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Lsi10G001290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G001290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEC metallothionein-like protein
Genome locationchr10:1995845..1996177
RNA-Seq ExpressionLsi10G001290
SyntenyLsi10G001290
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000316 - Plant EC metallothionein-like protein, family 15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448405.1 PREDICTED: metallothionein-like protein 4A [Cucumis melo]5.3e-2974.19Show/hide
Query:  MAESGG--GRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAH-VTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRCET
        MAE GG  GRGGV ACNQSCGCAVPCPGGNACRC+TA+A   AGGE A+   C CGEHC CNPCTC    VGVGKGNCRCG++CRCE CRCE+
Subjt:  MAESGG--GRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAH-VTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRCET

XP_022140669.1 metallothionein-like protein 4A [Momordica charantia]4.1e-2976.14Show/hide
Query:  MAESG--GGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC
        MAE+G  GG GG+RACNQSCGCAVPCPGGNACRCATA     AGG+ AH  C CGEHCGCNPCTC SAV GVGK  C+CGENCRCE C
Subjt:  MAESG--GGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC

XP_022944284.1 metallothionein-like protein 4A [Cucurbita moschata]2.3e-3279.78Show/hide
Query:  MAESGGG-RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRC
        MAE GGG RGG+RACNQSCGCAVPCPGGNAC+CATA+    AGGE+AH  C CGEHCGC+PCTC SAVVGVGKG+CRCGE+CRCE CRC
Subjt:  MAESGGG-RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRC

XP_022985832.1 metallothionein-like protein 4B [Cucurbita maxima]8.7e-3278.65Show/hide
Query:  MAESGGG-RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRC
        MAE GGG RGG+RACNQ CGCAVPCPGGNAC+CATA+    AGGE+AH  C CGEHCGC+PCTC SAVVGVGKG+CRCGE+CRCE CRC
Subjt:  MAESGGG-RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRC

XP_023513130.1 metallothionein-like protein 4A [Cucurbita pepo subsp. pepo]8.7e-3277.78Show/hide
Query:  MAESGGG--RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRC
        MAE GGG  RGG+RACNQSCGCAVPCPGGNAC+CATA+    AGGE+AH  C CGEHCGC+PCTC SAVVGVG+G CRCGE+CRCE CRC
Subjt:  MAESGGG--RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRC

TrEMBL top hitse value%identityAlignment
A0A1S3BJL5 metallothionein-like protein 4A2.6e-2974.19Show/hide
Query:  MAESGG--GRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAH-VTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRCET
        MAE GG  GRGGV ACNQSCGCAVPCPGGNACRC+TA+A   AGGE A+   C CGEHC CNPCTC    VGVGKGNCRCG++CRCE CRCE+
Subjt:  MAESGG--GRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAH-VTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRCET

A0A5D3CS48 Metallothionein-like protein 4A2.6e-2974.19Show/hide
Query:  MAESGG--GRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAH-VTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRCET
        MAE GG  GRGGV ACNQSCGCAVPCPGGNACRC+TA+A   AGGE A+   C CGEHC CNPCTC    VGVGKGNCRCG++CRCE CRCE+
Subjt:  MAESGG--GRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAH-VTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRCET

A0A6J1CGB3 metallothionein-like protein 4A2.0e-2976.14Show/hide
Query:  MAESG--GGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC
        MAE+G  GG GG+RACNQSCGCAVPCPGGNACRCATA     AGG+ AH  C CGEHCGCNPCTC SAV GVGK  C+CGENCRCE C
Subjt:  MAESG--GGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC

A0A6J1FWF6 metallothionein-like protein 4A1.1e-3279.78Show/hide
Query:  MAESGGG-RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRC
        MAE GGG RGG+RACNQSCGCAVPCPGGNAC+CATA+    AGGE+AH  C CGEHCGC+PCTC SAVVGVGKG+CRCGE+CRCE CRC
Subjt:  MAESGGG-RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRC

A0A6J1J5Z9 metallothionein-like protein 4B4.2e-3278.65Show/hide
Query:  MAESGGG-RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRC
        MAE GGG RGG+RACNQ CGCAVPCPGGNAC+CATA+    AGGE+AH  C CGEHCGC+PCTC SAVVGVGKG+CRCGE+CRCE CRC
Subjt:  MAESGGG-RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRC

SwissProt top hitse value%identityAlignment
P30569 EC protein I/II2.0e-1550.62Show/hide
Query:  CNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVG----KGNCRCGENCRCEPCRCET
        C+  CGCAVPCPGG  CRC +A + A AG    H TC CGEHCGCNPC C       G    + NC CG  C C  C   T
Subjt:  CNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVG----KGNCRCGENCRCEPCRCET

P30570 EC protein III4.1e-1651.85Show/hide
Query:  CNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVG----KGNCRCGENCRCEPCRCET
        CN  CGCAVPCPGG  CRC +A + A AG    H TC CGEHCGCNPC C       G    + NC CG  C C  C   T
Subjt:  CNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVG----KGNCRCGENCRCEPCRCET

P43401 EC protein homolog4.1e-1650.65Show/hide
Query:  CNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVG----KGNCRCGENCRCEPC
        C+  CGCAVPCPGG  CRC + S     GG+  H TC CGEHC C+PCTC  A +  G    + NC CG +C C  C
Subjt:  CNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVG----KGNCRCGENCRCEPC

P93746 Metallothionein-like protein 4A2.2e-1750Show/hide
Query:  MAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC
        MA++G G   V  CN SCGC  PCPGGN+CRC    A A   G+  H+ C CGEHCGCNPC C           C CGE C C  C
Subjt:  MAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC

Q42377 Metallothionein-like protein 4B5.4e-1647.67Show/hide
Query:  MAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC
        MA++G G     +CN  CGC  PCPGG +CRC   S    +GG+  H TC CGEHCGCNPC C           C CGE C C  C
Subjt:  MAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC

Arabidopsis top hitse value%identityAlignment
AT2G23240.1 Plant EC metallothionein-like protein, family 153.8e-1747.67Show/hide
Query:  MAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC
        MA++G G     +CN  CGC  PCPGG +CRC   S    +GG+  H TC CGEHCGCNPC C           C CGE C C  C
Subjt:  MAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC

AT2G23240.2 Plant EC metallothionein-like protein, family 151.9e-1646.51Show/hide
Query:  MAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC
        MA++G G     +CN  CGC  PCPGG +CR   + A   +GG+  H TC CGEHCGCNPC C           C CGE C C  C
Subjt:  MAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC

AT2G42000.1 Plant EC metallothionein-like protein, family 159.1e-1946.74Show/hide
Query:  IEIINNMAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC
        + +   MA++G G   V  CN SCGC  PCPGGN+CRC    A A   G+  H+ C CGEHCGCNPC C           C CGE C C  C
Subjt:  IEIINNMAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC

AT2G42000.2 Plant EC metallothionein-like protein, family 159.1e-1946.74Show/hide
Query:  IEIINNMAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC
        + +   MA++G G   V  CN SCGC  PCPGGN+CRC    A A   G+  H+ C CGEHCGCNPC C           C CGE C C  C
Subjt:  IEIINNMAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACTAATCGGACGGAAAAGGAGAAGAGAGTTGACGGAATAGAGATAATTAATAATATGGCAGAATCAGGCGGCGGCAGAGGCGGAGTCAGGGCTTGCAAC
CAGAGCTGTGGTTGCGCAGTTCCCTGCCCCGGCGGCAACGCTTGTAGGTGCGCGACGGCCTCGGCACCGGCGCCGGCGGGAGGAGAGATGGCGCACGTGACATGC
TCGTGCGGGGAGCACTGTGGGTGCAATCCCTGCACGTGTTCCAGCGCGGTGGTTGGAGTTGGGAAGGGTAACTGCAGGTGCGGCGAGAATTGTCGGTGTGAACCG
TGCCGGTGTGAAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACTAATCGGACGGAAAAGGAGAAGAGAGTTGACGGAATAGAGATAATTAATAATATGGCAGAATCAGGCGGCGGCAGAGGCGGAGTCAGGGCTTGCAAC
CAGAGCTGTGGTTGCGCAGTTCCCTGCCCCGGCGGCAACGCTTGTAGGTGCGCGACGGCCTCGGCACCGGCGCCGGCGGGAGGAGAGATGGCGCACGTGACATGC
TCGTGCGGGGAGCACTGTGGGTGCAATCCCTGCACGTGTTCCAGCGCGGTGGTTGGAGTTGGGAAGGGTAACTGCAGGTGCGGCGAGAATTGTCGGTGTGAACCG
TGCCGGTGTGAAACATGA
Protein sequenceShow/hide protein sequence
MKTNRTEKEKRVDGIEIINNMAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEP
CRCET