTGATATGTCGTAAGGCGCGAGAGGTCGCAACAGATGACTATACTCAGTTGAAGGAAGAGTATCAAGAAATATCAATTCTTAGCACAAGCAATGACTCTC
CAGCAAGGCATCATACCTACACAGCACAACAGCAAAGAGTTGTCTCGTTTCCTAGGGGTTATAGGGCAATACCTCGGGCGTTTTGGGTGCTACCATTAGATTTTAGAGTC
ATAGTTTTCCAAAAGCATGTATTTCATTTTGTAGGATCTCGTATTAAGATCCTGGAGTTTGTCATTTAG
Protein sequenceShow/hide protein sequence
MGQKSQEHDLERLRDRNHVLVAENEGLREEDAVASFEGQLLICRKAREVATDDYTQLKEEYQEISILSTSNDSPARHHTYTAQQQRVVSFPRGYRAIPRAFWVLPLDFRV
IVFQKHVFHFVGSRIKILEFVI