; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G001360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G001360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:2140824..2141273
RNA-Seq ExpressionLsi10G001360
SyntenyLsi10G001360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570883.1 hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia]8.2e-4974.19Show/hide
Query:  MGNNCFKSNKVMAQDEPDDLL---PPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDG---GVLRIKVVMSQKELK
        MGN+CFKSNKVMAQDE    L   PP+EAKKVE+KP +GSAMAKPKTAE R+G AAGKKVVRFKL+EE+E    SGGSGGDG   GVLRIKVVMSQ+ELK
Subjt:  MGNNCFKSNKVMAQDEPDDLL---PPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDG---GVLRIKVVMSQKELK

Query:  QILKDRENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEGLH
        QILK+ EN+S +LEELIAE KVKGRT +SD   DEVEDE GS +P LECIPEGLH
Subjt:  QILKDRENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEGLH

KGN63254.1 hypothetical protein Csa_022493 [Cucumis sativus]3.8e-3866.23Show/hide
Query:  MGNNCFKSNKVMAQDEPDDLLPP---MEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQIL
        MGN CFKSNKVMAQD+  D  PP   +E KKV+Q+P  GSAMAKPK     TGGAAGKKVVRF L+EEE++E+         GVLRIKVV+SQKELKQIL
Subjt:  MGNNCFKSNKVMAQDEPDDLLPP---MEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQIL

Query:  KDRENNSCTLEELIAELKVKGR-TRISDGRMDEVEDEKGSWKPDLECIPEG
        K RENNSC+LEELI ELKVKGR T +S        DE GSWKP LECIPEG
Subjt:  KDRENNSCTLEELIAELKVKGR-TRISDGRMDEVEDEKGSWKPDLECIPEG

TYK24218.1 hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa]7.2e-3765.13Show/hide
Query:  MGNNCFKSNKVMAQDEPDDLLPP---MEAKKVEQKP-PSGSAMAKPKTAEARTGGAAGKKVVRFKL-EEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQ
        MGN CF++NKVMAQD+  D LPP   +EA+KVE++P   GSAMAKPK     TGGAAGKKVVRF L EEEE++E  + G     GVLRIKVV+SQKELK+
Subjt:  MGNNCFKSNKVMAQDEPDDLLPP---MEAKKVEQKP-PSGSAMAKPKTAEARTGGAAGKKVVRFKL-EEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQ

Query:  ILKDRENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEG
        ILK+RENNSC+LEELI ELKVKGR          V DE GSWKP LECIPEG
Subjt:  ILKDRENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEG

XP_022140639.1 uncharacterized protein LOC111011249 [Momordica charantia]2.2e-3362Show/hide
Query:  NCFKSNKVMAQDEPDDLLPPMEAK----KVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKD
        NC ++N+VMAQDE     P         KVE KP +GSA+A+PKT EAR   A  KKVVRF+  E+E        SGG GGVLRIKVV+SQKELKQILKD
Subjt:  NCFKSNKVMAQDEPDDLLPPMEAK----KVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKD

Query:  RENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEGLH
        RE+NS TLEEL+AELK+KGRT ISD R D  EDE GSW+P LE IPE LH
Subjt:  RENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEGLH

XP_038902397.1 uncharacterized protein LOC120089037 [Benincasa hispida]1.8e-5682.99Show/hide
Query:  MGNNCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDR
        MGNNCFKSNKVMAQDEP+DLLPP+EAKKVE+KP  GSAMAKPKTAEARTGGA+ KKVVRFKL+EEEE+      + GDGGVLRIKVVMSQKELKQ+LKDR
Subjt:  MGNNCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDR

Query:  ENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEG
        ENNSCTLEELI ELKVKGRT ISDGR+D VEDE G WKPDLE IPEG
Subjt:  ENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEG

TrEMBL top hitse value%identityAlignment
A0A0A0LQE9 Uncharacterized protein1.8e-3866.23Show/hide
Query:  MGNNCFKSNKVMAQDEPDDLLPP---MEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQIL
        MGN CFKSNKVMAQD+  D  PP   +E KKV+Q+P  GSAMAKPK     TGGAAGKKVVRF L+EEE++E+         GVLRIKVV+SQKELKQIL
Subjt:  MGNNCFKSNKVMAQDEPDDLLPP---MEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQIL

Query:  KDRENNSCTLEELIAELKVKGR-TRISDGRMDEVEDEKGSWKPDLECIPEG
        K RENNSC+LEELI ELKVKGR T +S        DE GSWKP LECIPEG
Subjt:  KDRENNSCTLEELIAELKVKGR-TRISDGRMDEVEDEKGSWKPDLECIPEG

A0A4V3WQ11 Uncharacterized protein2.3e-1239.33Show/hide
Query:  NCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKL-EEEEEEEKISGGSGGD------GGVLRIKVVMSQKELKQI
        NC  SNK++ QDE D+   P E + +E+                R      KK VRFKL EEEEEEE+   G+G +      GG +RI+VV++Q+EL +I
Subjt:  NCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKL-EEEEEEEKISGGSGGD------GGVLRIKVVMSQKELKQI

Query:  LKDRENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPE
        L  +   S ++E+++ E+K+K R +IS  R  + E   GSW+P LE IPE
Subjt:  LKDRENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPE

A0A5D3DKZ8 Uncharacterized protein3.5e-3765.13Show/hide
Query:  MGNNCFKSNKVMAQDEPDDLLPP---MEAKKVEQKP-PSGSAMAKPKTAEARTGGAAGKKVVRFKL-EEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQ
        MGN CF++NKVMAQD+  D LPP   +EA+KVE++P   GSAMAKPK     TGGAAGKKVVRF L EEEE++E  + G     GVLRIKVV+SQKELK+
Subjt:  MGNNCFKSNKVMAQDEPDDLLPP---MEAKKVEQKP-PSGSAMAKPKTAEARTGGAAGKKVVRFKL-EEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQ

Query:  ILKDRENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEG
        ILK+RENNSC+LEELI ELKVKGR          V DE GSWKP LECIPEG
Subjt:  ILKDRENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEG

A0A6J1CG85 uncharacterized protein LOC1110112491.0e-3362Show/hide
Query:  NCFKSNKVMAQDEPDDLLPPMEAK----KVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKD
        NC ++N+VMAQDE     P         KVE KP +GSA+A+PKT EAR   A  KKVVRF+  E+E        SGG GGVLRIKVV+SQKELKQILKD
Subjt:  NCFKSNKVMAQDEPDDLLPPMEAK----KVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKD

Query:  RENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEGLH
        RE+NS TLEEL+AELK+KGRT ISD R D  EDE GSW+P LE IPE LH
Subjt:  RENNSCTLEELIAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEGLH

A0A7N2MA05 Uncharacterized protein1.9e-1143.15Show/hide
Query:  NCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKP-KTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDREN
        NC  SNK +AQ+E      P EA+ VEQ  PS ++  +P K  +   G    KKVVRFKLEE++     S       GV+RI+VV++QKELKQIL  +E 
Subjt:  NCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKP-KTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDREN

Query:  -NSCTLEELIAELKVKGRTRISDGR-MDEVEDEKGSWKPDLECIPE
            ++E+L+  L ++GR +IS+ R  DE E    +W+P LE IPE
Subjt:  -NSCTLEELIAELKVKGRTRISDGR-MDEVEDEKGSWKPDLECIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21680.1 unknown protein2.8e-0732.41Show/hide
Query:  NCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDRENN
        NC + +  +A+ E DDL P    K +E+                      GK   R + E E   E+       +  V+RIKVV+++KEL+QIL   +N 
Subjt:  NCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDRENN

Query:  SCTLEELIAELKVKGRTRISDGRMDEVEDEKG--SWKPDLECIPE
          ++++L+  LK  GR  IS    +E E E+G  +W+P LE IPE
Subjt:  SCTLEELIAELKVKGRTRISDGRMDEVEDEKG--SWKPDLECIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATAACTGTTTCAAAAGCAACAAAGTGATGGCGCAAGACGAGCCTGATGATCTTTTGCCTCCGATGGAAGCTAAGAAAGTTGAGCAAAAACCGCCGTCTGGATC
GGCGATGGCGAAGCCGAAGACGGCAGAGGCGAGAACCGGTGGTGCGGCCGGTAAGAAGGTAGTGAGGTTTAAGTTAGAAGAAGAAGAGGAGGAGGAGAAAATTTCCGGCG
GAAGTGGCGGCGATGGTGGAGTATTGAGGATTAAAGTGGTGATGTCTCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAGAACAATTCGTGTACATTGGAGGAATTG
ATTGCTGAATTGAAGGTGAAAGGCAGGACGAGGATTTCAGATGGGAGAATGGATGAAGTTGAAGATGAAAAAGGAAGCTGGAAGCCGGATCTGGAATGTATTCCTGAAGG
TCTCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATAACTGTTTCAAAAGCAACAAAGTGATGGCGCAAGACGAGCCTGATGATCTTTTGCCTCCGATGGAAGCTAAGAAAGTTGAGCAAAAACCGCCGTCTGGATC
GGCGATGGCGAAGCCGAAGACGGCAGAGGCGAGAACCGGTGGTGCGGCCGGTAAGAAGGTAGTGAGGTTTAAGTTAGAAGAAGAAGAGGAGGAGGAGAAAATTTCCGGCG
GAAGTGGCGGCGATGGTGGAGTATTGAGGATTAAAGTGGTGATGTCTCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAGAACAATTCGTGTACATTGGAGGAATTG
ATTGCTGAATTGAAGGTGAAAGGCAGGACGAGGATTTCAGATGGGAGAATGGATGAAGTTGAAGATGAAAAAGGAAGCTGGAAGCCGGATCTGGAATGTATTCCTGAAGG
TCTCCATTAA
Protein sequenceShow/hide protein sequence
MGNNCFKSNKVMAQDEPDDLLPPMEAKKVEQKPPSGSAMAKPKTAEARTGGAAGKKVVRFKLEEEEEEEKISGGSGGDGGVLRIKVVMSQKELKQILKDRENNSCTLEEL
IAELKVKGRTRISDGRMDEVEDEKGSWKPDLECIPEGLH