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Lsi10G000620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G000620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:1069260..1071237
RNA-Seq ExpressionLsi10G000620
SyntenyLsi10G000620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604899.1 hypothetical protein SDJN03_02216, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3791.58Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV
        MATLF+K    V RGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQA VFDFQPKDPEDIQVALAALSGKAVPG V
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV

XP_022948039.1 uncharacterized protein LOC111451737 [Cucurbita moschata]1.2e-3791.58Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV
        MATLF+K    V RGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQA VFDFQPKDPEDIQVALAALSGKAVPG V
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV

XP_038901412.1 uncharacterized protein LOC120088292 isoform X2 [Benincasa hispida]4.9e-3991.58Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV
        MA+LFTK PP VAR GDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSS +SRSQA VFDFQPKDPEDIQVALAALSGKAVPG V
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV

XP_038901414.1 uncharacterized protein LOC120088292 isoform X3 [Benincasa hispida]4.1e-3892.39Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVP
        MA+LFTK PP VAR GDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSS +SRSQA VFDFQPKDPEDIQVALAALSGKAVP
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVP

XP_038901415.1 uncharacterized protein LOC120088292 isoform X4 [Benincasa hispida]4.1e-3892.39Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVP
        MA+LFTK PP VAR GDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSS +SRSQA VFDFQPKDPEDIQVALAALSGKAVP
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVP

TrEMBL top hitse value%identityAlignment
A0A1S3C2U2 uncharacterized protein LOC1034960281.3e-3789.58Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIA-PSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV
        MATLFTKS P V R GDGVYVAAVPLRATKGPAQLLASAAYSFNIWD QHFMVIIA PSSPTS SQA VFDFQPKDPEDIQVALAALSGK VPG V
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIA-PSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV

A0A5A7UDH8 Uncharacterized protein3.8e-3788.54Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIA-PSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV
        MATLFTKS P V R GDGVYVAAVPLRATKGPAQLLASAAYSFNIWD QHFMVIIA PSSP+S SQA VFDFQPKDPEDIQVALAALSGK VPG V
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIA-PSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV

A0A5D3CK24 Uncharacterized protein1.3e-3789.58Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIA-PSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV
        MATLFTKS P V R GDGVYVAAVPLRATKGPAQLLASAAYSFNIWD QHFMVIIA PSSPTS SQA VFDFQPKDPEDIQVALAALSGK VPG V
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIA-PSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV

A0A6J1G8N3 uncharacterized protein LOC1114517375.8e-3891.58Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV
        MATLF+K    V RGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQA VFDFQPKDPEDIQVALAALSGKAVPG V
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV

A0A6J1I2F2 uncharacterized protein LOC1114698846.4e-3789.47Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV
        M TLF+K    V RGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAP SPTSRSQA VFDFQPKDPEDIQVALAALSGKAVPG V
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04790.1 unknown protein5.6e-2557.89Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV
        MA+LFT SP   +  GD +YVAAVPL+A  GP QL+ S AYS NI +LQHFMV+I PSSP  R +  VFDFQP++PE I+ A++ LSG  +PG V
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV

AT2G04790.2 unknown protein5.6e-2557.89Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV
        MA+LFT SP   +  GD +YVAAVPL+A  GP QL+ S AYS NI +LQHFMV+I PSSP  R +  VFDFQP++PE I+ A++ LSG  +PG V
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV

AT2G04790.3 unknown protein7.3e-2558.06Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPG
        MA+LFT SP   +  GD +YVAAVPL+A  GP QL+ S AYS NI +LQHFMV+I PSSP  R +  VFDFQP++PE I+ A++ LSG  +PG
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPG

AT2G04790.4 unknown protein7.3e-2558.06Show/hide
Query:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPG
        MA+LFT SP   +  GD +YVAAVPL+A  GP QL+ S AYS NI +LQHFMV+I PSSP  R +  VFDFQP++PE I+ A++ LSG  +PG
Subjt:  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTCTATTCACAAAATCGCCGCCGGTGGTGGCAAGAGGCGGAGATGGTGTGTATGTGGCGGCTGTGCCATTAAGAGCCACAAAAGGCCCTGCCCAACTGCTTGC
TTCTGCTGCTTACTCTTTCAACATCTGGGATTTGCAGCATTTCATGGTTATCATCGCACCCTCCTCCCCAACTTCTCGCTCTCAGGCCTGGGTTTTTGATTTTCAACCTA
AAGATCCGGAAGATATACAAGTGGCACTGGCTGCTCTTTCTGGAAAAGCAGTTCCAGGTCCGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTCTATTCACAAAATCGCCGCCGGTGGTGGCAAGAGGCGGAGATGGTGTGTATGTGGCGGCTGTGCCATTAAGAGCCACAAAAGGCCCTGCCCAACTGCTTGC
TTCTGCTGCTTACTCTTTCAACATCTGGGATTTGCAGCATTTCATGGTTATCATCGCACCCTCCTCCCCAACTTCTCGCTCTCAGGCCTGGGTTTTTGATTTTCAACCTA
AAGATCCGGAAGATATACAAGTGGCACTGGCTGCTCTTTCTGGAAAAGCAGTTCCAGGTCCGGTGTAATTGTGTGATTTGGTGTTAGGAGTTGTTCGTGAGAGGAAGTTG
TCAAGGCTGCCAAAAAACAAATGTTCATACGTGGGATATTCGAATGCCAATGCCGTAGAAGTAGCACGTAAGTTCAACGGAAGTTGGGATACTAATTTGAGGATTGGTCT
TCATGACTGTAGAGACTATACAAATGGCTTGGTTGAGGCTCTGCTTGGTGAAGAAAATGTGTTGGAGCGCCTAAGGCAGAATTCTTTAAGCATTTAATAATGTACAATTC
ATGAATCTATCATTTTGATGTCACTTGGTTTACTCTGGATTGTTGCTTTTCTGGAACAATATGAATGTATCACTGGTCCGAAATTGTAAATTCTTCTGATATTAAAAGTA
GCAACAGAATTTTCTCTCCACTGGCCTAAA
Protein sequenceShow/hide protein sequence
MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV