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Lsi10G001110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G001110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncellulose synthase-like protein H1
Genome locationchr10:1723896..1724210
RNA-Seq ExpressionLsi10G001110
SyntenyLsi10G001110
Gene Ontology termsGO:0030244 - cellulose biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016760 - cellulose synthase (UDP-forming) activity (molecular function)
InterPro domainsIPR005150 - Cellulose synthase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570895.1 Cellulose synthase-like protein H1, partial [Cucurbita argyrosperma subsp. sororia]9.5e-2066.29Show/hide
Query:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLR-LVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR
        FEVTKKG S+ ND+ E+ ED G+FTFDES LFV ATTI+MIQL AL IGL R +     ++ +L VGEMICS WL LCFWPFLKGMFA+
Subjt:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLR-LVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR

XP_022944069.1 cellulose synthase-like protein H1 [Cucurbita moschata]1.9e-2066.29Show/hide
Query:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLR-LVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR
        FEVTKKG S+ ND+ E++ED G+FTFDES LFV ATTI+MIQL ALSIGL R +  +  ++ +L +GEMICS WL LCFWPFLKGMFA+
Subjt:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLR-LVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR

XP_023512253.1 cellulose synthase-like protein H1 [Cucurbita pepo subsp. pepo]1.1e-2066.29Show/hide
Query:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLR-LVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR
        FEVTKKGSS+ ND+ E++ED G+FTF+ES LF+ ATTI+MIQL ALSIGL R +     ++ +L +GEMICSAWL LCFWPFLKGMFA+
Subjt:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLR-LVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR

XP_038902591.1 cellulose synthase-like protein H1 isoform X1 [Benincasa hispida]8.9e-2675.28Show/hide
Query:  MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR
        MFEVTKKGSSS NDDGEMEEDS +FTFD+S LFV ATTIL+IQL ALSIGLLRLV    +++++ VGEMICS WL LCFWPFLKGM A+
Subjt:  MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR

XP_038902592.1 cellulose synthase-like protein H1 isoform X2 [Benincasa hispida]8.9e-2675.28Show/hide
Query:  MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR
        MFEVTKKGSSS NDDGEMEEDS +FTFD+S LFV ATTIL+IQL ALSIGLLRLV    +++++ VGEMICS WL LCFWPFLKGM A+
Subjt:  MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR

TrEMBL top hitse value%identityAlignment
A0A6J1CHE2 cellulose synthase-like protein H11.6e-1761.11Show/hide
Query:  MFEVTKKGSSSLNDD-GEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR
        MFEVTKK SSS +DD GE++EDSG FTFDES LFV  TT+LM+QL AL + + R        K  GVGE++CS WL  CFWPFLKGMF +
Subjt:  MFEVTKKGSSSLNDD-GEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR

A0A6J1CI91 cellulose synthase-like protein H11.4e-1660.67Show/hide
Query:  MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR
        +FEVTKK SSS N     + D G+ TFDES  FV  TTILMIQLAALSIGLL   G+  ++++ GVGE+ICS WL L FWPFLKG+F++
Subjt:  MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR

A0A6J1FVZ4 cellulose synthase-like protein H19.3e-2166.29Show/hide
Query:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLR-LVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR
        FEVTKKG S+ ND+ E++ED G+FTFDES LFV ATTI+MIQL ALSIGL R +  +  ++ +L +GEMICS WL LCFWPFLKGMFA+
Subjt:  FEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLR-LVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAR

A0A6J1G5N8 cellulose synthase-like protein H11.1e-1657.84Show/hide
Query:  FEVTKKGSSSLNDDGE-MEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAREDLKSLGQPCA
        FEVTKK S+S +DD E  + D G+FTFDES +FV  TTI+MIQLAALSIG L   G     ++ GVGE+ CS WL LCFWP LKGMFA+    S G P +
Subjt:  FEVTKKGSSSLNDDGE-MEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAREDLKSLGQPCA

Query:  SL
        +L
Subjt:  SL

A0A6J1I5D5 cellulose synthase-like protein H11.4e-1657.84Show/hide
Query:  FEVTKKGSSSLNDDGE-MEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAREDLKSLGQPCA
        FEVTKK S+S +DD E  + D G+FTFDES +FV  TTI+MIQLAALSIG L   G     ++ GVGE+ CS WL LCFWP LKGMFA+    S G P +
Subjt:  FEVTKKGSSSLNDDGE-MEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAREDLKSLGQPCA

Query:  SL
        +L
Subjt:  SL

SwissProt top hitse value%identityAlignment
Q339N5 Cellulose synthase-like protein H11.9e-0737.36Show/hide
Query:  MFEVTKKGSSSLNDDGEMEE-DSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKL----GVGEMICSAWLSLCFWPFLKGM
        +FEVT+K  S+ + D   +E + G+FTFDES +F+  T + M+ + A+++G  R+V  ++  + L    G+ E I   WL LCF P L+G+
Subjt:  MFEVTKKGSSSLNDDGEMEE-DSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKL----GVGEMICSAWLSLCFWPFLKGM

Q7PC71 Cellulose synthase-like protein H25.6e-0735.96Show/hide
Query:  MFEVTKKGSSSLNDDGEME-EDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIM--LLKKLGVGEMICSAWLSLCFWPFLKGM
        +FEVT K  S  +DD   +  D G+FTFD   +F+  T + M+ + A+++G  R+       +    G+GE +C  WL LCF+PF++G+
Subjt:  MFEVTKKGSSSLNDDGEME-EDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIM--LLKKLGVGEMICSAWLSLCFWPFLKGM

Q7XUT9 Cellulose synthase-like protein H25.6e-0735.96Show/hide
Query:  MFEVTKKGSSSLNDDGEME-EDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIM--LLKKLGVGEMICSAWLSLCFWPFLKGM
        +FEVT K  S  +DD   +  D G+FTFD   +F+  T + M+ + A+++G  R+       +    G+GE +C  WL LCF+PF++G+
Subjt:  MFEVTKKGSSSLNDDGEME-EDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIM--LLKKLGVGEMICSAWLSLCFWPFLKGM

Q7XUU0 Putative cellulose synthase-like protein H33.1e-0533.7Show/hide
Query:  MFEVTKKGSSSLNDDGEMEE-DSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIM--LLKKLGVGEMICSAWLSLCFWPFLKGMFAR
        +FEVT+K  S+ + +G+ +E D  +FTFD S +F+  T + M+ + A++IG  R V      +    G+ E +   WL LC  PF++G+  +
Subjt:  MFEVTKKGSSSLNDDGEMEE-DSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIM--LLKKLGVGEMICSAWLSLCFWPFLKGMFAR

Arabidopsis top hitse value%identityAlignment
AT2G32530.1 cellulose synthase-like B31.2e-0439.22Show/hide
Query:  MFEVTKK-------GSSSLNDDGEME---EDSGQFTFDESLLFVLATTILMIQLAAL---SIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMF
        +F VTKK       GS S     E++   +DSG+F FD SL F+  T IL++ LAAL   S+GL R  G        G+ E      + + F PFLKGMF
Subjt:  MFEVTKK-------GSSSLNDDGEME---EDSGQFTFDESLLFVLATTILMIQLAAL---SIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMF

Query:  AR
         +
Subjt:  AR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAGGTAACGAAGAAGGGATCGTCCTCTTTGAATGATGATGGTGAAATGGAGGAGGATTCTGGTCAATTCACATTCGATGAGTCTTTATTGTTCGTGCTAGCCAC
GACAATTTTGATGATTCAATTGGCGGCCCTTTCAATCGGTTTGTTGAGATTAGTGGGGCAAATCATGTTATTGAAGAAATTGGGGGTGGGGGAGATGATATGCAGTGCGT
GGTTGAGTTTGTGCTTTTGGCCATTTTTGAAGGGAATGTTTGCAAGGGAAGATTTGAAATCCCTTGGCCAACCTTGTGCAAGTCTATTGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAGGTAACGAAGAAGGGATCGTCCTCTTTGAATGATGATGGTGAAATGGAGGAGGATTCTGGTCAATTCACATTCGATGAGTCTTTATTGTTCGTGCTAGCCAC
GACAATTTTGATGATTCAATTGGCGGCCCTTTCAATCGGTTTGTTGAGATTAGTGGGGCAAATCATGTTATTGAAGAAATTGGGGGTGGGGGAGATGATATGCAGTGCGT
GGTTGAGTTTGTGCTTTTGGCCATTTTTGAAGGGAATGTTTGCAAGGGAAGATTTGAAATCCCTTGGCCAACCTTGTGCAAGTCTATTGCTTTGA
Protein sequenceShow/hide protein sequence
MFEVTKKGSSSLNDDGEMEEDSGQFTFDESLLFVLATTILMIQLAALSIGLLRLVGQIMLLKKLGVGEMICSAWLSLCFWPFLKGMFAREDLKSLGQPCASLLL