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Lsi10G001780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G001780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:2887729..2887977
RNA-Seq ExpressionLsi10G001780
SyntenyLsi10G001780
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571236.1 hypothetical protein SDJN03_30151, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1767.82Show/hide
Query:  HLCLLSLLLLPLLLPATSNFLVHGRALRPDATAEIGQRDGSDAREFKLKPKGGGGGGS-------DLSNQRVFTLASGPSRRGDGHK
        HLCLLSLLLLPLLLPATS  L+H RAL+ +          SDA EFKLKPK GGGGG+       D+SNQRVFTLASGPSRRGDGHK
Subjt:  HLCLLSLLLLPLLLPATSNFLVHGRALRPDATAEIGQRDGSDAREFKLKPKGGGGGGS-------DLSNQRVFTLASGPSRRGDGHK
KGN63303.1 hypothetical protein Csa_022628 [Cucumis sativus]7.2e-2379.78Show/hide
Query:  MRHLCLLSLLLLPLLLP-ATSNFLVHGRALRPDATAEIGQRDGSDAREFKLKPK----GG--GGGGSDLSNQRVFTLASGPSRRGDGHK
        MRHLCLLSLLLLPLLLP  TSN LVHGRAL+PDAT EI    GS A EFKLKPK    GG  GGGGSD SNQRVFTLASGPSRRGDGHK
Subjt:  MRHLCLLSLLLLPLLLP-ATSNFLVHGRALRPDATAEIGQRDGSDAREFKLKPK----GG--GGGGSDLSNQRVFTLASGPSRRGDGHK
TrEMBL top hitse value%identityAlignment
A0A0A0LNA9 Uncharacterized protein3.5e-2379.78Show/hide
Query:  MRHLCLLSLLLLPLLLP-ATSNFLVHGRALRPDATAEIGQRDGSDAREFKLKPK----GG--GGGGSDLSNQRVFTLASGPSRRGDGHK
        MRHLCLLSLLLLPLLLP  TSN LVHGRAL+PDAT EI    GS A EFKLKPK    GG  GGGGSD SNQRVFTLASGPSRRGDGHK
Subjt:  MRHLCLLSLLLLPLLLP-ATSNFLVHGRALRPDATAEIGQRDGSDAREFKLKPK----GG--GGGGSDLSNQRVFTLASGPSRRGDGHK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCATCTTTGCCTCCTCTCTCTGCTTCTCTTGCCCTTGCTTCTTCCCGCCACCTCGAATTTCTTAGTCCACGGAAGAGCGCTCCGGCCCGATGCCACGGCCGAGAT
CGGGCAGCGGGATGGGTCCGATGCCCGTGAATTCAAATTGAAACCGAAGGGTGGTGGTGGTGGTGGTTCCGACCTGTCGAATCAGCGAGTGTTTACGTTGGCGTCAGGAC
CGAGCAGGAGAGGAGATGGGCACAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCATCTTTGCCTCCTCTCTCTGCTTCTCTTGCCCTTGCTTCTTCCCGCCACCTCGAATTTCTTAGTCCACGGAAGAGCGCTCCGGCCCGATGCCACGGCCGAGAT
CGGGCAGCGGGATGGGTCCGATGCCCGTGAATTCAAATTGAAACCGAAGGGTGGTGGTGGTGGTGGTTCCGACCTGTCGAATCAGCGAGTGTTTACGTTGGCGTCAGGAC
CGAGCAGGAGAGGAGATGGGCACAAGTGA
Protein sequenceShow/hide protein sequence
MRHLCLLSLLLLPLLLPATSNFLVHGRALRPDATAEIGQRDGSDAREFKLKPKGGGGGGSDLSNQRVFTLASGPSRRGDGHK