| GenBank top hits | e value | %identity | Alignment |
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| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 1.2e-261 | 93.32 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY ND RLGQ QVS TK+VVIAK S++FSPSYP SNR+ QCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT KKVPVTCSGVSARQRRMSSKRKIQ+KHVFMAQPKISKQL+P+ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+ISR ELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| XP_004151855.1 RNA polymerase sigma factor sigA [Cucumis sativus] | 4.2e-262 | 94.31 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNS-QCIKAVKEHVDTPSSPTAEPWLHNTTIWE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYA ND RLGQTQVS +K+VVIAKSS+NFSP YPSSNR+S QCIKAVKEHV+TPSSP AEPW HNTT WE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNS-QCIKAVKEHVDTPSSPTAEPWLHNTTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
DEET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+ KTLKKVPVTCSGVSARQRRMSSKRKIQ+KHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
GLLSEELLSHAEVVRLSKKIKVGL LEERKTRLK+RLGCEPSEDQLAISLKISR ELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAMLLKH
Subjt: RKMEAMLLKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 4.2e-270 | 96.47 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNS-QCIKAVKEHVDTPSSPTAEPWLHNTTIWE
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYA ND RLGQTQVSPTK+VVIAKSS+NFSPSYP SNR+S QCIKAVKEHV+TPSSPTAEPWL NTTIWE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNS-QCIKAVKEHVDTPSSPTAEPWLHNTTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KTLKKVPVTCSGVSARQRRMSSKRKIQ+KHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISR ELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAML+KH
Subjt: RKMEAMLLKH
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| XP_022148631.1 RNA polymerase sigma factor sigA [Momordica charantia] | 3.2e-262 | 93.71 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYA ND RLGQ+QVSPTK+VVIAKSS+NFSPS+PSSNR++QCIKAVKEHVDTPSSPT EPWL N+T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTV TDA RG+T KKVPVTCSGVSARQRRMSSKRKIQ+K+ FM QPKISKQLR TISPELLQ RLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 3.5e-277 | 98.23 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILY NND RLGQTQVSPTK+VVIAKSS+NFSPSYPSSNR+SQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT KKVPVTCSGVSARQRRMSSKRKIQ+KHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR ELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0LQR2 RNA_pol_sigma70 domain-containing protein | 2.0e-262 | 94.31 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNS-QCIKAVKEHVDTPSSPTAEPWLHNTTIWE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYA ND RLGQTQVS +K+VVIAKSS+NFSP YPSSNR+S QCIKAVKEHV+TPSSP AEPW HNTT WE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNS-QCIKAVKEHVDTPSSPTAEPWLHNTTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
DEET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+ KTLKKVPVTCSGVSARQRRMSSKRKIQ+KHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
GLLSEELLSHAEVVRLSKKIKVGL LEERKTRLK+RLGCEPSEDQLAISLKISR ELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAMLLKH
Subjt: RKMEAMLLKH
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| A0A1S4E4N5 RNA polymerase sigma factor sigA | 2.0e-270 | 96.47 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNS-QCIKAVKEHVDTPSSPTAEPWLHNTTIWE
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYA ND RLGQTQVSPTK+VVIAKSS+NFSPSYP SNR+S QCIKAVKEHV+TPSSPTAEPWL NTTIWE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNS-QCIKAVKEHVDTPSSPTAEPWLHNTTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KTLKKVPVTCSGVSARQRRMSSKRKIQ+KHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISR ELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAML+KH
Subjt: RKMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 2.0e-270 | 96.47 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNS-QCIKAVKEHVDTPSSPTAEPWLHNTTIWE
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYA ND RLGQTQVSPTK+VVIAKSS+NFSPSYP SNR+S QCIKAVKEHV+TPSSPTAEPWL NTTIWE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNS-QCIKAVKEHVDTPSSPTAEPWLHNTTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KTLKKVPVTCSGVSARQRRMSSKRKIQ+KHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISR ELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAML+KH
Subjt: RKMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 1.6e-262 | 93.71 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYA ND RLGQ+QVSPTK+VVIAKSS+NFSPS+PSSNR++QCIKAVKEHVDTPSSPT EPWL N+T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTV TDA RG+T KKVPVTCSGVSARQRRMSSKRKIQ+K+ FM QPKISKQLR TISPELLQ RLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 3.8e-261 | 93.12 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY ND RLGQ QVS TK VVIAK S++FSPSY SNR+ QCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT KKVPVTCSGVSARQRRMSSKRKIQ+KHVFMAQPKISKQL+P ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEE KTRLKERL C+PSE+QLAISL+ISR ELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O24629 RNA polymerase sigma factor sigA | 1.7e-189 | 69.44 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWE--
MATAA+IGL KRLL+SS Y+SD TEK L + ND Q ++ TK+ + AK +SN+SPS+PSSNR++Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWE--
Query: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQN
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T+ KK+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISR EL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEK
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
Query: LKKAAKTRKMEAMLLKH
LK AA+ RKMEAM+LK+
Subjt: LKKAAKTRKMEAMLLKH
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| P26683 RNA polymerase sigma factor SigA | 5.0e-40 | 34.24 | Show/hide |
Query: KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMS
K +K R T S + ++ ++ Y++ + LL E + L++KI L LE + RL E+L +P + + A ++++ R R+ A++K+ S
Subjt: KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMS
Query: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
N+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
Query: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-E
IA + M+ +K+ K+A IS + +E L GET ++ N +L+ ++ K+++ +L RER+++RL +GLD+
Subjt: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-E
Query: CLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: CLTWEEISKRIGLSRERVRQVGLVALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 8.5e-40 | 34.44 | Show/hide |
Query: AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAM
A K ++R T + ++ ++ Y++ + LL E + L+++I LALE + L E+L PS+ + A ++ E R R+ A++K+
Subjt: AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAM
Query: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLD
SN+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLD
Query: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-
IA + M+ +K+ K+A IS + +E L GET +A N +L+ ++ +++ TL RER+++RL +GLD+
Subjt: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-
Query: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
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| Q03065 RNA polymerase sigma-B factor | 1.2e-38 | 33.11 | Show/hide |
Query: LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLR
LLSH + + +++++ + + K L E+L EP+ + A +++ L ++ + +A++K+ +N+RLV+SIA++Y E DL+Q G +GL R
Subjt: LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLR
Query: GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
G+EKFD + G+K STY YWWIRQG++RA+ + SRT+RLP H+ ++L I+ + L +K G + IA++LN+ +++ + + + SLD
Subjt: GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
Query: LNGLPGETH-HSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK
G +T + D+ + +P + +L +++ L+ L +++E++ L GL C LT +IS+R+G+SRERVRQV AL L++
Subjt: LNGLPGETH-HSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK
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| Q0J7T6 RNA polymerase sigma factor sigA | 8.8e-130 | 50.66 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSD-FTEKILY-------------ANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVD-----
M AT A+IGL A RLL++S +D +K+ + + + K +A SP + +Q ++A++ H
Subjt: MMATAAIIGLGAAKRLLNSSSYYSD-FTEKILY-------------ANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVD-----
Query: TPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDAPRGKTLK-KVPVTCSGVSARQRRMSSKRKIQNKHVFMAQP
P P P + DL+ ++EA++LLQ+SMLEKQW L F+ + T K V V S VSARQRRMS +R+ + K
Subjt: TPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDAPRGKTLK-KVPVTCSGVSARQRRMSSKRKIQNKHVFMAQP
Query: KISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNV
+ +SPEL+Q+R + Y++G +S+ELL+H +VV LS KIK G+ L++++++LKE+LG EPS QLA SLKIS ELRSR+ E LARE L MSN+
Subjt: KISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNV
Query: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAE
RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK L+++GI P+++ IA
Subjt: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVNKL+N TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKTRKMEAML
GLSRERVRQVGL+A+EKLK AA+ + +EA+L
Subjt: GLSRERVRQVGLVALEKLKKAAKTRKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 8.7e-40 | 33.33 | Show/hide |
Query: KTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE
KT +P +G S +++R+ ++ N + + LR T S S +LL+ E LS I+ L LE +T L ER G +
Subjt: KTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE
Query: PSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR
P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L + SR
Subjt: PSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR
Query: TLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL---
+RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++ + N P E IAD P T IL
Subjt: TLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL---
Query: --KAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLL
+ +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK + ++ L+
Subjt: --KAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLL
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| AT1G64860.1 sigma factor A | 1.2e-190 | 69.44 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWE--
MATAA+IGL KRLL+SS Y+SD TEK L + ND Q ++ TK+ + AK +SN+SPS+PSSNR++Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWE--
Query: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQN
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T+ KK+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISR EL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEK
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
Query: LKKAAKTRKMEAMLLKH
LK AA+ RKMEAM+LK+
Subjt: LKKAAKTRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 4.9e-176 | 68.32 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWE--
MATAA+IGL KRLL+SS Y+SD TEK L + ND Q ++ TK+ + AK +SN+SPS+PSSNR++Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSPSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWE--
Query: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQN
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T+ KK+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISR EL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.5e-36 | 32.59 | Show/hide |
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T D+ +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKAAKTRKMEA
+LK+ + + A
Subjt: KLKKAAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 5.4e-34 | 32.84 | Show/hide |
Query: SSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSR
S KR+ + + + ++ + E + V G LS E V+L +K G LE T ++E + +++ L R + +
Subjt: SSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSR
Query: VMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E +
Subjt: VMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
Query: NAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREI
A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ +L+ +L RE +
Subjt: NAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREI
Query: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
+ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Subjt: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
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