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Lsi10G001350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G001350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionThiF domain-containing protein
Genome locationchr10:2126448..2126840
RNA-Seq ExpressionLsi10G001350
SyntenyLsi10G001350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022944248.1 uncharacterized protein LOC111448755 [Cucurbita moschata]6.2e-4575.38Show/hide
Query:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST
        M R VQFS K+ ANR EQFHKYLKPGALA++RDS+ISA+  R+NSLSQIYLR T+  ESSPLS+ GQSEID VD FPSL+ RVYGPLCLKRKK +  KST
Subjt:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
        WFPSPNLQTPT DL+ D IID FNSDVAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
XP_022986202.1 uncharacterized protein LOC111484017 [Cucurbita maxima]2.1e-4575.38Show/hide
Query:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST
        M R VQ S K+ ANR EQFHK+LKPGALA+MRDS+ISA+  R+NSLSQI+LR T+ LESSPLS  GQSEID VD FPSL+ RVYGPLCLKRKK A  K+T
Subjt:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
        WFPSPNLQTPTTDLT D I+D FNSDVAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
XP_023513131.1 uncharacterized protein LOC111777660 [Cucurbita pepo subsp. pepo]9.3e-4980Show/hide
Query:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST
        M R VQFS K+ ANR EQFHKYLKPGALA+MRDS+ISA+  R+NSLSQIYLR T+ LESSPLS  GQSEID VD FPSLA RVYGPLCLKRKK A  KST
Subjt:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
        WFPSPNLQTPTTDLT +PIID FNSDVAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
XP_030481732.1 uncharacterized protein LOC115698726 [Cannabis sativa]1.8e-2051.15Show/hide
Query:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST
        M R  +   +   NR E F KYLKPGALAQ+RDS+ISA+  RF S++QI     S   SSP ST GQS +  +DGFP  + R++ P C +RKK  A KS 
Subjt:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST

Query:  WFPSPNLQTPTTDLTRDPIIDVF-NSDVAAH
         FPS N  +P  D   DPIIDVF +SD+AAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVF-NSDVAAH
XP_038902395.1 uncharacterized protein LOC120089036 [Benincasa hispida]1.1e-5282.31Show/hide
Query:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST
        MKR ++FSPK YA+R EQFHKYLKPGALAQMRDSQISAK  RFNSLSQIYLR TS L SSPLST GQSEID+VD FPSLA R YGP CLKRKK AA K+T
Subjt:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
        WFPSPNLQTPTTD+TRDP++DVFNSDVAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
TrEMBL top hitse value%identityAlignment
A0A1Q3BG14 Uncharacterized protein2.2e-1946.46Show/hide
Query:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST
        M   ++F  ++   + E + KYLKPGALA++RDS+ISA+  R NSL QI L H S   SSP S  GQ+ ++  D FP  A RVYGP C +RKK  A K+ 
Subjt:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDV
         F + + QT     + DPIID+F+SD+
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDV
A0A2P5EE91 Uncharacterized protein1.2e-2048.46Show/hide
Query:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST
        M R  +   +   +R E F KYLKPGALAQ+RDS+ISA+  R  SL+QI    +S   S P ST GQ  +  +DGFP  + RV+GP C +RKK  A K+ 
Subjt:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
         FPS N  +P  D   DPI+DVF++D+AAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
A0A6J1FXV4 uncharacterized protein LOC1114487553.0e-4575.38Show/hide
Query:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST
        M R VQFS K+ ANR EQFHKYLKPGALA++RDS+ISA+  R+NSLSQIYLR T+  ESSPLS+ GQSEID VD FPSL+ RVYGPLCLKRKK +  KST
Subjt:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
        WFPSPNLQTPT DL+ D IID FNSDVAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
A0A6J1J6X7 uncharacterized protein LOC1114840171.0e-4575.38Show/hide
Query:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST
        M R VQ S K+ ANR EQFHK+LKPGALA+MRDS+ISA+  R+NSLSQI+LR T+ LESSPLS  GQSEID VD FPSL+ RVYGPLCLKRKK A  K+T
Subjt:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
        WFPSPNLQTPTTDLT D I+D FNSDVAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
A0A6P3Z351 uncharacterized protein LOC1074089611.7e-1949.62Show/hide
Query:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST
        M R  +   +   NR E F K+LKPGALAQ+RDS+ISA+  R  SL QI     +   SSP ST GQ   + +DGFP  + R+YGP C +RKK  A KS 
Subjt:  MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSD-VAAH
         FPS N  +P  D + DP+IDVF++D VAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSD-VAAH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G26960.1 unknown protein5.5e-0736.36Show/hide
Query:  RSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRF---NSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKS
        + +  SP R   R + FH+Y+KPGALAQ+R+++I+     F    SLS      +S  E SP++ T Q+    +D  P L  ++YGP  + RKK    +S
Subjt:  RSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRF---NSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKS

Query:  TWF---PSPN
              PSPN
Subjt:  TWF---PSPN
AT5G54970.1 unknown protein6.3e-1137.3Show/hide
Query:  KRYANRKEQFHKYLKPGALAQMRDSQISAKG----IRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKS-TWFPS
        K  A R + FH+YLKPGALAQ+R+S+I+A+     +  +SLSQ+ +   S  E+S       S    +D  P L R++YGP   +RKK AA +S +    
Subjt:  KRYANRKEQFHKYLKPGALAQMRDSQISAKG----IRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKS-TWFPS

Query:  PNLQTPTTDLTRDPIIDVFNSDVAAH
         N+  P   +  +P     +SDV AH
Subjt:  PNLQTPTTDLTRDPIIDVFNSDVAAH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGCAGTGTTCAATTCTCTCCCAAACGATATGCAAATCGCAAGGAACAATTTCACAAGTACTTGAAGCCCGGTGCCTTAGCGCAGATGCGAGACTCTCAAATCAG
CGCCAAAGGGATCCGATTCAACTCGCTCTCTCAGATCTACCTCCGCCATACTTCTCTTCTTGAGTCGTCTCCACTTTCCACTACCGGTCAATCGGAGATCGACATGGTCG
ATGGTTTCCCTTCTTTGGCTCGAAGGGTTTATGGTCCCTTGTGCCTTAAGAGGAAGAAGCATGCGGCGTTTAAGTCTACATGGTTTCCGAGCCCTAATTTGCAGACTCCA
ACTACCGATTTAACTCGAGACCCGATTATTGATGTGTTTAATAGCGATGTTGCTGCGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACGCAGTGTTCAATTCTCTCCCAAACGATATGCAAATCGCAAGGAACAATTTCACAAGTACTTGAAGCCCGGTGCCTTAGCGCAGATGCGAGACTCTCAAATCAG
CGCCAAAGGGATCCGATTCAACTCGCTCTCTCAGATCTACCTCCGCCATACTTCTCTTCTTGAGTCGTCTCCACTTTCCACTACCGGTCAATCGGAGATCGACATGGTCG
ATGGTTTCCCTTCTTTGGCTCGAAGGGTTTATGGTCCCTTGTGCCTTAAGAGGAAGAAGCATGCGGCGTTTAAGTCTACATGGTTTCCGAGCCCTAATTTGCAGACTCCA
ACTACCGATTTAACTCGAGACCCGATTATTGATGTGTTTAATAGCGATGTTGCTGCGCATTGA
Protein sequenceShow/hide protein sequence
MKRSVQFSPKRYANRKEQFHKYLKPGALAQMRDSQISAKGIRFNSLSQIYLRHTSLLESSPLSTTGQSEIDMVDGFPSLARRVYGPLCLKRKKHAAFKSTWFPSPNLQTP
TTDLTRDPIIDVFNSDVAAH