; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G000730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G000730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF1664 domain-containing protein
Genome locationchr10:1241795..1260292
RNA-Seq ExpressionLsi10G000730
SyntenyLsi10G000730
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012458 - Domain of unknown function DUF1664
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR015157 - Translation machinery associated TMA7
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053256.1 DUF1664 domain-containing protein [Cucumis melo var. makuwa]1.0e-13989.37Show/hide
Query:  MALQ-TGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSR-GNYASYL
        MALQ  GVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVT+EE++PSPYKYDT+VLAAQIRQLTQEIRELTLSGPVTVFNGNSS  GNYASYL
Subjt:  MALQ-TGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSR-GNYASYL

Query:  VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH
        VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH
Subjt:  VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH

Query:  QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEV
        QMVSQLEGKLE LERKQ++TNSGLWYLCQAA GV+ RISEKLFPEVEAKKIAT+KYEENPLKGLQFIADTKDS        VK NS D++N EKV V   
Subjt:  QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEV

Query:  R
        R
Subjt:  R

XP_004138605.1 uncharacterized protein LOC101208062 isoform X2 [Cucumis sativus]6.0e-14089.7Show/hide
Query:  MALQ-TGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGN-SSRGNYASYL
        MALQ  GVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEE+SPSPYKYDT+VLAAQIRQLTQEIRELTLSGPVTVFNGN SS GNYASYL
Subjt:  MALQ-TGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGN-SSRGNYASYL

Query:  VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH
        VPAAAVGAMGYCYMWWKGLSFSD+MFVTKQNMANAVSTVSKQLD+VHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVK NLSQIGFDVETIH
Subjt:  VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH

Query:  QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEV
        QMVSQLEGKLEVLERKQ++TNSGLWYLCQAA GVK RISEKLFPEVEAKKIAT+KYEENPLKGLQFIADTKDS        VK NS +++N EKVAV   
Subjt:  QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEV

Query:  R
        R
Subjt:  R

XP_008455957.1 PREDICTED: uncharacterized protein LOC103496021 [Cucumis melo]4.6e-14089.7Show/hide
Query:  MALQ-TGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSR-GNYASYL
        MALQ  GVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVT+EE+SPSPYKYDT+VLAAQIRQLTQEIRELTLSGPVTVFNGNSS  GNYASYL
Subjt:  MALQ-TGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSR-GNYASYL

Query:  VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH
        VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH
Subjt:  VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH

Query:  QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEV
        QMVSQLEGKLE LERKQ++TNSGLWYLCQAA GV+ RISEKLFPEVEAKKIAT+KYEENPLKGLQFIADTKDS        VK NS D++N EKV V   
Subjt:  QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEV

Query:  R
        R
Subjt:  R

XP_022140737.1 uncharacterized protein LOC111011327 [Momordica charantia]1.0e-13987.13Show/hide
Query:  MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGN-SSRGNYASYLV
        MALQ GVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTE E+SPSP+KYDT++LAAQIRQL QEIRELTLSGPVTVFNGN SS GNY+SYLV
Subjt:  MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGN-SSRGNYASYLV

Query:  PAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQ
        PAAAVGAMGYCYMWWKG SFSDIMFVTKQNMANAVSTVSKQL+HVHEALASTRRHLTK+LENLDW+LDEEIETTNLIANNVE+VKSNLS+IGFDVETIHQ
Subjt:  PAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQ

Query:  MVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIA---TIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVL
        MVSQLEGKLEVLE+KQDITNSGLWYLCQ AG VKDRI++KLFPEVEAKK A   TIKYEEN LKGLQFIA+TK STV A P GVKGNS +K+NSE++AV 
Subjt:  MVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIA---TIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVL

Query:  EVR
          R
Subjt:  EVR

XP_038901102.1 uncharacterized protein LOC120088108 [Benincasa hispida]4.6e-15696.66Show/hide
Query:  MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSRGNYASYLVP
        MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDT+VLAAQIRQLTQEIRELTLSGPVTVFNGNSS GNYASYLVP
Subjt:  MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSRGNYASYLVP

Query:  AAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQM
        AAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVE+VKSNLSQIGFDVETIHQM
Subjt:  AAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQM

Query:  VSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEVR
        VSQLEGKLE LERKQDITNSGLWYLCQAAGGVKDRISEK FPE+EAKKIATIKYEENPLKGLQFIADTKDSTV AMPNGVKGNSFDKYNSEKVAV   R
Subjt:  VSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEVR

TrEMBL top hitse value%identityAlignment
A0A1S3C234 uncharacterized protein LOC1034960212.2e-14089.7Show/hide
Query:  MALQ-TGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSR-GNYASYL
        MALQ  GVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVT+EE+SPSPYKYDT+VLAAQIRQLTQEIRELTLSGPVTVFNGNSS  GNYASYL
Subjt:  MALQ-TGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSR-GNYASYL

Query:  VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH
        VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH
Subjt:  VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH

Query:  QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEV
        QMVSQLEGKLE LERKQ++TNSGLWYLCQAA GV+ RISEKLFPEVEAKKIAT+KYEENPLKGLQFIADTKDS        VK NS D++N EKV V   
Subjt:  QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEV

Query:  R
        R
Subjt:  R

A0A5A7UGB0 DUF1664 domain-containing protein4.9e-14089.37Show/hide
Query:  MALQ-TGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSR-GNYASYL
        MALQ  GVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVT+EE++PSPYKYDT+VLAAQIRQLTQEIRELTLSGPVTVFNGNSS  GNYASYL
Subjt:  MALQ-TGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSR-GNYASYL

Query:  VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH
        VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH
Subjt:  VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH

Query:  QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEV
        QMVSQLEGKLE LERKQ++TNSGLWYLCQAA GV+ RISEKLFPEVEAKKIAT+KYEENPLKGLQFIADTKDS        VK NS D++N EKV V   
Subjt:  QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEV

Query:  R
        R
Subjt:  R

A0A5D3BTB5 DUF1664 domain-containing protein2.2e-14089.7Show/hide
Query:  MALQ-TGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSR-GNYASYL
        MALQ  GVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVT+EE+SPSPYKYDT+VLAAQIRQLTQEIRELTLSGPVTVFNGNSS  GNYASYL
Subjt:  MALQ-TGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSR-GNYASYL

Query:  VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH
        VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH
Subjt:  VPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH

Query:  QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEV
        QMVSQLEGKLE LERKQ++TNSGLWYLCQAA GV+ RISEKLFPEVEAKKIAT+KYEENPLKGLQFIADTKDS        VK NS D++N EKV V   
Subjt:  QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEV

Query:  R
        R
Subjt:  R

A0A6J1CHX0 uncharacterized protein LOC1110113274.9e-14087.13Show/hide
Query:  MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGN-SSRGNYASYLV
        MALQ GVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTE E+SPSP+KYDT++LAAQIRQL QEIRELTLSGPVTVFNGN SS GNY+SYLV
Subjt:  MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGN-SSRGNYASYLV

Query:  PAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQ
        PAAAVGAMGYCYMWWKG SFSDIMFVTKQNMANAVSTVSKQL+HVHEALASTRRHLTK+LENLDW+LDEEIETTNLIANNVE+VKSNLS+IGFDVETIHQ
Subjt:  PAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQ

Query:  MVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIA---TIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVL
        MVSQLEGKLEVLE+KQDITNSGLWYLCQ AG VKDRI++KLFPEVEAKK A   TIKYEEN LKGLQFIA+TK STV A P GVKGNS +K+NSE++AV 
Subjt:  MVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIA---TIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVL

Query:  EVR
          R
Subjt:  EVR

A0A6J1I0X1 uncharacterized protein LOC1114698381.1e-13986.47Show/hide
Query:  MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGN-SSRGNYASYLV
        MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEE++SP+PYKYDT+VLAAQIRQL QEIRELT+SGPVTVFNGN SS GNYASYLV
Subjt:  MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGN-SSRGNYASYLV

Query:  PAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQ
        PAAAVGAMGYCYMWWKG SFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTR HLTK+LE LDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQ
Subjt:  PAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQ

Query:  MVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFP---EVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVL
        MVSQLEGKLEVLE+KQDITNSGLWYLCQAAG  KDRI++KLFP    ++AKK ATIKYEEN LKGLQFIA+TK++++ A+PNGVKGNS D  NS+K+ V 
Subjt:  MVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFP---EVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVL

Query:  EVR
          R
Subjt:  EVR

SwissProt top hitse value%identityAlignment
B7P877 Nuclear cap-binding protein subunit 21.7e-4166.67Show/hide
Query:  LSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFD
        LS YRD+ F+G++ E E  L+ STT+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCFV YY+RED E+A++Y++GT LDDR IR D+D
Subjt:  LSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFD

Query:  WGFQDGRQWGRGRSGGQ
         GF +GRQ+GRG+SGGQ
Subjt:  WGFQDGRQWGRGRSGGQ

P52298 Nuclear cap-binding protein subunit 28.7e-4166.95Show/hide
Query:  KLSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G++KKIIMGLDK  KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQ
        D GF++GRQ+GRGRSGGQ
Subjt:  DWGFQDGRQWGRGRSGGQ

Q3ZBJ1 Nuclear cap-binding protein subunit 28.7e-4166.95Show/hide
Query:  KLSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G++KKIIMGLDK  KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQ
        D GF++GRQ+GRGRSGGQ
Subjt:  DWGFQDGRQWGRGRSGGQ

Q84L14 Nuclear cap-binding protein subunit 21.9e-5954.66Show/hide
Query:  KDPAKLSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPI
        KDP KLS YRDRRF GTQ+E+E ALQ S TVYVGNMSFYTTEEQ YELFSRAGE++KIIMGLDKNSKTPCGFCF+LYYSRED EDAVKYISGT+LDDRPI
Subjt:  KDPAKLSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPI

Query:  RVDFDWGFQDGRQWGRGRSGGQ--------------ALCRQSCLSMENMVEATDMG--------------------------------------------
        RVDFDWGF++GRQWGRGRSGGQ                 +     +E   E  D G                                            
Subjt:  RVDFDWGFQDGRQWGRGRSGGQ--------------ALCRQSCLSMENMVEATDMG--------------------------------------------

Query:  --------IVMVEEKNPRFRESGDSDEEDDDDRKQR
                  +  EKNPRFRE GDSDEEDDD  K+R
Subjt:  --------IVMVEEKNPRFRESGDSDEEDDDDRKQR

Q9XFD1 Nuclear cap-binding protein subunit 23.5e-5851Show/hide
Query:  KDPAKLSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPI
        K+ AKLS YRDRRF GTQ+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGE+KKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTILDDRPI
Subjt:  KDPAKLSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPI

Query:  RVDFDWGFQDGRQWGRGRSGGQA-----------------LCRQSCLSMENMVE----------------------------------------------
        RVDFDWGFQ+GRQWGRGRSGGQ                  L ++   +   +V+                                              
Subjt:  RVDFDWGFQDGRQWGRGRSGGQA-----------------LCRQSCLSMENMVE----------------------------------------------

Query:  ------------------ATDMGIVMVEEKNPRFRESGDSDEEDDDDRKQR
                            D    M  EKNPRFRESGDSD++ +DDRK+R
Subjt:  ------------------ATDMGIVMVEEKNPRFRESGDSDEEDDDDRKQR

Arabidopsis top hitse value%identityAlignment
AT1G04960.1 Protein of unknown function (DUF1664)2.4e-8658.78Show/hide
Query:  MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSRGNYASYLVP
        MA+Q GV TSKVLIL+GAG++GS+VLR GRLSDLI+QLQ+LL G   + +  +P+KYD ++LAAQIRQL  EI+ELT++ PVT+FNG+S+   YASYLVP
Subjt:  MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSRGNYASYLVP

Query:  AAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQM
        AAAVGAMGYCYMWWKG SFSD MFVTK+NMA+AV++VSKQLD + + LASTR+HL++KL  LDW+++E+ ET+ +I ++V E++S++SQIGFD + +++M
Subjt:  AAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQM

Query:  VSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEEN-PLKGLQFIADTK-DSTVIAMP
        +S +EGK+E LE KQD+T SGLW+LCQ A GVKD  S K+F +V  +     K   N  L GL+F+ + K D+ VI  P
Subjt:  VSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEEN-PLKGLQFIADTK-DSTVIAMP

AT1G04960.2 Protein of unknown function (DUF1664)4.8e-7957.47Show/hide
Query:  GLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSRGNYASYLVPAAAVGAMGYCYMWWKGLS
        G++GS+VLR GRLSDLI+QLQ+LL G   + +  +P+KYD ++LAAQIRQL  EI+ELT++ PVT+FNG+S+   YASYLVPAAAVGAMGYCYMWWKG S
Subjt:  GLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSRGNYASYLVPAAAVGAMGYCYMWWKGLS

Query:  FSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQMVSQLEGKLEVLERKQDIT
        FSD MFVTK+NMA+AV++VSKQLD + + LASTR+HL++KL  LDW+++E+ ET+ +I ++V E++S++SQIGFD + +++M+S +EGK+E LE KQD+T
Subjt:  FSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQMVSQLEGKLEVLERKQDIT

Query:  NSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEEN-PLKGLQFIADTK-DSTVIAMP
         SGLW+LCQ A GVKD  S K+F +V  +     K   N  L GL+F+ + K D+ VI  P
Subjt:  NSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEEN-PLKGLQFIADTK-DSTVIAMP

AT1G27000.1 Protein of unknown function (DUF1664)1.7e-5239.7Show/hide
Query:  MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSRGNYASYLVP
        MA+Q GV  S++ +L GAG TG++++++G+LSDL+ +LQ L+KG+ +           +  +AAQ+R+L  EIR+L     +TV NG S   N  +  VP
Subjt:  MALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGNSSRGNYASYLVP

Query:  AAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQM
        AAA+GA+GY YMWWKGLSF+D+M+VTK NMA AV+ ++K L+ V E LA+ +RHLT++++NLD +++++I+ +  I + V   + N+S +  D+E++H +
Subjt:  AAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIHQM

Query:  VSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIAD
        ++ L+GKL+ LE KQD+TN  +  L    GG   ++ E    ++   + A     +   KGL+ +A+
Subjt:  VSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIAD

AT5G44200.1 CAP-binding protein 202.5e-5951Show/hide
Query:  KDPAKLSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPI
        K+ AKLS YRDRRF GTQ+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGE+KKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTILDDRPI
Subjt:  KDPAKLSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPI

Query:  RVDFDWGFQDGRQWGRGRSGGQA-----------------LCRQSCLSMENMVE----------------------------------------------
        RVDFDWGFQ+GRQWGRGRSGGQ                  L ++   +   +V+                                              
Subjt:  RVDFDWGFQDGRQWGRGRSGGQA-----------------LCRQSCLSMENMVE----------------------------------------------

Query:  ------------------ATDMGIVMVEEKNPRFRESGDSDEEDDDDRKQR
                            D    M  EKNPRFRESGDSD++ +DDRK+R
Subjt:  ------------------ATDMGIVMVEEKNPRFRESGDSDEEDDDDRKQR

AT5G44200.2 CAP-binding protein 202.5e-5951Show/hide
Query:  KDPAKLSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPI
        K+ AKLS YRDRRF GTQ+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGE+KKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTILDDRPI
Subjt:  KDPAKLSVYRDRRFQGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPI

Query:  RVDFDWGFQDGRQWGRGRSGGQA-----------------LCRQSCLSMENMVE----------------------------------------------
        RVDFDWGFQ+GRQWGRGRSGGQ                  L ++   +   +V+                                              
Subjt:  RVDFDWGFQDGRQWGRGRSGGQA-----------------LCRQSCLSMENMVE----------------------------------------------

Query:  ------------------ATDMGIVMVEEKNPRFRESGDSDEEDDDDRKQR
                            D    M  EKNPRFRESGDSD++ +DDRK+R
Subjt:  ------------------ATDMGIVMVEEKNPRFRESGDSDEEDDDDRKQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGTAATCGAGGACATTCCTTCCCCATTTCCCAGCGCGCGAAAAAGCAACGGCTTGTGAAGATGGCATTACAAACTGGGGTTTCAACCTCCAAGGTTCTCATCCT
CGTTGGAGCAGGGTTAACTGGTTCTGTTGTTTTAAGAAGTGGGCGATTGTCTGATCTGATATCACAACTTCAGGAATTACTTAAGGGTGTGACTGAGGAAGAAATCTCTC
CTAGCCCTTACAAGTATGATACTTCCGTTCTTGCTGCACAGATTCGGCAACTGACACAAGAGATCAGGGAGTTGACATTATCTGGTCCTGTAACTGTCTTCAATGGGAAC
TCTTCTAGAGGGAATTATGCTTCTTACTTAGTACCTGCAGCTGCCGTTGGAGCAATGGGATATTGCTACATGTGGTGGAAGGGATTGTCATTTTCTGACATAATGTTTGT
GACAAAGCAAAACATGGCAAATGCTGTCTCGACTGTCTCGAAACAACTGGATCACGTGCATGAAGCACTGGCTTCAACAAGGAGGCATCTGACAAAGAAGTTGGAGAACT
TGGACTGGAGGCTGGATGAGGAGATTGAAACAACAAATCTCATCGCAAATAATGTGGAGGAGGTTAAGTCCAACCTTTCTCAGATTGGTTTTGATGTTGAAACAATCCAT
CAAATGGTCTCACAATTGGAAGGAAAACTCGAGGTTCTTGAAAGGAAACAGGACATCACAAATTCTGGTCTCTGGTATCTATGTCAAGCTGCGGGAGGTGTCAAAGACCG
CATAAGTGAAAAACTCTTCCCAGAAGTTGAGGCAAAGAAGATTGCAACGATTAAATATGAGGAGAATCCCCTCAAGGGACTGCAGTTCATTGCTGATACTAAAGACTCCA
CTGTCATTGCAATGCCAAATGGAGTGAAGGGAAATAGCTTTGACAAATACAATAGTGAAAAAGTTGCAGTTCTTGAAGTTCGGACAGTTTACGAGGGTCTTTGGCAGCGC
TTTGCGCTATTTCCGAAGAGCCGGTTGTGCTACTTTGCGAGCCGTCAATTGCCGCCCACAGGCGATCCCTCTTTGTGCTCTTCGACTCGGCCAAACCCTCTTGATATCTC
AGCCATGTCGTCCAAGCAAGGAGCGAAAGCAAAGCCTCTGAAGCAACCTAAGGCTGATAAGAAAGATTATGACGAGGTTGATCTGGCCAATATTCAAAAGAAGAAAGACG
AGGAAAAGGACCCAGCAAAGCTATCTGTTTATCGGGATAGAAGATTTCAGGGAACACAAGATGAATTTGAAGTCGCGCTCCAGACTTCAACCACTGTTTACGTGGGAAAT
ATGTCCTTTTATACAACAGAAGAGCAAGTTTATGAGCTTTTTTCTCGAGCTGGAGAACTTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACACCTTGTGGCTT
TTGTTTTGTCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATTCGTGTGGATTTTGATTGGGGATTTC
AGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGCTCTATGCCGCCAGTCATGCCTCAGTATGGAAAACATGGTGGAAGCCACGGACATGGGCATCGTCATG
GTAGAGGAGAAGAATCCAAGGTTCCGGGAGAGTGGTGATTCTGATGAAGAGGATGACGATGACCGAAAGCAGCGACACTAA
mRNA sequenceShow/hide mRNA sequence
GAAAAGTATTGGAGCCATAGAGAATTTAAGCATGGAGAAGCATGAGAGAGTGAGAAATCAATTGGGAAACAAGAACAAATCAGATGAAAAGGCAACGAGGTCAGCTTGGA
AATTTGCCATAAATGAATGAAAGGTAATCGAGGACATTCCTTCCCCATTTCCCAGCGCGCGAAAAAGCAACGGCTTGTGAAGATGGCATTACAAACTGGGGTTTCAACCT
CCAAGGTTCTCATCCTCGTTGGAGCAGGGTTAACTGGTTCTGTTGTTTTAAGAAGTGGGCGATTGTCTGATCTGATATCACAACTTCAGGAATTACTTAAGGGTGTGACT
GAGGAAGAAATCTCTCCTAGCCCTTACAAGTATGATACTTCCGTTCTTGCTGCACAGATTCGGCAACTGACACAAGAGATCAGGGAGTTGACATTATCTGGTCCTGTAAC
TGTCTTCAATGGGAACTCTTCTAGAGGGAATTATGCTTCTTACTTAGTACCTGCAGCTGCCGTTGGAGCAATGGGATATTGCTACATGTGGTGGAAGGGATTGTCATTTT
CTGACATAATGTTTGTGACAAAGCAAAACATGGCAAATGCTGTCTCGACTGTCTCGAAACAACTGGATCACGTGCATGAAGCACTGGCTTCAACAAGGAGGCATCTGACA
AAGAAGTTGGAGAACTTGGACTGGAGGCTGGATGAGGAGATTGAAACAACAAATCTCATCGCAAATAATGTGGAGGAGGTTAAGTCCAACCTTTCTCAGATTGGTTTTGA
TGTTGAAACAATCCATCAAATGGTCTCACAATTGGAAGGAAAACTCGAGGTTCTTGAAAGGAAACAGGACATCACAAATTCTGGTCTCTGGTATCTATGTCAAGCTGCGG
GAGGTGTCAAAGACCGCATAAGTGAAAAACTCTTCCCAGAAGTTGAGGCAAAGAAGATTGCAACGATTAAATATGAGGAGAATCCCCTCAAGGGACTGCAGTTCATTGCT
GATACTAAAGACTCCACTGTCATTGCAATGCCAAATGGAGTGAAGGGAAATAGCTTTGACAAATACAATAGTGAAAAAGTTGCAGTTCTTGAAGTTCGGACAGTTTACGA
GGGTCTTTGGCAGCGCTTTGCGCTATTTCCGAAGAGCCGGTTGTGCTACTTTGCGAGCCGTCAATTGCCGCCCACAGGCGATCCCTCTTTGTGCTCTTCGACTCGGCCAA
ACCCTCTTGATATCTCAGCCATGTCGTCCAAGCAAGGAGCGAAAGCAAAGCCTCTGAAGCAACCTAAGGCTGATAAGAAAGATTATGACGAGGTTGATCTGGCCAATATT
CAAAAGAAGAAAGACGAGGAAAAGGACCCAGCAAAGCTATCTGTTTATCGGGATAGAAGATTTCAGGGAACACAAGATGAATTTGAAGTCGCGCTCCAGACTTCAACCAC
TGTTTACGTGGGAAATATGTCCTTTTATACAACAGAAGAGCAAGTTTATGAGCTTTTTTCTCGAGCTGGAGAACTTAAGAAGATAATCATGGGTTTGGATAAGAATTCAA
AAACACCTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATTCGTGTGGAT
TTTGATTGGGGATTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGCTCTATGCCGCCAGTCATGCCTCAGTATGGAAAACATGGTGGAAGCCACGGA
CATGGGCATCGTCATGGTAGAGGAGAAGAATCCAAGGTTCCGGGAGAGTGGTGATTCTGATGAAGAGGATGACGATGACCGAAAGCAGCGACACTAACACTGCTTTTCTT
ATAATGTGAGGAATCATTTACATGGGTGTTTTGTAGTTCAGCACAAAGTGATAAGGGACAAGTTCGTTACTTAGGCATGTCAAAACTAACGAGTTATTATTTTTTCATGC
CACTAGGTACTTTGTTCTTTCTTTAATGAAGGAATGACTATAAATAGCTGTCTGTACTGTGTATTATTATAAGTATCAAGTAGACATTTTGTCGGAAATGTCTTTAGAAA
AATGAAGAATCCAATTGTCTTCCAAGTACTTTAAGGAAGTGTGTGTATTTTTTTTGGATGTATACCAGAAAGCATTTGCTTGCTCGACATGGACGCGGGTTGGAAGGAAT
GCTGTTGGTATGTAAAAATGTGAAATTTATCGAGTTATTTCCTGTAATTCAATGTTGATTCATCAACTCTCACAAGATTTGTGCCATTTAGAAATGCTTTCAAATTTGAT
TGAATTGTGGGCTGGTGGGATTGTAAAAGTGATTTAGTCAACTAATTTGATGTAATAGGGAAAGGTCAACCGGAGGCCTGAATTGTGAAATAATTGTATGGAGGTCCCTA
TAATATGAAAAGTAACCCAAAACTAATGAAATTTAGGCTTCTGTTGATGTCATTGTCCAGTGAAATTACTACC
Protein sequenceShow/hide protein sequence
MKGNRGHSFPISQRAKKQRLVKMALQTGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEEISPSPYKYDTSVLAAQIRQLTQEIRELTLSGPVTVFNGN
SSRGNYASYLVPAAAVGAMGYCYMWWKGLSFSDIMFVTKQNMANAVSTVSKQLDHVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKSNLSQIGFDVETIH
QMVSQLEGKLEVLERKQDITNSGLWYLCQAAGGVKDRISEKLFPEVEAKKIATIKYEENPLKGLQFIADTKDSTVIAMPNGVKGNSFDKYNSEKVAVLEVRTVYEGLWQR
FALFPKSRLCYFASRQLPPTGDPSLCSSTRPNPLDISAMSSKQGAKAKPLKQPKADKKDYDEVDLANIQKKKDEEKDPAKLSVYRDRRFQGTQDEFEVALQTSTTVYVGN
MSFYTTEEQVYELFSRAGELKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQALCRQSCLSMENMVEATDMGIVM
VEEKNPRFRESGDSDEEDDDDRKQRH