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Lsi10G000450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G000450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:727502..728458
RNA-Seq ExpressionLsi10G000450
SyntenyLsi10G000450
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140001.1 uncharacterized protein LOC101219556 [Cucumis sativus]3.9e-5796.75Show/hide
Query:  MAGKFPLSSSLTIKFPLQQNP-SSFFPPLPSPFSSPKLRPT-ASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
        MA KFPLSSSLTIKFPLQQNP SSFFPPLPSPFSSPKLRPT +SRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAGKFPLSSSLTIKFPLQQNP-SSFFPPLPSPFSSPKLRPT-ASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR
XP_008464165.1 PREDICTED: uncharacterized protein LOC103502113 [Cucumis melo]5.1e-5795.93Show/hide
Query:  MAGKFPLSSSLTIKFPLQQNP-SSFFPPLPSPFSSPKLRPT-ASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
        MA KFPLSSSLT+KFPLQQNP SSFFPPLPSPFSSPKLRPT +SRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAGKFPLSSSLTIKFPLQQNP-SSFFPPLPSPFSSPKLRPT-ASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR
XP_022140463.1 uncharacterized protein LOC111011130 [Momordica charantia]1.6e-5088.71Show/hide
Query:  MAGKFPLSSSLTIKFPLQQNPSSFFPPLPSPFSSPKLRP--TASRFKLLANLGGGDAEIKK-GGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIII
        MA KF LSSSLTIKFPLQQNPSSFF PLPS  SSP  +P   ASRFKL+ANLGGGDAEIKK GGKKKFITKEEEPEQYWQ+AGEREGENPMKTPLPYIII
Subjt:  MAGKFPLSSSLTIKFPLQQNPSSFFPPLPSPFSSPKLRP--TASRFKLLANLGGGDAEIKK-GGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIII

Query:  FGMSTPFVILAIAFANGWVKVPVR
        FGMSTPFVILAIAFANGWVKVPVR
Subjt:  FGMSTPFVILAIAFANGWVKVPVR
XP_022971133.1 uncharacterized protein LOC111469898 [Cucurbita maxima]6.4e-5289.43Show/hide
Query:  MAGKFPLSSSL-TIKFPLQQNPSSFFPPLP-SPFSSPKLRPTASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
        MA KFPLSSSL TIKFPLQQNPS FFPPLP + FS PK +P AS+FKLLAN GGGDAE+KKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAGKFPLSSSL-TIKFPLQQNPSSFFPPLP-SPFSSPKLRPTASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR
XP_038902667.1 uncharacterized protein LOC120089303 [Benincasa hispida]1.5e-5391.74Show/hide
Query:  MAGKFPLSSSLTIKFPLQQNPSSFFPPLPSPFSSPKLRPTASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGM
        MA K PLSSSLTIKFPLQQ+PSSFF PLP PFS PK RP  SRFKLLANLGGGDAEIKKG KKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGM
Subjt:  MAGKFPLSSSLTIKFPLQQNPSSFFPPLPSPFSSPKLRPTASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGM

Query:  STPFVILAIAFANGWVKVPVR
        STPFVILAIAFANGWVKVPVR
Subjt:  STPFVILAIAFANGWVKVPVR
TrEMBL top hitse value%identityAlignment
A0A0A0KA68 Uncharacterized protein1.9e-5796.75Show/hide
Query:  MAGKFPLSSSLTIKFPLQQNP-SSFFPPLPSPFSSPKLRPT-ASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
        MA KFPLSSSLTIKFPLQQNP SSFFPPLPSPFSSPKLRPT +SRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAGKFPLSSSLTIKFPLQQNP-SSFFPPLPSPFSSPKLRPT-ASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR
A0A1S3CKW7 uncharacterized protein LOC1035021132.5e-5795.93Show/hide
Query:  MAGKFPLSSSLTIKFPLQQNP-SSFFPPLPSPFSSPKLRPT-ASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
        MA KFPLSSSLT+KFPLQQNP SSFFPPLPSPFSSPKLRPT +SRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAGKFPLSSSLTIKFPLQQNP-SSFFPPLPSPFSSPKLRPT-ASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR
A0A5D3CJG8 Uncharacterized protein2.5e-5795.93Show/hide
Query:  MAGKFPLSSSLTIKFPLQQNP-SSFFPPLPSPFSSPKLRPT-ASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
        MA KFPLSSSLT+KFPLQQNP SSFFPPLPSPFSSPKLRPT +SRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAGKFPLSSSLTIKFPLQQNP-SSFFPPLPSPFSSPKLRPT-ASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR
A0A6J1CI22 uncharacterized protein LOC1110111307.6e-5188.71Show/hide
Query:  MAGKFPLSSSLTIKFPLQQNPSSFFPPLPSPFSSPKLRP--TASRFKLLANLGGGDAEIKK-GGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIII
        MA KF LSSSLTIKFPLQQNPSSFF PLPS  SSP  +P   ASRFKL+ANLGGGDAEIKK GGKKKFITKEEEPEQYWQ+AGEREGENPMKTPLPYIII
Subjt:  MAGKFPLSSSLTIKFPLQQNPSSFFPPLPSPFSSPKLRP--TASRFKLLANLGGGDAEIKK-GGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIII

Query:  FGMSTPFVILAIAFANGWVKVPVR
        FGMSTPFVILAIAFANGWVKVPVR
Subjt:  FGMSTPFVILAIAFANGWVKVPVR
A0A6J1I5Y3 uncharacterized protein LOC1114698983.1e-5289.43Show/hide
Query:  MAGKFPLSSSL-TIKFPLQQNPSSFFPPLP-SPFSSPKLRPTASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
        MA KFPLSSSL TIKFPLQQNPS FFPPLP + FS PK +P AS+FKLLAN GGGDAE+KKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAGKFPLSSSL-TIKFPLQQNPSSFFPPLP-SPFSSPKLRPTASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G05310.1 unknown protein1.3e-3465.22Show/hide
Query:  LSSSLTIKFPLQQNPSSFFPPLPSPFSSPKLRPTASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVI
        ++SS +    L   P  F PP P  F          +FKL A LGGGD E+K   KKKFITK+EEPEQYWQ+ GEREGENPMKTPLPYIIIFGMSTPFVI
Subjt:  LSSSLTIKFPLQQNPSSFFPPLPSPFSSPKLRPTASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVI

Query:  LAIAFANGWVKVPVR
        LAIAFANGW+KVP+R
Subjt:  LAIAFANGWVKVPVR
AT4G13500.1 unknown protein4.4e-3562.41Show/hide
Query:  MAGKFPLSSSLTIKFPLQQNPSS------------FFPPLPSPFSSPKLRPTASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPM
        MA KF +SSS         + SS            FF P PSP   P+       FKL A LGGGD E+K   KKKFITKEEEPEQYWQ+ GEREGENPM
Subjt:  MAGKFPLSSSLTIKFPLQQNPSS------------FFPPLPSPFSSPKLRPTASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPM

Query:  KTPLPYIIIFGMSTPFVILAIAFANGWVKVPVR
        KTPLPYIIIFGMSTPFVILAIAFANGW+KVP+R
Subjt:  KTPLPYIIIFGMSTPFVILAIAFANGWVKVPVR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGCAAATTCCCTCTTTCTTCTTCCCTTACCATCAAATTTCCTCTCCAACAAAACCCATCTTCCTTCTTCCCTCCTCTTCCTTCCCCCTTCTCGTCGCCAAAGCT
GAGGCCAACAGCTTCTCGCTTCAAGCTTCTTGCAAATTTAGGTGGTGGAGATGCTGAAATCAAGAAGGGAGGGAAGAAAAAGTTTATAACTAAAGAAGAAGAGCCAGAGC
AGTATTGGCAGACAGCAGGGGAGAGGGAAGGGGAGAATCCTATGAAGACTCCTCTTCCTTATATTATCATCTTCGGCATGTCGACTCCGTTCGTGATCTTAGCCATAGCT
TTTGCCAATGGCTGGGTTAAGGTTCCTGTGAGATGA
mRNA sequenceShow/hide mRNA sequence
GTAAAGGAAAGATGAAGATGGGCCTTTGGGCTTGGCTGTCATATCAAGCATTGGCTAAGATGAGCAAATATCAGTGCCACAATATTCATATCCAAAACTCCTGTGTGATA
TAATATGCGATCCCCAACAAACACAACATTCACTACCTCACAACTGCTTCAACAATGGCCGGCAAATTCCCTCTTTCTTCTTCCCTTACCATCAAATTTCCTCTCCAACA
AAACCCATCTTCCTTCTTCCCTCCTCTTCCTTCCCCCTTCTCGTCGCCAAAGCTGAGGCCAACAGCTTCTCGCTTCAAGCTTCTTGCAAATTTAGGTGGTGGAGATGCTG
AAATCAAGAAGGGAGGGAAGAAAAAGTTTATAACTAAAGAAGAAGAGCCAGAGCAGTATTGGCAGACAGCAGGGGAGAGGGAAGGGGAGAATCCTATGAAGACTCCTCTT
CCTTATATTATCATCTTCGGCATGTCGACTCCGTTCGTGATCTTAGCCATAGCTTTTGCCAATGGCTGGGTTAAGGTTCCTGTGAGATGAATCTGATCAAACTCATTGTG
CAACTGCAAATGCATAAGGGAACACCATGACAGTAACCTGAGATCTTCTACAGCCCACAAAACCCACTGTTTATGCCTGTTTTGAGTTGTAATGTTATTCCAGAAGCTAA
TACAAAGTATAGTAACTCAGTTCAATTTCGCTGTTTTGAGTTTGGATTCTTTTTCCCTCCATTTCAATACAAGAATTTGTTGTTGCTATCTTTGAGTAA
Protein sequenceShow/hide protein sequence
MAGKFPLSSSLTIKFPLQQNPSSFFPPLPSPFSSPKLRPTASRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIA
FANGWVKVPVR