; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G000520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G000520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionzinc finger CCCH domain-containing protein 18
Genome locationchr10:819756..822970
RNA-Seq ExpressionLsi10G000520
SyntenyLsi10G000520
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR000571 - Zinc finger, CCCH-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR025605 - OST-HTH/LOTUS domain
IPR034365 - AtC3H46-like, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022943887.1 zinc finger CCCH domain-containing protein 18-like isoform X1 [Cucurbita moschata]1.4e-12360.79Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL
        ME PE T  +F RI +++ E A+ I+EY+ILN ++ DMIRLA   DT +Q  I   KSDLGIT+M       +  LS VSISDP    S Y R PSSR L
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL

Query:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR
         P   +S   +QN M++LSL+DQ +SVNPVG                         G P K+CHYF+KGYCKHGSKCRYFHGQV   + N EQ++++R +
Subjt:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR

Query:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY
         LENLEMEIV LLKSRRG PISIASLPMVYY+ YGK+LQADGYLTE +  G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED  KYI+ SEN ARQIY
Subjt:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY

Query:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL
        +TFPA STFTEQDVS+YF KYGPVQDV+IP QQ+RMYGFVTFVY ETA+H+LS  TTHFVCGAQVLVKPYKEKS+L QR N E          N  EG++
Subjt:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL

Query:  EES
        EE+
Subjt:  EES

XP_022985797.1 zinc finger CCCH domain-containing protein 18-like isoform X1 [Cucurbita maxima]8.4e-12462.03Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL
        ME PE T  +F RI +L+ E A+ I+EY+ILN ++ DMIRLA   DT +Q  I   KSDLGIT+M       +  LS VSISDP L  S Y R PSSR L
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL

Query:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR
         P   +S   +QN MQ+LSL+DQ ESVN VG                      RR   P+K+CHYF+KGYCKHGSKCRYFHGQV     N EQ++++R +
Subjt:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR

Query:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY
         LENLEMEIV LLKSRRG PISIASLP+VYYE YGK+LQADGYLTE +  G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED  KYI+ SEN ARQIY
Subjt:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY

Query:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL
        +TFPA STFTEQDVS+YF KYGPVQDV+IP QQSRMYGFVTFVY ETA+H+LS  TTHFVCGAQVLVKPYKEKS+L QR N E          N  EG++
Subjt:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL

Query:  EES
        EE+
Subjt:  EES

XP_022985798.1 zinc finger CCCH domain-containing protein 18-like isoform X2 [Cucurbita maxima]8.4e-12462.03Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL
        ME PE T  +F RI +L+ E A+ I+EY+ILN ++ DMIRLA   DT +Q  I   KSDLGIT+M       +  LS VSISDP L  S Y R PSSR L
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL

Query:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR
         P   +S   +QN MQ+LSL+DQ ESVN VG                      RR   P+K+CHYF+KGYCKHGSKCRYFHGQV     N EQ++++R +
Subjt:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR

Query:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY
         LENLEMEIV LLKSRRG PISIASLP+VYYE YGK+LQADGYLTE +  G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED  KYI+ SEN ARQIY
Subjt:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY

Query:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL
        +TFPA STFTEQDVS+YF KYGPVQDV+IP QQSRMYGFVTFVY ETA+H+LS  TTHFVCGAQVLVKPYKEKS+L QR N E          N  EG++
Subjt:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL

Query:  EES
        EE+
Subjt:  EES

XP_023512131.1 zinc finger CCCH domain-containing protein 18-like isoform X1 [Cucurbita pepo subsp. pepo]2.2e-12461.29Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL
        ME PE T  +F RI +++ E A+ I+EY+ILN ++ DMIRLA   DT +Q  I   KSDLGIT+M       +  LS VSISDP    S Y R PSSR L
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL

Query:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR
         P   +S   +QN MQ+LSL+DQ ESVNPVG                         G P K+CHYF KGYCKHGSKCRYFHGQV   + N EQ++++R +
Subjt:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR

Query:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY
         LENLEMEIV LLKSRRG PISIASLPMVYY+ YGK+LQADGYLTE +  G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED  K+I+ SEN ARQIY
Subjt:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY

Query:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL
        +TFPA STFTEQDVSNYF KYGPVQDV+IP QQ+RMYGFVTFVY ETA+H+LS  TTHFVCGAQVLVKPYKEKS+L QR N E          N  EG++
Subjt:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL

Query:  EES
        EE+
Subjt:  EES

XP_023512132.1 zinc finger CCCH domain-containing protein 18-like isoform X2 [Cucurbita pepo subsp. pepo]2.2e-12461.29Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL
        ME PE T  +F RI +++ E A+ I+EY+ILN ++ DMIRLA   DT +Q  I   KSDLGIT+M       +  LS VSISDP    S Y R PSSR L
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL

Query:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR
         P   +S   +QN MQ+LSL+DQ ESVNPVG                         G P K+CHYF KGYCKHGSKCRYFHGQV   + N EQ++++R +
Subjt:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR

Query:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY
         LENLEMEIV LLKSRRG PISIASLPMVYY+ YGK+LQADGYLTE +  G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED  K+I+ SEN ARQIY
Subjt:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY

Query:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL
        +TFPA STFTEQDVSNYF KYGPVQDV+IP QQ+RMYGFVTFVY ETA+H+LS  TTHFVCGAQVLVKPYKEKS+L QR N E          N  EG++
Subjt:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL

Query:  EES
        EE+
Subjt:  EES

TrEMBL top hitse value%identityAlignment
A0A6J1CFC6 zinc finger CCCH domain-containing protein 18 isoform X22.1e-12058.75Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLILN-INEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSS--
        M+F +ST+ V++RI KLEPEY S I+ YL+L+   E DMIR+A S D+ IQ L+ K KS+LGI ++AAP PA           DP LQ S    +PS   
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLILN-INEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSS--

Query:  -RQLLPHSTFPLQNLMQYLSLDDQLES-VNPVGPDHSTHCSGFYSEQGMVGVRSNRR----CGLPVKVCHYFNKGYCKHGSKCRYFHGQ--VTGESG---
           L+    + LQ+ MQ+++L++QLES +NPVG +     S +Y  +  +G+R +RR       PVKVCHYF+KGYCKHG+ CRYFH Q     ESG   
Subjt:  -RQLLPHSTFPLQNLMQYLSLDDQLES-VNPVGPDHSTHCSGFYSEQGMVGVRSNRR----CGLPVKVCHYFNKGYCKHGSKCRYFHGQ--VTGESG---

Query:  -NEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKY
           E+QI++    LE LEMEI+ELLKSRRG PISIASLPM+YYE+YG++LQADGYLTESQR+GKAG+SLTKLLA L  I ++DRPHGQHSVILAEDA KY
Subjt:  -NEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKY

Query:  IEFS--ENSARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPP
        +EFS  E  +RQIYLTFPAES+FTEQDVSNYFSKYG VQDVRIPCQQ RM+GFVTF Y ET K ILS    H VCGA+VLVKPY+EK +L +RK+ EK P
Subjt:  IEFS--ENSARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPP

Query:  PPLCYLQNYM-EGDLEE
         P+ Y+ N+M +GDLE+
Subjt:  PPLCYLQNYM-EGDLEE

A0A6J1FU98 zinc finger CCCH domain-containing protein 18-like isoform X16.9e-12460.79Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL
        ME PE T  +F RI +++ E A+ I+EY+ILN ++ DMIRLA   DT +Q  I   KSDLGIT+M       +  LS VSISDP    S Y R PSSR L
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL

Query:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR
         P   +S   +QN M++LSL+DQ +SVNPVG                         G P K+CHYF+KGYCKHGSKCRYFHGQV   + N EQ++++R +
Subjt:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR

Query:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY
         LENLEMEIV LLKSRRG PISIASLPMVYY+ YGK+LQADGYLTE +  G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED  KYI+ SEN ARQIY
Subjt:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY

Query:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL
        +TFPA STFTEQDVS+YF KYGPVQDV+IP QQ+RMYGFVTFVY ETA+H+LS  TTHFVCGAQVLVKPYKEKS+L QR N E          N  EG++
Subjt:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL

Query:  EES
        EE+
Subjt:  EES

A0A6J1FXG9 zinc finger CCCH domain-containing protein 18-like isoform X26.9e-12460.79Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL
        ME PE T  +F RI +++ E A+ I+EY+ILN ++ DMIRLA   DT +Q  I   KSDLGIT+M       +  LS VSISDP    S Y R PSSR L
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL

Query:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR
         P   +S   +QN M++LSL+DQ +SVNPVG                         G P K+CHYF+KGYCKHGSKCRYFHGQV   + N EQ++++R +
Subjt:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR

Query:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY
         LENLEMEIV LLKSRRG PISIASLPMVYY+ YGK+LQADGYLTE +  G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED  KYI+ SEN ARQIY
Subjt:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY

Query:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL
        +TFPA STFTEQDVS+YF KYGPVQDV+IP QQ+RMYGFVTFVY ETA+H+LS  TTHFVCGAQVLVKPYKEKS+L QR N E          N  EG++
Subjt:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL

Query:  EES
        EE+
Subjt:  EES

A0A6J1J5W0 zinc finger CCCH domain-containing protein 18-like isoform X14.1e-12462.03Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL
        ME PE T  +F RI +L+ E A+ I+EY+ILN ++ DMIRLA   DT +Q  I   KSDLGIT+M       +  LS VSISDP L  S Y R PSSR L
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL

Query:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR
         P   +S   +QN MQ+LSL+DQ ESVN VG                      RR   P+K+CHYF+KGYCKHGSKCRYFHGQV     N EQ++++R +
Subjt:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR

Query:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY
         LENLEMEIV LLKSRRG PISIASLP+VYYE YGK+LQADGYLTE +  G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED  KYI+ SEN ARQIY
Subjt:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY

Query:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL
        +TFPA STFTEQDVS+YF KYGPVQDV+IP QQSRMYGFVTFVY ETA+H+LS  TTHFVCGAQVLVKPYKEKS+L QR N E          N  EG++
Subjt:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL

Query:  EES
        EE+
Subjt:  EES

A0A6J1JEP2 zinc finger CCCH domain-containing protein 18-like isoform X24.1e-12462.03Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL
        ME PE T  +F RI +L+ E A+ I+EY+ILN ++ DMIRLA   DT +Q  I   KSDLGIT+M       +  LS VSISDP L  S Y R PSSR L
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQL

Query:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR
         P   +S   +QN MQ+LSL+DQ ESVN VG                      RR   P+K+CHYF+KGYCKHGSKCRYFHGQV     N EQ++++R +
Subjt:  LP---HSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR

Query:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY
         LENLEMEIV LLKSRRG PISIASLP+VYYE YGK+LQADGYLTE +  G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED  KYI+ SEN ARQIY
Subjt:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY

Query:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL
        +TFPA STFTEQDVS+YF KYGPVQDV+IP QQSRMYGFVTFVY ETA+H+LS  TTHFVCGAQVLVKPYKEKS+L QR N E          N  EG++
Subjt:  LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDL

Query:  EES
        EE+
Subjt:  EES

SwissProt top hitse value%identityAlignment
Q0D3J9 Zinc finger CCCH domain-containing protein 536.2e-3730.19Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSDLGI----------TQMAAPVPASAPTL-------------
        M+  E+T+ VF RI  L+P++A+ I+ +L++ +  E +MIRLA   +  +  ++ K + +LG+          +  AA   A +P +             
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSDLGI----------TQMAAPVPASAPTL-------------

Query:  SSVSISDPN----------------------LQFSSYTRAPSSRQLLPHSTFPLQNLMQYLSLDDQLESVN--------------------PVGPDHSTH
        S +S+S P+                      +       +P++    P   F    LM  L L DQL  +N                    P G D    
Subjt:  SSVSISDPN----------------------LQFSSYTRAPSSRQLLPHSTFPLQNLMQYLSLDDQLESVN--------------------PVGPDHSTH

Query:  CSGFYSEQGMVGVRSNRRC---------GLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNE------EQQ---IVIRSRNLENLEMEIVELLKSRRGI
                G  G R +            GL  K C Y+ +GYCK+GS CR+ HG +  ++  +      EQQ    +IRS+   +  +       S  G 
Subjt:  CSGFYSEQGMVGVRSNRRC---------GLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNE------EQQ---IVIRSRNLENLEMEIVELLKSRRGI

Query:  PISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIYLTFPAESTFTEQDVSNYFS
          S+   P    +     LQ      ESQR   A  +   +L    +   + RP  + +         +       +RQIYLTFPA+STF E+DVSNYFS
Subjt:  PISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIYLTFPAESTFTEQDVSNYFS

Query:  KYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPP
         YGPV DVRIP QQ RM+GFVTFVY ET K IL+    HF+C A+VLVKPYKEK K+  +   +  P
Subjt:  KYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPP

Q6ZK57 Zinc finger CCCH domain-containing protein 541.5e-7055.47Show/hide
Query:  RSNRRCGLPV-KVCHYFNKGYCKHGSKCRYFHGQV-----TGESGN----EEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA
        R+ R  GL   + CHYF+KG CK+G  C Y H QV      G + N      Q   +   +LE LEMEI ELL SRRG P+SIASLP +Y E+YGK LQA
Subjt:  RSNRRCGLPV-KVCHYFNKGYCKHGSKCRYFHGQV-----TGESGN----EEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA

Query:  DGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSEN-------------SARQIYLTFPAESTFTEQDVSNYFSKYGPVQDV
        DGYLTESQR+GKAG+SLT+LL+ LN I V++RPHGQHSV+LAEDA KY++F                S+ QIYLTFPAESTF E DV+NYF +YGPV+DV
Subjt:  DGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSEN-------------SARQIYLTFPAESTFTEQDVSNYFSKYGPVQDV

Query:  RIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVE--KPPPPLC
        RIPCQ+ RM+GFV+F   ET   IL     HF+CG++VLVKPY+EKSK   R  V+  K   P C
Subjt:  RIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVE--KPPPPLC

Q84ZT0 Putative zinc finger CCCH domain-containing protein 512.0e-5149.78Show/hide
Query:  KVCHY-FNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGI--PISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSL
        K CH+ F +GYCK G  C++FHG V  E  N  Q  V    +L  L+MEI ELL    GI  P+++  LP +Y+E+YGK L+ DG+LTESQ++G+ G SL
Subjt:  KVCHY-FNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGI--PISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSL

Query:  TKLLASLNSICVLDRPHGQHSVILAEDAR-KYIEF-----------SENSARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYV
        T LL  LN+I V++R HGQ+ V+L EDAR KY++            +   + QIY+TFP  S FT+ DV NYF ++GPV  VRIP Q+ RM+GFV+F+Y 
Subjt:  TKLLASLNSICVLDRPHGQHSVILAEDAR-KYIEF-----------SENSARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYV

Query:  ETAKHILSTTTTHFVCGAQVLVKPYKEKSKL
        ET + ILS  T HF+CG +VLVK Y EKS+L
Subjt:  ETAKHILSTTTTHFVCGAQVLVKPYKEKSKL

Q9SJ41 Zinc finger CCCH domain-containing protein 182.0e-9148.61Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL--NINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPAS----APTLSSVSISDPNLQFSSYTRA
        M F ES   V  RI +LEPE A+ I  YL+L       DMIRLA   D+ +  +I  VK +L         P S     P   S + S P    S     
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL--NINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPAS----APTLSSVSISDPNLQFSSYTRA

Query:  PSSRQLLPHST--FPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYS-EQGMVGVRSNRRC----GLPVKVCHYFNKGYCKHGSKCRYFHGQVTGE---
        P       +ST    LQN +Q+L+ +D L S     P+ S   +GF+S E+  + +R++RR       PVK+CHYFNKG+CKHG+ CRYFHGQ+  E   
Subjt:  PSSRQLLPHST--FPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYS-EQGMVGVRSNRRC----GLPVKVCHYFNKGYCKHGSKCRYFHGQVTGE---

Query:  --------SGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASL-NSICVLDRPHGQHS
                +   +++ V+   +LE LE EI+ELLK RRG PISIASLPM+YYE+YG++LQA+GYLTESQR+GKAG+SLTKLLA L N+I ++DRPHGQHS
Subjt:  --------SGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASL-NSICVLDRPHGQHS

Query:  VILAEDARKYIEFSEN---------SARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKP
        VILAEDA K++E++            +RQIYLTFPAES+FTE DVS YF+ YG V+DVRIPCQQ RMYGFVTF   ET KHIL+    HF+C A+VLVKP
Subjt:  VILAEDARKYIEFSEN---------SARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKP

Query:  YKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLE
        Y+EKS+ S+  +  KP   + Y   ++E D+E
Subjt:  YKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLE

Q9SV09 Zinc finger CCCH domain-containing protein 461.1e-3634.29Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQ
        M+  E+T  V  RI  L+PE AS I+  L+L +  E +MIRLA   +T +  +I+K K +LG+   +    +    L    IS  N + SS    P+S  
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQ

Query:  LLPHSTFPLQNLMQYLSLDDQL--ESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR
           +     ++L     L D +   S + +G  H+   S      G  G       G+P   C YF +G+CK+G+ CR+ H     +      +I +   
Subjt:  LLPHSTFPLQNLMQYLSLDDQL--ESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR

Query:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKA---GFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSAR
        N  ++   +     +R  +P          +   G +LQ +    + QR   A   G  L KL           RP       +A  A          +R
Subjt:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKA---GFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSAR

Query:  QIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQR
        QIYLTFPA+S F E+DVSNYFS +GPVQDVRIP QQ RM+GFVTFVY ET K IL+    HFVC ++VLVKPYKEK K+  +
Subjt:  QIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQR

Arabidopsis top hitse value%identityAlignment
AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain1.4e-9248.61Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL--NINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPAS----APTLSSVSISDPNLQFSSYTRA
        M F ES   V  RI +LEPE A+ I  YL+L       DMIRLA   D+ +  +I  VK +L         P S     P   S + S P    S     
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL--NINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPAS----APTLSSVSISDPNLQFSSYTRA

Query:  PSSRQLLPHST--FPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYS-EQGMVGVRSNRRC----GLPVKVCHYFNKGYCKHGSKCRYFHGQVTGE---
        P       +ST    LQN +Q+L+ +D L S     P+ S   +GF+S E+  + +R++RR       PVK+CHYFNKG+CKHG+ CRYFHGQ+  E   
Subjt:  PSSRQLLPHST--FPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYS-EQGMVGVRSNRRC----GLPVKVCHYFNKGYCKHGSKCRYFHGQVTGE---

Query:  --------SGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASL-NSICVLDRPHGQHS
                +   +++ V+   +LE LE EI+ELLK RRG PISIASLPM+YYE+YG++LQA+GYLTESQR+GKAG+SLTKLLA L N+I ++DRPHGQHS
Subjt:  --------SGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASL-NSICVLDRPHGQHS

Query:  VILAEDARKYIEFSEN---------SARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKP
        VILAEDA K++E++            +RQIYLTFPAES+FTE DVS YF+ YG V+DVRIPCQQ RMYGFVTF   ET KHIL+    HF+C A+VLVKP
Subjt:  VILAEDARKYIEFSEN---------SARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKP

Query:  YKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLE
        Y+EKS+ S+  +  KP   + Y   ++E D+E
Subjt:  YKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLE

AT3G21100.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.6e-3228.8Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSDLGI-----TQMAAPV-PASAPT---LSSVSISDPNLQFSS
        M+  + T  +F +I  LEP++AS I+ YL+L ++ + D++RLAL  +T +Q + +K KS LG+     +  ++P+ P S P      S+S S P   FS 
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSDLGI-----TQMAAPV-PASAPT---LSSVSISDPNLQFSS

Query:  YTRAPS--------SRQLLPHSTFPL------------------------QNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVK
           +PS        S   +  S F                          Q L  YLS  ++  S N    D S    GF ++ G      ++R      
Subjt:  YTRAPS--------SRQLLPHSTFPL------------------------QNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVK

Query:  VCHYFNKGYCKHGSKCRYFHGQV-----------TGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRN
         C    +     G   R+ HG +           + +  + +Q+ ++R +  +   M   + L +  G P+S           Y K L    +   + R+
Subjt:  VCHYFNKGYCKHGSKCRYFHGQV-----------TGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRN

Query:  GKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKH
        G   F                   G+H     ++     + S ++++QIYLTFPA+S+FT++DVSNYF  +GPVQDVRIP QQ RM+GFVTF++ ET + 
Subjt:  GKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKH

Query:  ILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEK
        IL+    HF+C ++VLVKPYKEK ++ +++  ++
Subjt:  ILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEK

AT3G51950.1 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein7.5e-3834.29Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQ
        M+  E+T  V  RI  L+PE AS I+  L+L +  E +MIRLA   +T +  +I+K K +LG+   +    +    L    IS  N + SS    P+S  
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQ

Query:  LLPHSTFPLQNLMQYLSLDDQL--ESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR
           +     ++L     L D +   S + +G  H+   S      G  G       G+P   C YF +G+CK+G+ CR+ H     +      +I +   
Subjt:  LLPHSTFPLQNLMQYLSLDDQL--ESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR

Query:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKA---GFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSAR
        N  ++   +     +R  +P          +   G +LQ +    + QR   A   G  L KL           RP       +A  A          +R
Subjt:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKA---GFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSAR

Query:  QIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQR
        QIYLTFPA+S F E+DVSNYFS +GPVQDVRIP QQ RM+GFVTFVY ET K IL+    HFVC ++VLVKPYKEK K+  +
Subjt:  QIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQR

AT3G51950.2 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein7.5e-3834.29Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQ
        M+  E+T  V  RI  L+PE AS I+  L+L +  E +MIRLA   +T +  +I+K K +LG+   +    +    L    IS  N + SS    P+S  
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQ

Query:  LLPHSTFPLQNLMQYLSLDDQL--ESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR
           +     ++L     L D +   S + +G  H+   S      G  G       G+P   C YF +G+CK+G+ CR+ H     +      +I +   
Subjt:  LLPHSTFPLQNLMQYLSLDDQL--ESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSR

Query:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKA---GFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSAR
        N  ++   +     +R  +P          +   G +LQ +    + QR   A   G  L KL           RP       +A  A          +R
Subjt:  NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKA---GFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSAR

Query:  QIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQR
        QIYLTFPA+S F E+DVSNYFS +GPVQDVRIP QQ RM+GFVTFVY ET K IL+    HFVC ++VLVKPYKEK K+  +
Subjt:  QIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQR

AT3G52980.1 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein7.9e-8048.28Show/hide
Query:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL--NINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPAS--APTLSSVSISDPNLQFSSYTRAPS
        M F E+   V +RI +LEPE AS I+ YL+L  + N+ DMIRLA   D+ ++ +I  VK +L        +P+S         S+S  + Q    + +P 
Subjt:  MEFPESTEFVFDRIFKLEPEYASIILEYLIL--NINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPAS--APTLSSVSISDPNLQFSSYTRAPS

Query:  SRQLLPHSTFP---------LQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRC----GLPVKVCHYFNKGYCKHGSKCRYFHGQVTG
        S   +  S +            N+  +L  +D + S     P+ ST  S F  ++  + +R++RR       P+K+CHYFNKG+CKHG+ C   H  ++ 
Subjt:  SRQLLPHSTFP---------LQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRC----GLPVKVCHYFNKGYCKHGSKCRYFHGQVTG

Query:  ESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASL-NSICVLDRPHGQHSVILAEDA
             +++ V+   +LE LE EI+ELLKSRRG PISIA LPM+Y+E+YG+SLQA+GYLTESQR+GKAGFSLTKLLA L N+I ++DRPHGQHSVILAED 
Subjt:  ESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASL-NSICVLDRPHGQHSVILAEDA

Query:  RKYIEF----SENSA-----RQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILS
         K++E+    SE+ A     RQ+YLTFPAES+FTE DVSNYFS+ GPV+DVRIPCQQ RMYGFVTFVY+ET K IL+
Subjt:  RKYIEF----SENSA-----RQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCCTCAACGGCGTCGATTTCAGTGTGAAGAAGAAGATAAATAAAAAGAGAAAAAAAATGGAATTTCCAGAGTCAACAGAATTCGTGTTCGACAGAATCTTCAAATT
AGAACCGGAATATGCATCCATTATTCTTGAATACCTTATTCTAAACATCAACGAAGATGACATGATCCGATTGGCATTAAGTTCTGATACTTTTATCCAATGTCTCATCA
TCAAAGTCAAATCTGATCTCGGAATCACACAAATGGCGGCTCCGGTACCGGCCTCGGCCCCGACTTTGTCCTCTGTTTCAATTTCCGACCCTAATTTGCAATTCTCCTCA
TACACTCGTGCTCCATCCTCTCGTCAACTCCTCCCCCACTCCACTTTTCCCCTTCAAAACCTGATGCAATATCTCTCTCTAGACGACCAATTGGAATCGGTGAACCCGGT
CGGGCCGGATCATTCGACCCATTGCAGTGGGTTTTACTCTGAACAGGGGATGGTAGGTGTCCGGTCCAACCGGCGGTGTGGGTTGCCGGTGAAGGTTTGTCATTATTTCA
ACAAAGGGTATTGTAAACATGGGAGTAAATGCAGGTATTTTCATGGGCAAGTTACTGGGGAAAGTGGGAATGAGGAACAACAAATTGTGATTCGTAGTAGGAATCTTGAG
AACTTGGAAATGGAAATTGTTGAGCTTTTAAAATCGCGGCGAGGGATTCCGATTTCTATTGCATCTTTGCCAATGGTTTATTATGAACAATATGGGAAGAGTCTTCAAGC
AGATGGCTACCTTACTGAAAGCCAACGAAATGGGAAGGCTGGTTTTAGCCTCACTAAACTTCTTGCTAGTTTGAACTCCATTTGTGTCCTGGACAGACCACATGGCCAAC
ATTCGGTAATCTTAGCAGAGGATGCTCGAAAGTACATAGAATTTTCCGAAAACAGTGCTAGACAGATTTACCTTACATTTCCAGCTGAAAGTACTTTCACAGAACAGGAT
GTTTCAAACTACTTCAGCAAATATGGACCTGTTCAAGATGTTAGGATACCCTGCCAACAGAGCAGGATGTATGGATTTGTAACATTTGTATATGTTGAGACAGCCAAACA
TATTCTCTCAACTACAACAACTCATTTTGTATGTGGAGCTCAAGTTCTTGTTAAACCTTACAAGGAAAAATCTAAGCTTTCCCAGAGAAAGAATGTAGAGAAACCACCAC
CTCCTTTATGTTACCTTCAGAATTACATGGAAGGAGACTTGGAAGAATCAAAATATGGAAATGAAGAAATGCAGGTGTTTTCATCAACTGAACAGCAGCTGCATGAATTG
CTGGATTCTTGTACTGAACATCCTGTTGATAGGGAAGGTGTAAATAAAAGATATGATGTATCTTGCAGAGTGGAGGAAGAAGTTTTAGAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCCTCAACGGCGTCGATTTCAGTGTGAAGAAGAAGATAAATAAAAAGAGAAAAAAAATGGAATTTCCAGAGTCAACAGAATTCGTGTTCGACAGAATCTTCAAATT
AGAACCGGAATATGCATCCATTATTCTTGAATACCTTATTCTAAACATCAACGAAGATGACATGATCCGATTGGCATTAAGTTCTGATACTTTTATCCAATGTCTCATCA
TCAAAGTCAAATCTGATCTCGGAATCACACAAATGGCGGCTCCGGTACCGGCCTCGGCCCCGACTTTGTCCTCTGTTTCAATTTCCGACCCTAATTTGCAATTCTCCTCA
TACACTCGTGCTCCATCCTCTCGTCAACTCCTCCCCCACTCCACTTTTCCCCTTCAAAACCTGATGCAATATCTCTCTCTAGACGACCAATTGGAATCGGTGAACCCGGT
CGGGCCGGATCATTCGACCCATTGCAGTGGGTTTTACTCTGAACAGGGGATGGTAGGTGTCCGGTCCAACCGGCGGTGTGGGTTGCCGGTGAAGGTTTGTCATTATTTCA
ACAAAGGGTATTGTAAACATGGGAGTAAATGCAGGTATTTTCATGGGCAAGTTACTGGGGAAAGTGGGAATGAGGAACAACAAATTGTGATTCGTAGTAGGAATCTTGAG
AACTTGGAAATGGAAATTGTTGAGCTTTTAAAATCGCGGCGAGGGATTCCGATTTCTATTGCATCTTTGCCAATGGTTTATTATGAACAATATGGGAAGAGTCTTCAAGC
AGATGGCTACCTTACTGAAAGCCAACGAAATGGGAAGGCTGGTTTTAGCCTCACTAAACTTCTTGCTAGTTTGAACTCCATTTGTGTCCTGGACAGACCACATGGCCAAC
ATTCGGTAATCTTAGCAGAGGATGCTCGAAAGTACATAGAATTTTCCGAAAACAGTGCTAGACAGATTTACCTTACATTTCCAGCTGAAAGTACTTTCACAGAACAGGAT
GTTTCAAACTACTTCAGCAAATATGGACCTGTTCAAGATGTTAGGATACCCTGCCAACAGAGCAGGATGTATGGATTTGTAACATTTGTATATGTTGAGACAGCCAAACA
TATTCTCTCAACTACAACAACTCATTTTGTATGTGGAGCTCAAGTTCTTGTTAAACCTTACAAGGAAAAATCTAAGCTTTCCCAGAGAAAGAATGTAGAGAAACCACCAC
CTCCTTTATGTTACCTTCAGAATTACATGGAAGGAGACTTGGAAGAATCAAAATATGGAAATGAAGAAATGCAGGTGTTTTCATCAACTGAACAGCAGCTGCATGAATTG
CTGGATTCTTGTACTGAACATCCTGTTGATAGGGAAGGTGTAAATAAAAGATATGATGTATCTTGCAGAGTGGAGGAAGAAGTTTTAGAG
Protein sequenceShow/hide protein sequence
MRLNGVDFSVKKKINKKRKKMEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDLGITQMAAPVPASAPTLSSVSISDPNLQFSS
YTRAPSSRQLLPHSTFPLQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSRNLE
NLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIYLTFPAESTFTEQD
VSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLEESKYGNEEMQVFSSTEQQLHEL
LDSCTEHPVDREGVNKRYDVSCRVEEEVLE