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Lsi10G001570 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G001570
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionB box-type domain-containing protein
Genome locationchr10:2518473..2518865
RNA-Seq ExpressionLsi10G001570
SyntenyLsi10G001570
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042428.1 Zinc finger protein CONSTANS-LIKE 14 [Cucumis melo var. makuwa]1.3e-6186.33Show/hide
Query:  MCRGVEEGN--------HGHGHGGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT
        MCRGVEEGN        HGHG GGCR+S V +KG VSAAG +MCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILC+VCQNLTQKYLMGT
Subjt:  MCRGVEEGN--------HGHGHGGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT

Query:  STEVLLPTIITCTKANDC-NNGNLNTCCSVMLKRPFLFL
        STEVLLPTII CTKANDC NNGNLNTCCSVMLKRPFLFL
Subjt:  STEVLLPTIITCTKANDC-NNGNLNTCCSVMLKRPFLFL

KAG6570870.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]7.1e-4978.2Show/hide
Query:  MCRGVEEGNHGHGHGGCRRSTVAEKGGVSAAGA-VMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLP
        MCRGV E      HGGCR  + AEKGG SA GA VMCELC+S+ASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLT KYLMGTST+VLLP
Subjt:  MCRGVEEGNHGHGHGGCRRSTVAEKGGVSAAGA-VMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLP

Query:  TIITCTK-ANDCN-NGNLNTCCSVMLKRPFLFL
        TI+TC +  NDCN N NL+TCCSV LK P LFL
Subjt:  TIITCTK-ANDCN-NGNLNTCCSVMLKRPFLFL

KGN63276.1 hypothetical protein Csa_022167 [Cucumis sativus]2.4e-6087.97Show/hide
Query:  MCRGVEEGNHGHGHG--GCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLL
        MCRGVEEGNHGH HG  GCR+S V +KG VSAAG VMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLL
Subjt:  MCRGVEEGNHGHGHG--GCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLL

Query:  PTIITCTKANDC-NNGNLNTCCSVMLKRPFLFL
        PTII C +ANDC NNGN N CCSVM KRPFLFL
Subjt:  PTIITCTKANDC-NNGNLNTCCSVMLKRPFLFL

TYK13446.1 Zinc finger protein CONSTANS-LIKE 14 [Cucumis melo var. makuwa]1.5e-6287.05Show/hide
Query:  MCRGVEEGNHGHGH--------GGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT
        MCRGVEEGNHGHGH        GGCR+S V +KG VSAAG +MCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILC+VCQNLTQKYLMGT
Subjt:  MCRGVEEGNHGHGH--------GGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT

Query:  STEVLLPTIITCTKANDC-NNGNLNTCCSVMLKRPFLFL
        STEVLLPTII CTKANDC NNGNLNTCCSVMLKRPFLFL
Subjt:  STEVLLPTIITCTKANDC-NNGNLNTCCSVMLKRPFLFL

XP_022986418.1 B-box domain protein 30-like [Cucurbita maxima]4.2e-4978.95Show/hide
Query:  MCRGVEEGNHGHGHGGCRRSTVAEKGGVSAAGA-VMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLP
        MCRGV E      HGGCR  + AEKGG SA GA VMCELCNS+ASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILC+VCQNLT KYLMGTST+VLLP
Subjt:  MCRGVEEGNHGHGHGGCRRSTVAEKGGVSAAGA-VMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLP

Query:  TIITCTK-ANDCN-NGNLNTCCSVMLKRPFLFL
        TI+TC +  NDCN N NLNTCCSV LK P LFL
Subjt:  TIITCTK-ANDCN-NGNLNTCCSVMLKRPFLFL

TrEMBL top hitse value%identityAlignment
A0A0A0LTB0 B box-type domain-containing protein1.1e-6087.97Show/hide
Query:  MCRGVEEGNHGHGHG--GCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLL
        MCRGVEEGNHGH HG  GCR+S V +KG VSAAG VMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLL
Subjt:  MCRGVEEGNHGHGHG--GCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLL

Query:  PTIITCTKANDC-NNGNLNTCCSVMLKRPFLFL
        PTII C +ANDC NNGN N CCSVM KRPFLFL
Subjt:  PTIITCTKANDC-NNGNLNTCCSVMLKRPFLFL

A0A2C9UPR0 B box-type domain-containing protein4.7e-3862.12Show/hide
Query:  MCRGVEEGNHGHGHGGCRRSTVAEKG-GVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLP
        MCRGVEE +H HG   CR+    E G G   +  V CELC S+ASLYCQAD+A+LCRKCDKWVHGANFLA RHIRC LCN CQNLTQ+YL+G STE++LP
Subjt:  MCRGVEEGNHGHGHGGCRRSTVAEKG-GVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLP

Query:  TIITC-TKANDCNNGNLNTCCSVMLKRPFLFL
        TI++   +   CN  N +  CS  LK PFLFL
Subjt:  TIITC-TKANDCNNGNLNTCCSVMLKRPFLFL

A0A5A7TI11 Zinc finger protein CONSTANS-LIKE 146.1e-6286.33Show/hide
Query:  MCRGVEEGN--------HGHGHGGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT
        MCRGVEEGN        HGHG GGCR+S V +KG VSAAG +MCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILC+VCQNLTQKYLMGT
Subjt:  MCRGVEEGN--------HGHGHGGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT

Query:  STEVLLPTIITCTKANDC-NNGNLNTCCSVMLKRPFLFL
        STEVLLPTII CTKANDC NNGNLNTCCSVMLKRPFLFL
Subjt:  STEVLLPTIITCTKANDC-NNGNLNTCCSVMLKRPFLFL

A0A5D3CSP7 Zinc finger protein CONSTANS-LIKE 147.2e-6387.05Show/hide
Query:  MCRGVEEGNHGHGH--------GGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT
        MCRGVEEGNHGHGH        GGCR+S V +KG VSAAG +MCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILC+VCQNLTQKYLMGT
Subjt:  MCRGVEEGNHGHGH--------GGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT

Query:  STEVLLPTIITCTKANDC-NNGNLNTCCSVMLKRPFLFL
        STEVLLPTII CTKANDC NNGNLNTCCSVMLKRPFLFL
Subjt:  STEVLLPTIITCTKANDC-NNGNLNTCCSVMLKRPFLFL

A0A6J1JGF8 B-box domain protein 30-like2.0e-4978.95Show/hide
Query:  MCRGVEEGNHGHGHGGCRRSTVAEKGGVSAAGA-VMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLP
        MCRGV E      HGGCR  + AEKGG SA GA VMCELCNS+ASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILC+VCQNLT KYLMGTST+VLLP
Subjt:  MCRGVEEGNHGHGHGGCRRSTVAEKGGVSAAGA-VMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLP

Query:  TIITCTK-ANDCN-NGNLNTCCSVMLKRPFLFL
        TI+TC +  NDCN N NLNTCCSV LK P LFL
Subjt:  TIITCTK-ANDCN-NGNLNTCCSVMLKRPFLFL

SwissProt top hitse value%identityAlignment
O82256 Zinc finger protein CONSTANS-LIKE 131.8e-0734.04Show/hide
Query:  MCELCNSKASL-YCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIITCTKANDCNNGNLNTCCSVMLKRPF
        +C+ C+S  +L YC+AD A LC  CDK VH AN L  +H R +LC+ C          T   VL           +C+  +     S+  +RPF
Subjt:  MCELCNSKASL-YCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIITCTKANDCNNGNLNTCCSVMLKRPF

Q1G3I2 B-box domain protein 308.5e-2142.42Show/hide
Query:  MCRGVE-EGNHGHGHGGCRR-STVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLL
        MCRG E E      +GGC+R  T + K  VS      CELC   A++YC+AD A+LCRKCD+WVH ANFLA RH+R ++C  C+ LT++ L+G +  V+L
Subjt:  MCRGVE-EGNHGHGHGGCRR-STVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLL

Query:  PTIITCTKANDCNNGNLNTCCSVMLKRPFLFL
        P I    +  + ++ +         K PF+FL
Subjt:  PTIITCTKANDCNNGNLNTCCSVMLKRPFLFL

Q96502 Zinc finger protein CONSTANS-LIKE 24.1e-0741.79Show/hide
Query:  EKGGVSAAGAVMCELCNSKA-SLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYL
        E+   S   A  C+ C S A ++YC+AD AYLC  CD  VH AN +A RH R  +C  C++    +L
Subjt:  EKGGVSAAGAVMCELCNSKA-SLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYL

Q9LJB7 B-box zinc finger protein 321.5e-1238.82Show/hide
Query:  CELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIITCTKANDCNNGNLNTCCS
        CELC ++A L+C AD A+LCR CD   H +NFL  RH R ++C  C++LTQ ++ G       P +    +   C+  + ++CCS
Subjt:  CELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIITCTKANDCNNGNLNTCCS

Q9LRM4 B-box domain protein 315.5e-2050Show/hide
Query:  MCRGV--EEGNHGHGHGGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT-STEVL
        MCRG+  EE     G GGCR  ++  +  V     V CELC+  AS++C+AD A+LCRKCD+WVHGANFLA RH+R +LC  CQ LT++ L+G     V+
Subjt:  MCRGV--EEGNHGHGHGGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT-STEVL

Query:  LPTIIT
        LP++ T
Subjt:  LPTIIT

Arabidopsis top hitse value%identityAlignment
AT3G21150.1 B-box 321.0e-1338.82Show/hide
Query:  CELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIITCTKANDCNNGNLNTCCS
        CELC ++A L+C AD A+LCR CD   H +NFL  RH R ++C  C++LTQ ++ G       P +    +   C+  + ++CCS
Subjt:  CELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIITCTKANDCNNGNLNTCCS

AT3G21890.1 B-box type zinc finger family protein3.9e-2150Show/hide
Query:  MCRGV--EEGNHGHGHGGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT-STEVL
        MCRG+  EE     G GGCR  ++  +  V     V CELC+  AS++C+AD A+LCRKCD+WVHGANFLA RH+R +LC  CQ LT++ L+G     V+
Subjt:  MCRGV--EEGNHGHGHGGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT-STEVL

Query:  LPTIIT
        LP++ T
Subjt:  LPTIIT

AT4G15248.1 B-box type zinc finger family protein6.1e-2242.42Show/hide
Query:  MCRGVE-EGNHGHGHGGCRR-STVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLL
        MCRG E E      +GGC+R  T + K  VS      CELC   A++YC+AD A+LCRKCD+WVH ANFLA RH+R ++C  C+ LT++ L+G +  V+L
Subjt:  MCRGVE-EGNHGHGHGGCRR-STVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLL

Query:  PTIITCTKANDCNNGNLNTCCSVMLKRPFLFL
        P I    +  + ++ +         K PF+FL
Subjt:  PTIITCTKANDCNNGNLNTCCSVMLKRPFLFL

AT4G27310.1 B-box type zinc finger family protein3.0e-1340Show/hide
Query:  CELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIITCTKANDCNNGNLNTCCS
        C+LCN  A +YC++D A LC  CD  VHGANFL  +H RC+LC+ CQ+LT     G           +C    +   G  N   S
Subjt:  CELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIITCTKANDCNNGNLNTCCS

AT5G54470.1 B-box type zinc finger family protein8.8e-1340.48Show/hide
Query:  GAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIITCTKANDCNNGNL
        G   CELC   A +YC++D A LC  CD  VHGANFL  +H+RC+LC+ CQ+ T     G +    +    +C      NN +L
Subjt:  GAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIITCTKANDCNNGNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAGAGGTGTGGAAGAGGGAAACCATGGTCACGGTCACGGTGGTTGCCGGCGGTCTACGGTGGCTGAGAAGGGTGGTGTTTCGGCAGCGGGGGCGGTGATGTGCGA
GCTCTGCAACTCGAAGGCTTCATTGTACTGCCAAGCAGATGATGCATATTTATGTAGGAAATGTGACAAATGGGTTCATGGTGCGAATTTCTTAGCTCTCAGGCATATTA
GATGCATTCTCTGTAATGTTTGTCAAAACCTTACACAAAAATATCTCATGGGAACTTCAACTGAGGTTCTTCTCCCTACCATCATCACTTGCACCAAAGCTAATGACTGT
AACAATGGCAATCTCAACACATGTTGTTCAGTAATGCTCAAAAGGCCTTTTCTCTTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTAGAGGTGTGGAAGAGGGAAACCATGGTCACGGTCACGGTGGTTGCCGGCGGTCTACGGTGGCTGAGAAGGGTGGTGTTTCGGCAGCGGGGGCGGTGATGTGCGA
GCTCTGCAACTCGAAGGCTTCATTGTACTGCCAAGCAGATGATGCATATTTATGTAGGAAATGTGACAAATGGGTTCATGGTGCGAATTTCTTAGCTCTCAGGCATATTA
GATGCATTCTCTGTAATGTTTGTCAAAACCTTACACAAAAATATCTCATGGGAACTTCAACTGAGGTTCTTCTCCCTACCATCATCACTTGCACCAAAGCTAATGACTGT
AACAATGGCAATCTCAACACATGTTGTTCAGTAATGCTCAAAAGGCCTTTTCTCTTTTTGTGA
Protein sequenceShow/hide protein sequence
MCRGVEEGNHGHGHGGCRRSTVAEKGGVSAAGAVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIITCTKANDC
NNGNLNTCCSVMLKRPFLFL