; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G001440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G001440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMelanoma inhibitory activity protein 3, putative
Genome locationchr10:2321330..2322767
RNA-Seq ExpressionLsi10G001440
SyntenyLsi10G001440
Gene Ontology termsGO:0010089 - xylem development (biological process)
InterPro domainsIPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043428.1 uncharacterized protein E6C27_scaffold1639G00370 [Cucumis melo var. makuwa]4.7e-5673.56Show/hide
Query:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT
        MEKSVYSS  QFPH LPSFPSS A ESGWTAYLD+PSDDDT +T+PTSSLLSDAASHA     AAA PP  LT+HLKIPTKLILKPKQ HFFVDTSLEDT
Subjt:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT

Query:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD
        ASSPDNSPK    L  +  +        GN +KYR DHER+LE+ FKRKA+EYTDLKKRGLCLVPLSM  NYLD
Subjt:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD

KAG7034965.1 hypothetical protein SDJN02_01758, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-4062.43Show/hide
Query:  MEKSVYSSTPQFPHSLPSFPSSAAA----ESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTS
        MEKSV SS  QFPH LPSF SS+AA    ES WTAYLDDPS DD YS   TSSLLSDAASHAA + SA   PPPPL+DHLKIP KL LKPK   FFVDTS
Subjt:  MEKSVYSSTPQFPHSLPSFPSSAAA----ESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTS

Query:  LEDTASSPDNSPKAS------------HKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYL
        LEDTASSPDNSPK +               L  GR MG         +KYR DHE K          EYTDLKKRGLCLVPLSM ANYL
Subjt:  LEDTASSPDNSPKAS------------HKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYL

XP_008455849.1 PREDICTED: uncharacterized protein LOC103495948 [Cucumis melo]2.1e-5674.14Show/hide
Query:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT
        MEKSVYSS  QFPH LPSFPSS A ESGWTAYLD+PSDDDT +TFPTSSLLSDAASHA     AAA PP  LT+HLKIPTKLILKPKQ HFFVDTSLEDT
Subjt:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT

Query:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD
        ASSPDNSPK    L  +  +        GN +KYR DHER+LE+ FKRKA+EYTDLKKRGLCLVPLSM  NYLD
Subjt:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD

XP_011650013.1 vascular-related unknown protein 1 [Cucumis sativus]1.1e-5573.56Show/hide
Query:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT
        MEKSVYSS  QFPH LPSFPSS A ESGWTAYLD PSDDDT +TFPTSSLLSDAASHA     AAA PP PLT+HL+ PTKLILKPKQ H FVDTSLEDT
Subjt:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT

Query:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD
        ASSPDNSPK    L  +  +        GN +KYR DHER+LE+SFKRKA+EYTDLKKRGLCLVPLSM  NYLD
Subjt:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD

XP_038902043.1 vascular-related unknown protein 1-like [Benincasa hispida]1.3e-6680.9Show/hide
Query:  MEKSVYSST-PQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFS-AAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLE
        MEKSVYSST PQFPH LPSF +SAAAESGWTAYLDDPSDDD   TFPTSSLLSDAASHAAC+FS AAADPPPPLTDHLKI TKLILKPKQTHFFVD SLE
Subjt:  MEKSVYSST-PQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFS-AAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLE

Query:  DTASSPDNSPKASHKLLVWGRSMGIIIEEK---GNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYL
        DTASSPDNSPK  H     G   G     K   GN +KYRGDHER LEMSFKRKATEYTDLKKRGLCLVPLSMF NY+
Subjt:  DTASSPDNSPKASHKLLVWGRSMGIIIEEK---GNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYL

TrEMBL top hitse value%identityAlignment
A0A0A0LQF7 Uncharacterized protein5.1e-5673.56Show/hide
Query:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT
        MEKSVYSS  QFPH LPSFPSS A ESGWTAYLD PSDDDT +TFPTSSLLSDAASHA     AAA PP PLT+HL+ PTKLILKPKQ H FVDTSLEDT
Subjt:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT

Query:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD
        ASSPDNSPK    L  +  +        GN +KYR DHER+LE+SFKRKA+EYTDLKKRGLCLVPLSM  NYLD
Subjt:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD

A0A1S3C201 uncharacterized protein LOC1034959481.0e-5674.14Show/hide
Query:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT
        MEKSVYSS  QFPH LPSFPSS A ESGWTAYLD+PSDDDT +TFPTSSLLSDAASHA     AAA PP  LT+HLKIPTKLILKPKQ HFFVDTSLEDT
Subjt:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT

Query:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD
        ASSPDNSPK    L  +  +        GN +KYR DHER+LE+ FKRKA+EYTDLKKRGLCLVPLSM  NYLD
Subjt:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD

A0A5A7TKT4 Uncharacterized protein2.3e-5673.56Show/hide
Query:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT
        MEKSVYSS  QFPH LPSFPSS A ESGWTAYLD+PSDDDT +T+PTSSLLSDAASHA     AAA PP  LT+HLKIPTKLILKPKQ HFFVDTSLEDT
Subjt:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT

Query:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD
        ASSPDNSPK    L  +  +        GN +KYR DHER+LE+ FKRKA+EYTDLKKRGLCLVPLSM  NYLD
Subjt:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD

A0A5D3BK94 Uncharacterized protein1.0e-5674.14Show/hide
Query:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT
        MEKSVYSS  QFPH LPSFPSS A ESGWTAYLD+PSDDDT +TFPTSSLLSDAASHA     AAA PP  LT+HLKIPTKLILKPKQ HFFVDTSLEDT
Subjt:  MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDT

Query:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD
        ASSPDNSPK    L  +  +        GN +KYR DHER+LE+ FKRKA+EYTDLKKRGLCLVPLSM  NYLD
Subjt:  ASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD

A0A6J1I137 Uncharacterized protein1.9e-3964.94Show/hide
Query:  MEKSVYSSTPQFPHSLPSFPSSAAA-ESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLED
        MEKSV SS  Q PH LPSF SS+AA ES WTAYLDDPS DD YS   TSSLLSDAASHAA + SA   PPPPL+DHLKIP KL LKPK   FFVDTSLED
Subjt:  MEKSVYSSTPQFPHSLPSFPSSAAA-ESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLED

Query:  TASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYL
        TASSPDNSPK +      G +        GN +K  G+  R  EM    K  EY DLKKRGLCLVPLSM ANYL
Subjt:  TASSPDNSPKASHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYL

SwissProt top hitse value%identityAlignment
Q56YT7 Vascular-related unknown protein 39.7e-0431.54Show/hide
Query:  ESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDTASSPDNSPKASHKLLVWGRSMGIII
        ES WT Y +    +D    +  SS++SDAAS   C                                     EDTASSP N  +       +       I
Subjt:  ESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDTASSPDNSPKASHKLLVWGRSMGIII

Query:  EEKGNEQKYRGDHERKLEMSFKRKATEY-TDLKKRGLCLVPLSMFANYL
        EEK       G  E K+      K  EY  +LKKRGLCLVPLSM +NY+
Subjt:  EEKGNEQKYRGDHERKLEMSFKRKATEY-TDLKKRGLCLVPLSMFANYL

Q9LSZ3 Vascular-related unknown protein 14.8e-1133.84Show/hide
Query:  HSLPSFPSSAAAESGWTAYLDDPS--------------DDDTYSTFPTS-SLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLIL-KPKQTHFFVDTSL
        H   S       ESGWT YLDD S              D  +YS   TS SL+SDAA+HA   FS  + P       +  P KL   + +      D SL
Subjt:  HSLPSFPSSAAAESGWTAYLDDPS--------------DDDTYSTFPTS-SLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLIL-KPKQTHFFVDTSL

Query:  EDTASSPDNSPKASH---------KLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKAT--------------EYTDLKKRGLCLVPLSMFANY
        EDTASSP NSPK SH         K+  +  S  ++   +G      GDH+ +++   ++K T                 DL+ RGLC+VP+SM AN+
Subjt:  EDTASSPDNSPKASH---------KLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKAT--------------EYTDLKKRGLCLVPLSMFANY

Arabidopsis top hitse value%identityAlignment
AT3G20557.1 unknown protein6.9e-0531.54Show/hide
Query:  ESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDTASSPDNSPKASHKLLVWGRSMGIII
        ES WT Y +    +D    +  SS++SDAAS   C                                     EDTASSP N  +       +       I
Subjt:  ESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDTASSPDNSPKASHKLLVWGRSMGIII

Query:  EEKGNEQKYRGDHERKLEMSFKRKATEY-TDLKKRGLCLVPLSMFANYL
        EEK       G  E K+      K  EY  +LKKRGLCLVPLSM +NY+
Subjt:  EEKGNEQKYRGDHERKLEMSFKRKATEY-TDLKKRGLCLVPLSMFANYL

AT3G21710.1 unknown protein2.5e-0740.87Show/hide
Query:  HSLPSFPSSAAAESGWTAYLDDPS--------------DDDTYSTFPTS-SLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLIL-KPKQTHFFVDTSL
        H   S       ESGWT YLDD S              D  +YS   TS SL+SDAA+HA   FS  + P       +  P KL   + +      D SL
Subjt:  HSLPSFPSSAAAESGWTAYLDDPS--------------DDDTYSTFPTS-SLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLIL-KPKQTHFFVDTSL

Query:  EDTASSPDNSPKASH
        EDTASSP NSPK SH
Subjt:  EDTASSPDNSPKASH

AT3G21710.2 unknown protein3.4e-1233.84Show/hide
Query:  HSLPSFPSSAAAESGWTAYLDDPS--------------DDDTYSTFPTS-SLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLIL-KPKQTHFFVDTSL
        H   S       ESGWT YLDD S              D  +YS   TS SL+SDAA+HA   FS  + P       +  P KL   + +      D SL
Subjt:  HSLPSFPSSAAAESGWTAYLDDPS--------------DDDTYSTFPTS-SLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLIL-KPKQTHFFVDTSL

Query:  EDTASSPDNSPKASH---------KLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKAT--------------EYTDLKKRGLCLVPLSMFANY
        EDTASSP NSPK SH         K+  +  S  ++   +G      GDH+ +++   ++K T                 DL+ RGLC+VP+SM AN+
Subjt:  EDTASSPDNSPKASH---------KLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKAT--------------EYTDLKKRGLCLVPLSMFANY

AT5G54790.1 unknown protein5.8e-0429.12Show/hide
Query:  MEKSVYSSTPQFPHSLPSFPSSA-AAESGWTAYLDD----PSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDT
        ME S+ ++     H    F       ES WT Y +D     S       F +SS +SDAAS  A + +            +K       + ++  F    
Subjt:  MEKSVYSSTPQFPHSLPSFPSSA-AAESGWTAYLDD----PSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDT

Query:  SLEDTASSPDNSPKASHKLLVWGRSM----GIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYL
         LEDTASSP  SP     + +   +     GI+           GD E+++  +   +     DLKK+GLCLVPLSM  N+L
Subjt:  SLEDTASSPDNSPKASHKLLVWGRSM----GIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAATCTGTTTATTCATCCACTCCACAATTCCCTCACTCATTGCCTTCCTTTCCCAGCTCCGCCGCCGCTGAAAGTGGCTGGACCGCCTATTTGGACGACCCCTC
CGACGACGACACCTACAGTACTTTCCCCACCTCCTCCTTGCTCTCTGACGCCGCTTCTCACGCTGCATGCCAATTCTCCGCCGCCGCCGACCCTCCACCTCCGCTCACCG
ACCACCTCAAAATCCCGACCAAGTTGATTCTCAAGCCTAAACAAACTCACTTTTTTGTCGATACTTCTCTTGAAGATACTGCCAGTTCTCCTGATAATAGCCCCAAGGCT
TCACACAAGTTGCTGGTTTGGGGCCGTTCGATGGGAATAATTATCGAAGAAAAAGGAAATGAACAGAAATATAGAGGAGATCATGAAAGAAAATTGGAGATGAGTTTTAA
AAGGAAGGCTACTGAATATACAGACTTGAAAAAAAGAGGATTGTGTTTGGTTCCTTTGTCCATGTTTGCAAATTATTTGGATTAG
mRNA sequenceShow/hide mRNA sequence
AAATCTCTCCCTTTTCTTTACCTCTCAACCCCCCAAATTTCATTTTATTAAAAAGCCCCTCCTTTTTTTGTCTTCTAATTTCTCTCTTCAAATTCCTCAAAAATTATTGA
TGGAGAAATCTGTTTATTCATCCACTCCACAATTCCCTCACTCATTGCCTTCCTTTCCCAGCTCCGCCGCCGCTGAAAGTGGCTGGACCGCCTATTTGGACGACCCCTCC
GACGACGACACCTACAGTACTTTCCCCACCTCCTCCTTGCTCTCTGACGCCGCTTCTCACGCTGCATGCCAATTCTCCGCCGCCGCCGACCCTCCACCTCCGCTCACCGA
CCACCTCAAAATCCCGACCAAGTTGATTCTCAAGCCTAAACAAACTCACTTTTTTGTCGATACTTCTCTTGAAGATACTGCCAGTTCTCCTGATAATAGCCCCAAGGCTT
CACACAAGTTGCTGGTTTGGGGCCGTTCGATGGGAATAATTATCGAAGAAAAAGGAAATGAACAGAAATATAGAGGAGATCATGAAAGAAAATTGGAGATGAGTTTTAAA
AGGAAGGCTACTGAATATACAGACTTGAAAAAAAGAGGATTGTGTTTGGTTCCTTTGTCCATGTTTGCAAATTATTTGGATTAGTTCAGAGAATAAGATACTTATTAGGA
TCGATATTCGATCTTCCACCTCTCACAATTGTCGAGGTGTCAAATTCTAAAACAAAGAAAAGTTTGTATATGATAGTGAAGATTATAGCCTTTGTAAGTAGCAATCTGCC
CAATTTGGGTAAGATTACAAGCATGGCTTTTATAGTCGGCTTATATGTAAAATTGTAAATTTAATTCATAGTCAGTTTACTTACTAATTTAGCAAGTCATTTTTTT
Protein sequenceShow/hide protein sequence
MEKSVYSSTPQFPHSLPSFPSSAAAESGWTAYLDDPSDDDTYSTFPTSSLLSDAASHAACQFSAAADPPPPLTDHLKIPTKLILKPKQTHFFVDTSLEDTASSPDNSPKA
SHKLLVWGRSMGIIIEEKGNEQKYRGDHERKLEMSFKRKATEYTDLKKRGLCLVPLSMFANYLD