; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G002120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G002120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationchr10:3477849..3482226
RNA-Seq ExpressionLsi10G002120
SyntenyLsi10G002120
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652335.1 hypothetical protein Csa_022102 [Cucumis sativus]1.8e-10988.98Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT
        +QSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT

Query:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK
        KTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAA  KT  K
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK

XP_004151849.1 binding partner of ACD11 1 [Cucumis sativus]7.9e-11089.37Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT

Query:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK
        KTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAA  KT  K
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK

XP_008462804.1 PREDICTED: binding partner of ACD11 1-like [Cucumis melo]1.5e-10888.58Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT

Query:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK
        KTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAA  KT  K
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK

XP_038881171.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]6.1e-11089.76Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLATEREIH+               EQG+SKTAFVTFRDPKALEIALLLSGATIVDQIVSIS AENHVPRREMQEVRVVDNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT

Query:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNFPS EDSASQPSSGKMYVNRAQ VVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQ LHVSD
Subjt:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK
        KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA  KT  K
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK

XP_038902413.1 binding partner of ACD11 1-like [Benincasa hispida]2.0e-10891.67Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSI+PAENHVPRREMQEVRVVDNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT

Query:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTEN+ PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIS VNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV
        KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV

TrEMBL top hitse value%identityAlignment
A0A0A0LNE8 RRM domain-containing protein3.8e-11089.37Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT

Query:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK
        KTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAA  KT  K
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK

A0A1S3CIA3 binding partner of ACD11 1-like7.2e-10988.58Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT

Query:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK
        KTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAA  KT  K
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK

A0A5D3BPG7 Binding partner of ACD11 1-like7.2e-10988.58Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT
        MQSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT

Query:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK
        KTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAA  KT  K
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK

A0A6J1GFF4 binding partner of ACD11 11.8e-10787.01Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT
        MQSQTRTVQ ++VSDLATEREIH+               EQG+SKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAEN+VPRREMQEVR VDNAA LT
Subjt:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT

Query:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNFPSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK
        KTMAAIFAAERK+NDTGSAVKTSKYVT+GAAWLNGAFGKVAKAGQAA  KT  K
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK

A0A6J1IKN1 binding partner of ACD11 11.8e-10787.01Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT
        MQSQTRTVQ ++VSDLATEREIH+               EQG+SKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAEN+VPRREMQEVR VDNAA LT
Subjt:  MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLT

Query:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNFPSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK
        KTMAAIFAAERK+NDTGSAVKTSKYVT+GAAWLNGAFGKVAKAGQAA  KT  K
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAA-AKTMPK

SwissProt top hitse value%identityAlignment
Q9LFD5 Binding partner of ACD11 13.8e-3839.53Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIH------------DEQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        M SQ R+V+V ++S  ATE +I             D Q    +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                    
Subjt:  MQSQTRTVQVKHVSDLATEREIH------------DEQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
           P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V+++T 
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAK-AGQAAAKTMPKEE
        +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+ AG+   KT  K E
Subjt:  AAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAK-AGQAAAKTMPKEE

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.7e-4142.68Show/hide
Query:  TVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNF
        TV+V +VS  AT+R++ +               E   +K A+VTF+D +  E A+LLSGATIVD  V +S A ++    E          A L P     
Subjt:  TVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNF

Query:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI
           +DS   P +G   + +A++VV+++LAKG  +G+DA+ KAK+ DEKH+LT++ASAKV SFD+++G T+K+  G  VV EKV+ VDQK  VS+KT +AI
Subjt:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI

Query:  FAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQ
         AAE+ +++ GSA+  ++YV  GA W+ GAF KVAKA +
Subjt:  FAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQ

AT5G16840.1 binding partner of acd11 12.7e-3939.53Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIH------------DEQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        M SQ R+V+V ++S  ATE +I             D Q    +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                    
Subjt:  MQSQTRTVQVKHVSDLATEREIH------------DEQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
           P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V+++T 
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAK-AGQAAAKTMPKEE
        +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+ AG+   KT  K E
Subjt:  AAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAK-AGQAAAKTMPKEE

AT5G16840.2 binding partner of acd11 11.0e-3838.58Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHD-------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPT
        M SQ R+V+V ++S  ATE +I +             +     +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                   
Subjt:  MQSQTRTVQVKHVSDLATEREIHD-------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPT

Query:  ENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKT
            P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V+++T
Subjt:  ENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKT

Query:  MAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAK-AGQAAAKTMPKEE
         +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+ AG+   KT  K E
Subjt:  MAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAK-AGQAAAKTMPKEE

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein9.1e-8068Show/hide
Query:  TRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTEN
        TR+VQV +VSDLATEREIH+               E G+S+ AFVTF DPKALEIALLLSGATIVDQIV+I+ AEN+V RRE QEVR++DNA  L   E+
Subjt:  TRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTEN

Query:  NFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMA
           + +   +   + + YV++AQ+VVATVLAKGSA+GQDA+NKAKAFDEKH+L A+ASAKV SFD+RVGLTEKL+VGIS VNEKVKSVDQKL VSDKTMA
Subjt:  NFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMA

Query:  AIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQ-AAAKTMPK
        AIFAAERKLNDTGSAVK+S+YVTAGAAW +GAF KVA+ GQ A +KT  K
Subjt:  AIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQ-AAAKTMPK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.0e-3838.75Show/hide
Query:  TVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENH-VPRREMQEVRVVDNAACLTPTENN
        TV+V +VS  ATER++ +               E   SK A+VTF+D +  E A+LL+G+TIVD  V+++ + ++ +P   +  +  +  +      +++
Subjt:  TVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENH-VPRREMQEVRVVDNAACLTPTENN

Query:  FPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAA
         P+ ED +           +A++VV+ +++KG  +G+DA+ KAK+ DEKH+LT++ASA+V SFD+R+G TEK+  G +VV+EKVK VDQK  V++KT +A
Subjt:  FPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAA

Query:  IFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQ
        I AAE+ +++ GSA+  ++YV  GA W+ GAF +V+KA +
Subjt:  IFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGATGAACAAGGGGAATCCAAGACTGCGTTCGTGACATTTAG
AGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACTATTGTAGATCAGATCGTGAGCATATCTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGG
AAGTACGGGTTGTGGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTTTCCTAGCATTGAGGATTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGA
GCACAAGAAGTAGTTGCAACTGTGCTAGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTTGACGAAAAACATCGGTTAACAGCTAGTGCATC
TGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTAACAGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAAACTTCACGTTT
CAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGTTCTGCTGTCAAAACAAGCAAGTATGTGACAGCAGGAGCTGCTTGGCTAAATGGT
GCTTTTGGCAAAGTCGCAAAAGCAGGGCAGGCAGCAGCCAAAACCATGCCAAAAGAAGAGAAAGCTCCCTAA
mRNA sequenceShow/hide mRNA sequence
TGGAAAGTGAAGTTTCCTGACATTACTAATTTTCCTGCTCTTTATCTCTCCCACGCTTTGTCTGGTGATACTCCCTTCTTTCAAATTGCTTCCAAGCTCCAACCTCTACA
ACTTCCTCTTTCTCCAAGAAATTCGTCGAATTCTTCGATCATTAGCTATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAG
ATTCACGATGAACAAGGGGAATCCAAGACTGCGTTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACTATTGTAGATCAGATCGT
GAGCATATCTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTTTCCTAGCATTG
AGGATTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTAGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAAC
AAGGCAAAAGCATTTGACGAAAAACATCGGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTAACAGTTGGGATATC
AGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAAACTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGTTCTGCTG
TCAAAACAAGCAAGTATGTGACAGCAGGAGCTGCTTGGCTAAATGGTGCTTTTGGCAAAGTCGCAAAAGCAGGGCAGGCAGCAGCCAAAACCATGCCAAAAGAAGAGAAA
GCTCCCTAA
Protein sequenceShow/hide protein sequence
MQSQTRTVQVKHVSDLATEREIHDEQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYVNR
AQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNG
AFGKVAKAGQAAAKTMPKEEKAP