; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G000940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G000940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr10:1517396..1518406
RNA-Seq ExpressionLsi10G000940
SyntenyLsi10G000940
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063642.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.8e-15888.05Show/hide
Query:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF
        MNIGRTKTS+ LLNFH FL Q S       SQTLQ+SIKAAVESKSYKKLP LFPSLQEACHNPNLFLFLS FP+NLRTQVVDEILQSLI +RPR +SQF
Subjt:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF

Query:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSPFPLSLPVLQRILHS CVP+PQTH LLSSAWLKQRSQ+KSVANILMDMQSIGYKPDSNICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT
        GCVPDLESYGTLI AATA+RRTDKAVELLKEMVVKVKL PRQ TIINVVAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLEC EYILAGKV 
Subjt:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT

Query:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS
        M MT RGFIPYIKVRQKVVEGL GIGE ELASAVRRRFVEL S
Subjt:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS

XP_004139374.1 pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativus]3.2e-16289.21Show/hide
Query:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF
        MNIGRTKTS+ LLNFH FL QYS       SQTLQ+SIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLS FP+NLRTQVVDEILQSLISIRPR +SQF
Subjt:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF

Query:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSPFPLSLPVLQRILHS CVP+PQTH LLSSAWLKQRSQ+KSVANILMDMQSIGYKPDSNICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT
        GC+PDLESYGTLI AATA+RRTDKAVELLKEMVVKVKL PRQGTI NVVAALR NREVRRAVEIIELLE++SH+VGFESYELLVEGCLEC EYILAGKVT
Subjt:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT

Query:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS
        MGMT RGFIPYIKVRQ+VVEGLAGIGE ELASAVRRRFVEL S
Subjt:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS

XP_008455557.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo]1.1e-15787.76Show/hide
Query:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF
        MNIGRTKTS+ LLNFH FL Q S       SQTLQ+SIKAAVESKSYKKLP LFPSLQEACHNPNLFLFLS FP+NLRTQVVDEILQSLI +RPR +SQF
Subjt:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF

Query:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSPFPLSLPVLQRILHS CVP+PQTH LLSSAWLKQRS +KSVANILMDMQSIGYKPDSNICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT
        GCVPDLESYGTLI AATA+RRTDKAVELLKEMVVKVKL PRQ TIINVVAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLEC EYILAGKV 
Subjt:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT

Query:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS
        M MT RGFIPYIKVRQKVVEGL GIGE ELASAVRRRFVEL S
Subjt:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS

XP_022971046.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima]5.2e-15283.38Show/hide
Query:  MNIGRTKTSSLLLNFHKFLRQYSS-------QTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF
        M +G  +TSS LL+FH+FLR  SS       QTLQESIKAAVESKSYKKLPDLFPSLQEAC NPN F FLS FPVN RTQVVDEILQSLI +RPR R QF
Subjt:  MNIGRTKTSSLLLNFHKFLRQYSS-------QTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF

Query:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSP PLSLPVLQRILHS C P PQTHLLLSSAWLKQR QSKSVA+IL+DM+SIGY+PDS+ICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT
        GCVPDLESYGTLIS++TA+RRT +AVELLKEMVVKVKLTPR+GT+INVVAALRANRE+RRAVEIIELLEKES+NVGFESYE+LVEGCLEC EYILAGKV 
Subjt:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT

Query:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS
        MGMT++G+IPYI+VR KVVEGLAGIGE ELASAVRRRF EL+S
Subjt:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS

XP_038902935.1 pentatricopeptide repeat-containing protein At1g06270 [Benincasa hispida]2.3e-16390.09Show/hide
Query:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF
        MNIGRTKTS+ LL FHKFLRQYS       SQ LQESIKAAVESKSYKKLPDLFPSL+EACHNPNLFLFLS FPVN+RTQ+VDEILQSLISIRPR RSQF
Subjt:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF

Query:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA
        VHVSLLFYTLQ  SPFPLSLPVLQRILHS  VPAPQTHLLLSSAWLKQRSQSKSVANILMDM+SIGYKPDSNICNY+ISSLCA DELAEAFQVLKGMGGA
Subjt:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT
        GC PDLESYGTLISA TA+R+TDKAVELLKEMV+KVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEC EYILAGKVT
Subjt:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT

Query:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS
        MGMT+RGFIPYIKVRQKVVEGLAGIGE E ASAVRR+FV LKS
Subjt:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS

TrEMBL top hitse value%identityAlignment
A0A0A0LFL3 Uncharacterized protein1.6e-16289.21Show/hide
Query:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF
        MNIGRTKTS+ LLNFH FL QYS       SQTLQ+SIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLS FP+NLRTQVVDEILQSLISIRPR +SQF
Subjt:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF

Query:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSPFPLSLPVLQRILHS CVP+PQTH LLSSAWLKQRSQ+KSVANILMDMQSIGYKPDSNICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT
        GC+PDLESYGTLI AATA+RRTDKAVELLKEMVVKVKL PRQGTI NVVAALR NREVRRAVEIIELLE++SH+VGFESYELLVEGCLEC EYILAGKVT
Subjt:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT

Query:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS
        MGMT RGFIPYIKVRQ+VVEGLAGIGE ELASAVRRRFVEL S
Subjt:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS

A0A1S3C1B6 pentatricopeptide repeat-containing protein At1g062705.2e-15887.76Show/hide
Query:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF
        MNIGRTKTS+ LLNFH FL Q S       SQTLQ+SIKAAVESKSYKKLP LFPSLQEACHNPNLFLFLS FP+NLRTQVVDEILQSLI +RPR +SQF
Subjt:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF

Query:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSPFPLSLPVLQRILHS CVP+PQTH LLSSAWLKQRS +KSVANILMDMQSIGYKPDSNICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT
        GCVPDLESYGTLI AATA+RRTDKAVELLKEMVVKVKL PRQ TIINVVAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLEC EYILAGKV 
Subjt:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT

Query:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS
        M MT RGFIPYIKVRQKVVEGL GIGE ELASAVRRRFVEL S
Subjt:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS

A0A5D3D4C7 Pentatricopeptide repeat-containing protein1.4e-15888.05Show/hide
Query:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF
        MNIGRTKTS+ LLNFH FL Q S       SQTLQ+SIKAAVESKSYKKLP LFPSLQEACHNPNLFLFLS FP+NLRTQVVDEILQSLI +RPR +SQF
Subjt:  MNIGRTKTSSLLLNFHKFLRQYS-------SQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF

Query:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSPFPLSLPVLQRILHS CVP+PQTH LLSSAWLKQRSQ+KSVANILMDMQSIGYKPDSNICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT
        GCVPDLESYGTLI AATA+RRTDKAVELLKEMVVKVKL PRQ TIINVVAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLEC EYILAGKV 
Subjt:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT

Query:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS
        M MT RGFIPYIKVRQKVVEGL GIGE ELASAVRRRFVEL S
Subjt:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS

A0A6J1G5M7 pentatricopeptide repeat-containing protein At1g062703.6e-15182.51Show/hide
Query:  MNIGRTKTSSLLLNFHKFLRQYSS-------QTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF
        M +G  +TSS LL+FH+FLRQ SS       Q+LQESI+AAVESKSY+KLPDLFPSLQEAC NPN F FLS FPVN RT VVDEILQSLI +RPR R QF
Subjt:  MNIGRTKTSSLLLNFHKFLRQYSS-------QTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF

Query:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSP PLSLPVLQRILHS CVP PQTHLLLSS WLKQR QSKSVA+IL++M+SIGY+PDS+ICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT
        GCVPDLESYGTLIS++TA+RRT +AVELLKEMVVKVKLTPRQGT+INVVAALRANRE+RRAVEIIELLEKES+NVGFESYE+LVEGCLEC EYILAGKV 
Subjt:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT

Query:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS
        MGMT++G+IPYI+VR KVVEGLAGIGE ELASAVRRRF EL+S
Subjt:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS

A0A6J1I5P5 pentatricopeptide repeat-containing protein At1g062702.5e-15283.38Show/hide
Query:  MNIGRTKTSSLLLNFHKFLRQYSS-------QTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF
        M +G  +TSS LL+FH+FLR  SS       QTLQESIKAAVESKSYKKLPDLFPSLQEAC NPN F FLS FPVN RTQVVDEILQSLI +RPR R QF
Subjt:  MNIGRTKTSSLLLNFHKFLRQYSS-------QTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQF

Query:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSP PLSLPVLQRILHS C P PQTHLLLSSAWLKQR QSKSVA+IL+DM+SIGY+PDS+ICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT
        GCVPDLESYGTLIS++TA+RRT +AVELLKEMVVKVKLTPR+GT+INVVAALRANRE+RRAVEIIELLEKES+NVGFESYE+LVEGCLEC EYILAGKV 
Subjt:  GCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVT

Query:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS
        MGMT++G+IPYI+VR KVVEGLAGIGE ELASAVRRRF EL+S
Subjt:  MGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVELKS

SwissProt top hitse value%identityAlignment
Q940A6 Pentatricopeptide repeat-containing protein At4g19440, chloroplastic1.8e-0624.8Show/hide
Query:  IKAAVESKSYKK---LPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRL-RSQFVHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVP
        I + +E+ S  K   + DL  S   +  +      +  +  N +    + +L+ ++SI   + +  F  V  L   L S   F  +L  +  +L  +  P
Subjt:  IKAAVESKSYKK---LPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRL-RSQFVHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVP

Query:  APQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMV
               L S   K    SK++  +     + G+  D+   N L+  LC   +L EAF++ K + G GCV D  SY TLIS     ++ D+A   L EM 
Subjt:  APQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMV

Query:  VKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGC
        VK  L P   T   ++  L    +V  A++  +  ++        +Y ++++GC
Subjt:  VKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGC

Q9FMF6 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial3.3e-0824.55Show/hide
Query:  LSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAAT
        L+L VL  + +  C P   ++ +L   + K   +     N+L +M + G KP++   N LIS+ C    + EA ++ + M   GC PD+ ++ +LIS   
Subjt:  LSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAAT

Query:  ALRRTDKAVELLKEMVVK--VKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVR
         +     A+ LL++M+ +  V  T    T+IN   A     E++ A +++  +  +   +   +Y  L++G     E   A  +   M + G  P     
Subjt:  ALRRTDKAVELLKEMVVK--VKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVR

Query:  QKVVEGLAGIGEPELASAVRRRFV
          ++ GL   G  E A   ++  V
Subjt:  QKVVEGLAGIGEPELASAVRRRFV

Q9LFF1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic9.6e-0826.67Show/hide
Query:  KSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVK-VKLTPRQGTIINVVAA
        +  A ++  M   G KPD    N L++  C   ++ +A  +++ M   GC PD+ +YGTLIS      R + A +LL+ + +K + LTP       V+  
Subjt:  KSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVK-VKLTPRQGTIINVVAA

Query:  LRANREVRRAVEII-ELLEKESHNVGFESYELLVEG-CLECHEYILAGKVTMGMTKRGFIPYIKVRQKVVEGLAGIGEPE
        L   R+   A+ +  E+LE+        SY ++  G C        A    + + ++GF+P       + EGL  +   E
Subjt:  LRANREVRRAVEII-ELLEKESHNVGFESYELLVEG-CLECHEYILAGKVTMGMTKRGFIPYIKVRQKVVEGLAGIGEPE

Q9LNC0 Pentatricopeptide repeat-containing protein At1g062709.1e-9155Show/hide
Query:  FLRQYSS-QTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQFVHVSLLFYTLQSPSPFPLSLPVL
        F R  SS + ++++IK AVE+K Y ++P+L  SL+E   N  LF FLS F  + R +V+DEILQS + +RPR   + V+ SLL Y LQS  P PLS  +L
Subjt:  FLRQYSS-QTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQFVHVSLLFYTLQSPSPFPLSLPVL

Query:  QRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTD
        QR L S C+P PQTHLLLS AWL++R  S+SVA+I+ +M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+PD+ESYG +I++    R+T 
Subjt:  QRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTD

Query:  KAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVRQKVVEGLA
          V+++KEMV K  ++PR+G +  V AALRANRE+ +A+E+IE +E   + V FESYE++VEGCLE  EYILAGKV M MT RGFIPYIKVRQKVVE L 
Subjt:  KAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVRQKVVEGLA

Query:  GIGEPELASAVRRRFVELKS
         IGE +LA  VR+R  EL+S
Subjt:  GIGEPELASAVRRRFVELKS

Q9SZ52 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic6.7e-0925Show/hide
Query:  SLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATA
        ++ V +R++     P+ QT+  L    L +R    SV  +L +M+++G KP+       I  L    ++ EA+++LK M   GC PD+ +Y  LI A   
Subjt:  SLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATA

Query:  LRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVRQKV
         R+ D A E+ ++M    +  P + T I ++     NR++    +    +EK+ H     ++ +LV+   +   +  A      M  +G +P +     +
Subjt:  LRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVRQKV

Query:  VEGL
        + GL
Subjt:  VEGL

Arabidopsis top hitse value%identityAlignment
AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein6.4e-9255Show/hide
Query:  FLRQYSS-QTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQFVHVSLLFYTLQSPSPFPLSLPVL
        F R  SS + ++++IK AVE+K Y ++P+L  SL+E   N  LF FLS F  + R +V+DEILQS + +RPR   + V+ SLL Y LQS  P PLS  +L
Subjt:  FLRQYSS-QTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQFVHVSLLFYTLQSPSPFPLSLPVL

Query:  QRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTD
        QR L S C+P PQTHLLLS AWL++R  S+SVA+I+ +M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+PD+ESYG +I++    R+T 
Subjt:  QRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTD

Query:  KAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVRQKVVEGLA
          V+++KEMV K  ++PR+G +  V AALRANRE+ +A+E+IE +E   + V FESYE++VEGCLE  EYILAGKV M MT RGFIPYIKVRQKVVE L 
Subjt:  KAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVRQKVVEGLA

Query:  GIGEPELASAVRRRFVELKS
         IGE +LA  VR+R  EL+S
Subjt:  GIGEPELASAVRRRFVELKS

AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein6.8e-0926.67Show/hide
Query:  KSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVK-VKLTPRQGTIINVVAA
        +  A ++  M   G KPD    N L++  C   ++ +A  +++ M   GC PD+ +YGTLIS      R + A +LL+ + +K + LTP       V+  
Subjt:  KSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVK-VKLTPRQGTIINVVAA

Query:  LRANREVRRAVEII-ELLEKESHNVGFESYELLVEG-CLECHEYILAGKVTMGMTKRGFIPYIKVRQKVVEGLAGIGEPE
        L   R+   A+ +  E+LE+        SY ++  G C        A    + + ++GF+P       + EGL  +   E
Subjt:  LRANREVRRAVEII-ELLEKESHNVGFESYELLVEG-CLECHEYILAGKVTMGMTKRGFIPYIKVRQKVVEGLAGIGEPE

AT4G19440.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.3e-0724.8Show/hide
Query:  IKAAVESKSYKK---LPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRL-RSQFVHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVP
        I + +E+ S  K   + DL  S   +  +      +  +  N +    + +L+ ++SI   + +  F  V  L   L S   F  +L  +  +L  +  P
Subjt:  IKAAVESKSYKK---LPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRL-RSQFVHVSLLFYTLQSPSPFPLSLPVLQRILHSDCVP

Query:  APQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMV
               L S   K    SK++  +     + G+  D+   N L+  LC   +L EAF++ K + G GCV D  SY TLIS     ++ D+A   L EM 
Subjt:  APQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMV

Query:  VKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGC
        VK  L P   T   ++  L    +V  A++  +  ++        +Y ++++GC
Subjt:  VKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGC

AT4G31850.1 proton gradient regulation 34.7e-1025Show/hide
Query:  SLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATA
        ++ V +R++     P+ QT+  L    L +R    SV  +L +M+++G KP+       I  L    ++ EA+++LK M   GC PD+ +Y  LI A   
Subjt:  SLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATA

Query:  LRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVRQKV
         R+ D A E+ ++M    +  P + T I ++     NR++    +    +EK+ H     ++ +LV+   +   +  A      M  +G +P +     +
Subjt:  LRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVRQKV

Query:  VEGL
        + GL
Subjt:  VEGL

AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein2.3e-0924.55Show/hide
Query:  LSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAAT
        L+L VL  + +  C P   ++ +L   + K   +     N+L +M + G KP++   N LIS+ C    + EA ++ + M   GC PD+ ++ +LIS   
Subjt:  LSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAAT

Query:  ALRRTDKAVELLKEMVVK--VKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVR
         +     A+ LL++M+ +  V  T    T+IN   A     E++ A +++  +  +   +   +Y  L++G     E   A  +   M + G  P     
Subjt:  ALRRTDKAVELLKEMVVK--VKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVR

Query:  QKVVEGLAGIGEPELASAVRRRFV
          ++ GL   G  E A   ++  V
Subjt:  QKVVEGLAGIGEPELASAVRRRFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTGGAAGAACAAAAACTTCTTCATTGTTACTCAATTTCCATAAATTTTTGCGGCAATATTCATCACAAACCCTTCAAGAGAGCATTAAAGCTGCAGTTGAATC
AAAGTCGTATAAGAAACTTCCAGATTTGTTTCCTTCTTTGCAAGAAGCTTGCCATAACCCCAATCTTTTCTTGTTTCTCTCCAATTTTCCTGTTAACTTAAGAACACAAG
TTGTGGATGAGATATTGCAATCTTTAATATCTATTAGACCTCGTTTAAGATCCCAATTTGTCCATGTCTCTCTGCTTTTCTACACTCTTCAAAGCCCTTCACCCTTTCCC
CTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGATTGTGTCCCTGCCCCTCAGACCCACCTTCTCCTCTCTTCTGCCTGGCTAAAACAACGTAGTCAGTCTAAGTC
TGTTGCTAATATCTTGATGGATATGCAGTCGATTGGCTACAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTGCCATTGATGAATTAGCAGAGGCTT
TTCAAGTCTTGAAAGGTATGGGAGGGGCAGGATGTGTTCCTGACTTGGAGAGTTATGGCACCTTGATTAGTGCAGCAACAGCTCTTAGGCGGACGGACAAGGCAGTGGAA
TTGCTAAAAGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAATGTTGTGGCTGCTTTACGAGCAAACCGAGAGGTAAGGAGAGCAGTTGAGAT
TATTGAGCTGTTGGAGAAGGAGAGTCATAATGTTGGATTTGAGAGCTATGAGCTTCTCGTTGAAGGTTGTCTAGAGTGTCATGAGTATATTTTGGCGGGAAAGGTGACCA
TGGGGATGACGAAGAGAGGGTTTATACCATATATCAAGGTCAGGCAAAAGGTTGTTGAGGGGCTGGCTGGCATTGGAGAACCGGAACTTGCTTCTGCTGTAAGACGCAGA
TTTGTAGAGTTGAAGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATATTGGAAGAACAAAAACTTCTTCATTGTTACTCAATTTCCATAAATTTTTGCGGCAATATTCATCACAAACCCTTCAAGAGAGCATTAAAGCTGCAGTTGAATC
AAAGTCGTATAAGAAACTTCCAGATTTGTTTCCTTCTTTGCAAGAAGCTTGCCATAACCCCAATCTTTTCTTGTTTCTCTCCAATTTTCCTGTTAACTTAAGAACACAAG
TTGTGGATGAGATATTGCAATCTTTAATATCTATTAGACCTCGTTTAAGATCCCAATTTGTCCATGTCTCTCTGCTTTTCTACACTCTTCAAAGCCCTTCACCCTTTCCC
CTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGATTGTGTCCCTGCCCCTCAGACCCACCTTCTCCTCTCTTCTGCCTGGCTAAAACAACGTAGTCAGTCTAAGTC
TGTTGCTAATATCTTGATGGATATGCAGTCGATTGGCTACAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTGCCATTGATGAATTAGCAGAGGCTT
TTCAAGTCTTGAAAGGTATGGGAGGGGCAGGATGTGTTCCTGACTTGGAGAGTTATGGCACCTTGATTAGTGCAGCAACAGCTCTTAGGCGGACGGACAAGGCAGTGGAA
TTGCTAAAAGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAATGTTGTGGCTGCTTTACGAGCAAACCGAGAGGTAAGGAGAGCAGTTGAGAT
TATTGAGCTGTTGGAGAAGGAGAGTCATAATGTTGGATTTGAGAGCTATGAGCTTCTCGTTGAAGGTTGTCTAGAGTGTCATGAGTATATTTTGGCGGGAAAGGTGACCA
TGGGGATGACGAAGAGAGGGTTTATACCATATATCAAGGTCAGGCAAAAGGTTGTTGAGGGGCTGGCTGGCATTGGAGAACCGGAACTTGCTTCTGCTGTAAGACGCAGA
TTTGTAGAGTTGAAGTCTTAG
Protein sequenceShow/hide protein sequence
MNIGRTKTSSLLLNFHKFLRQYSSQTLQESIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSNFPVNLRTQVVDEILQSLISIRPRLRSQFVHVSLLFYTLQSPSPFP
LSLPVLQRILHSDCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMQSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVE
LLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECHEYILAGKVTMGMTKRGFIPYIKVRQKVVEGLAGIGEPELASAVRRR
FVELKS